Triticum aestivum (bread wheat): 123044856
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Entry
123044856 CDS
T07757
Name
(RefSeq) DNA damage-binding protein 1-like isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123044856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123044856
03041 Spliceosome [BR:
taes03041
]
123044856
03036 Chromosome and associated proteins [BR:
taes03036
]
123044856
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123044856
Spliceosome [BR:
taes03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123044856
Complex B
123044856
Complex C
U2 SnRNP specific factors
123044856
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
123044856
TFTC complex
123044856
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
123044856
NCBI-ProteinID:
XP_044323659
LinkDB
All DBs
Position
2B:328078856..328103628
Genome browser
AA seq
1361 aa
AA seq
DB search
MESSASGDGASAMTAAVAAAAAVASSSSGPSTSASAFSAGVSGGASATHYLAKRVLHGSA
VQHVARGHFRSEHLWEIVLCKGTSLELVVVGEDGVLQSICEQSTFGIVKDVGVLDWRFKH
FGIWPEIEGKEILVLLSDSGKLSLLCFCCQMQRFIPIGNIELSKPGNMRDQLGRILAIDH
DSAWVAISAYEDAFAVVRVGRTQHVYGPNEEIVEKAKIVHAVYKTSDIRGTVWSMCFMRT
RCSMDEYYPVVAMIINRKGSDANDLSMYALAANDGGIQYLSGYSEPGPLALEIAEIPQLD
GFGLLFRAGDILIVDLRDPKDICCTIRISMTGSLVGEQISVEDSCRGLDVDDDVAACALL
ELRDSGNNIMMDDSYMAIDGADNPGSMKSRVICSWSWEPDAMRGQPRLIFCLDDGEFHIL
EFNWDTEGLKVLPERVHRGLPCKPLLWMDRGMIAGFVEMGDGMILHLEHGRLVHKSTVQN
VGPILDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGVTGLWTL
RMKRTDTYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPEVCTLACGLIADGLLVQIHS
KGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHDVVAVATSNPCCLYILRVRP
LSSLQYELYETQHVQLQYEVSCISIPEEDSRLRTSSSAFGGDFRKRKGNNSAAEVDVRMF
AVIGTHKPSVEVISLEPDEAFRLLSIGSISVNNALGAPVSGCIPENVRFVASERFYILAG
LRNGMLLRFESGTSKDQYLPVSFYKESFAPSLNTLLQLVAIRHIGITPVGLVPLRDSANS
DIIVLSDRSWLLYASRHSLAYSSISFLPASHVTPVSSVDCPSGLLFVAENCLHLVEMVHG
KRLNAQKFSVGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLSRFKCEL
GETAKCIQIVKIGSEQVLIVGTSKSTDRPMMPNGEAESSIKGRLIVLSLDTLGSPHECSS
FIPTSNLSSSSHTGSFPEIVGYANEEFSSNSMCSSPDDICYNQIQFEQIAGHLRSLTHVT
FTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKTYASQIA
AGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRRGSISVLSCPGL
EVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLPIGDEADPVLESAYNCVVASTLLGSV
FVMIPLTSEEHQLLQDVQERLSLHPLTAPILGNDHAEFRRRGIPSGVPSILDGDMLVQFL
ELTSEQQQTVLDDGSSVKAPRRSISVFQVMRMLERVHYALN
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctccgcctccggtgacggcgcctctgccatgacggctgctgttgctgcggca
gcagcggtggcgtcgtcctcatcgggcccctccacctctgcctccgccttctccgccggt
gtctcgggtggggcaagcgccacccactacctcgccaaacgcgtgctccatggcagcgcc
gtgcagcacgtcgcccggggccacttccgctcggagcacctttgggagatcgtcctctgc
aagggaacttcacttgaattagttgtggttggtgaggatggtgttttacagtcaatctgc
gagcaaagtacatttgggattgtaaaagatgttggtgtcttggactggcgctttaaacac
ttcggtatctggcctgagattgaagggaaagaaattctggttctactctctgattctgga
aagctttctcttctttgcttctgttgtcagatgcagaggtttattccaattggaaatatc
gagttatctaaaccaggaaatatgagggatcaactgggaagaattttggctatagaccac
gactctgcttgggttgctattagtgcgtacgaggatgcatttgctgttgtgcgtgttgga
aggactcagcatgtttatggtccaaatgaagaaattgtagagaaggcaaaaatcgtgcat
gctgtatataagaccagtgatatccgcggtacggtttggagcatgtgcttcatgaggact
cgctgctcgatggatgaatattacccagttgtagcaatgataattaacaggaagggctct
gatgcgaatgacttgtcaatgtatgcactagctgccaatgatggtggcatccagtaccta
tctggttactcagaacctggacctttggcgcttgagatcgcagaaattcctcagctggat
