Triticum aestivum (bread wheat): 123044268
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Entry
123044268 CDS
T07757
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123044268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123044268
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123044268
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
PRP4
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Vps41
eIF2A
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
123044268
NCBI-ProteinID:
XP_044322900
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Position
2B:188674626..188680135
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AA seq
513 aa
AA seq
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MENPRPLPPAITPPMAPLPVHPPIAPVPAPPRAPAPTSAAAGGGDDDEVGYEVSDDHRAA
RERHERAVQELLQRRRAYVMAVPTNDSAVRARLRRLGEPIALFGEGAMERRDRLRALMAR
LEAEGQFDRLLRAQEDEQGAPGDDDEGTEQIKYPFFTEGTNQLLQARVDIAMYSLPRAKA
RIERAKRRLADPDEDPEAEAALAVKQAADFALERSEIGDDRPLTGCSFSRDASMLATSSW
SGIVKVWSMPQITKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNSDGSLLMSFD
GHLDRLARLAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGHSRSVYGVSFHPDGSLA
ASCGFDASARVWDLRSGRLYCTLIGHVKPVLGVSFSPNGHLVATASEDNFCRIWDLRTRQ
MLYSIPAHKSLISHVKFEPQEGYYLATSSYDTKAALWSTRDYKPIKSLSGHESNVTSLDI
SGDGQQIATVSLDRTIKIWSCRGSARDDEMELD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccaggcccctgccccctgccatcacccctcccatggctcccctccccgtc
cacccacccatcgcccccgtccccgccccaccccgcgcccccgcccccacatccgccgct
gccggaggcggagacgatgacgaggtcggctacgaggtctccgacgaccaccgcgccgcg
cgggagcgccacgagcgcgccgtacaggagctcctgcagcgccgccgcgcctacgtcatg
gccgtgcccaccaacgactccgccgtgcgcgcgcgcctccgccgcctcggtgagcccatc
gcgctcttcggcgagggcgcgatggagcgccgcgaccgcctacgcgcgctcatggcccgc
ctcgaggccgagggccagttcgaccgcctcctccgcgcgcaggaggacgaacagggagcc
ccgggcgacgacgacgagggcacggagcagatcaagtacccgttcttcaccgaggggacc
aaccaactgctccaggcgcgcgttgacatcgccatgtactcactgccccgcgccaaggcc
aggatcgagagggccaagcgacgcctcgccgaccccgacgaggaccccgaggcagaggcc
gcccttgctgtgaaacaggcggcggacttcgcgcttgagcgcagcgagattggagatgac
cgcccgctcaccggctgctccttctcccgcgatgcctcaatgctcgccacaagctcctgg
agtgggatcgtcaaagtgtggagcatgccacagataaccaaaattgcaaccctgaaaggc
catacagaacgtgcaaccgatgttgccttctccccagtcgataactgcttagcgacagcc
tcagctgataaaactgccaaattgtggaacagcgatgggtcacttctgatgtcttttgat
ggtcacctggatcgtcttgcgcgccttgcttttcatccatctggaaagtaccttggtaca
gctagctttgacaagacctggagattgtgggacatcaacactggaactgaacttctactc
caggagggacatagcagaagtgtatatggtgtcagctttcacccagacggttctttagct
gcatcttgtgggtttgatgctagtgctcgagtttgggatttaaggtcaggaagattgtac
tgtaccctcattggacatgtcaaacctgtcctaggagtcagcttctcacctaatggtcat
ctggttgcaaccgcaagtgaagacaatttctgtcgaatatgggatttgaggaccagacaa
atgctatattctataccagcacataagagtctcatctcgcatgtgaaatttgaaccacag
gagggttattatttagcgacatcttcctatgacactaaagcagcgctatggtcaactcgg
gattacaaaccaattaaaagcttgtcaggccatgagtcaaacgttactagtctggatatt
agtggagatggacaacagattgcgactgtttcacttgatagaacgataaagatctggtca
tgcagaggcagcgcgcgggatgatgagatggagttggattaa
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