ggctttggacttctatttcgtgctggtgatattctaattgtggatcttagggacccaaag
gacatctgttgtaccattagaataagcatgacaggaagtctggttggagaacaaatcagt
gttgaagattcatgtcgaggattagatgttgatgacgatgttgctgcttgtgctttgcta
gaactgagagattctggaaataacataatgatggatgacagttacatggctattgacggt
gctgataacccaggaagcatgaaatcaagggttatttgctcatggagctgggagccggat
gccatgcgaggacaaccgaggctgatcttttgcttggatgatggagaatttcatattctg
gaatttaattgggatacggaaggattgaaggtattgcctgagcgtgtccataggggtttg
ccttgtaaacctcttttatggatggacagaggaatgatagcagggtttgtagagatggga
gatggaatgatccttcatcttgaacatggtagactggtgcataaaagtacagttcagaat
gtaggaccaatattagatttagcaattgctgactaccatggtgagaagcaggatcagttg
ttttcatgttgtggaatgtgcccggagggatcattgcgtgttataaggaatggtgttaat
gtggagaaacttctgaggactgaacctatttatcagggtgttactggtttgtggacgttg
agaatgaagagaactgatacatatcactcttttcttgtattggcatttgttgaggaaaca
agaatactatcagtaggactgagttttaatgacatcagtgatgctgtgggatttcagcct
gaggtttgcactttggcatgtggtttaatagctgatggtttacttgtgcaaattcacagc
aaaggcgtaaagctttgtttgcctacatcatatgctcaccctgagggcgccaccttaact
tctccagtttgtgttgactggtatcctgatgtcactatcagtgttggtgctgttggacat
gatgttgttgctgtcgctacatcaaatccttgttgcctatatattctcagggtcagacca
ttatcttcactccagtacgagttgtatgagacacagcatgtccaattgcaatatgaagta
tcttgcatatccattccggaggaggactcgagacttagaacgtcatcttctgcttttggt
ggtgattttaggaagagaaaagggaataattctgctgctgaagttgatgttcgcatgttt
gctgtcattggaactcataaaccttctgtggaagtcatctcattggaacctgatgaagca
tttaggctgctctctattgggtctatatcagtgaacaatgcgctcggtgctccagttagt
ggctgtatacctgaaaatgttcggtttgtagcatctgagaggttctacattctcgcaggt
ctaagaaatggcatgctactcaggtttgagtcaggaacaagcaaagaccagtatctccct
gtttccttttacaaggagtcttttgcaccttctcttaatactctccttcagttggttgct
ataaggcatattggaattacccctgtaggcttggtaccattgcgtgattcagctaattct
gatattattgttctcagtgataggtcttggctattatatgctagtagacacagcttggca
tattcatccatctcatttctgcctgcgtcccatgtgactccagtatcttctgtggattgc
cccagcggtctgctatttgttgcagagaactgtttacatttggttgaaatggttcatggc
aaaagattaaatgcacaaaagttttcagttggagggactccaaggaaagtgctataccac
agcgatagtagaacactgttggttatgagaactggtttaactggtgcatcatgttcttca
gatattgtccaaatagatcctaataatgggatcttgctttcccgattcaagtgtgaactt
ggtgaaactgcaaaatgcatccagattgtgaaaataggaagtgagcaagtgttaattgtt
gggacaagtaaatctactgaccggccgatgatgccaaatggcgaagcagaaagcagtatc
aaaggacgcctaattgttctaagcttggatactcttggaagtcctcatgagtgcagttca
tttattccgacttctaatttgagttcctcttctcatacgggctcattccctgaaattgtt
ggatatgcaaatgaagaattctctagcaacagcatgtgcagcagtcctgatgatatttgc
tacaatcagattcaatttgaacaaatagcaggacacctgagatcactgactcatgttacc
ttcactggtgcagttcttgctgtatatccatatctagaccgatatgtgttggcagcagct
ggtaatacgctttctgtatttggttttgtgaatgaaaatcctcatcgtatgaagaagtat
gccgtgagcagaacacgatttactattacttgtttgaagacatatgcatcacagattgca
gcgggtgattgtcgtgatggtgttctcttctattcttatcacgagaatcttaggaagttg
gaacttgtttatgctgatcctgctcaacgattggtgggtgatgttgtcctcttagactgt
gaaactgctgttgtgtcagatcgtcgtggtagcatatctgtattatcctgccctggactg
gaagtttctgaaagtccagaaaagaacttagctgtacaatgttcattttttatgggcgaa
atagctatgagcatccagaaggctgcatttaagtatcggctccctattggtgatgaggca
gacccagtgttggaatcagcttataactgcgttgtggcgagtactttgctggggagtgtt
tttgttatgattccgctcaccagtgaggagcatcaactgttgcaagatgtccaagaaaga
ctttcacttcacccgttgactgctccaatcttgggaaatgaccatgcagagtttcgtcga
cgtggtatcccgtcgggagtgccttcaattctggatggtgacatgctggtgcaattctta
gagctcaccagtgagcaacagcaaactgtacttgacgatgggtcttcagtaaaggcacca
cgcaggtctatctcagttttccaggtcatgcgaatgttggagcgggtccactatgcgctg
aactga
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integrated database retrieval system
