Triticum aestivum (bread wheat): 123046005
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Entry
123046005 CDS
T07757
Name
(RefSeq) endoribonuclease Dicer homolog 4-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123046005
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123046005
microRNA pathway
RISC loading complex
123046005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
DND1_DSRM
ResIII
PAZ
dsrm
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123046005
NCBI-ProteinID:
XP_044325203
LinkDB
All DBs
Position
2B:complement(554984996..555016812)
Genome browser
AA seq
1682 aa
AA seq
DB search
MCAFRISVSPTDSSSSPSSPPLTLQPPPRRPAVAPRGTQERERGEGEGAPLPREASAMGD
ISTAAASAEEREPQPKDPRTIARKYQLDLCKRALEENIIVYLGTGCGKTHIAVLLIYELG
HLIRKPRRDVCIFLAPTVPLVLQQATVIANSTNFRVQSYYGDGKNPRNHEDWETEMGESE
VLVMTPQILLHSLRHCFIKMDSIALLIFDECHHAQAHKRHPYAQIMKEFYDNDMVKPPRI
FGMTASPVIGKGGSNKLNYTKCINSLEELLHAKVCSVDNAELESVLAFPDMEVYTYVPLS
HSNLTVTYNKELDCSKLESERILRESLYDFKDSQKKLKSLGRLHGNLVFCLQELGSFGAL
QAAKAFLSFDGDVLDRKESDMNDNSTRFKHHYLNKAISVLNCNILDGTHDDSFRLEMLEE
PFFSNKIVVLIKILSRYRLEENMKCIVFVKRITVARAIAHILQNLKGLDLWKCEFLVGRH
SGPKNMSRQKMDAIVENFSSGEVNLLIATSVGEEGLDIQTCCLVVRFDLPETVASFIQSR
GRARMTNSKYVVLLERGNHSQEKLLNDYIDGEGIMNGEIDLRTSNDVFDHLEEKSYRVEK
TGASISTACSVSLLHRYCYNLPKDMFFNPSPAFIYIDDTEGIICRVILPPNAAFRQVDGQ
PCQSNDEAKRDACLEAYVKLYELGALTDFLLPGSGSGKNRASTTNGSASNSHDDESLREE
LHEMLIPTILKPSTCKLDSPLNLHFYYIQFFPIPADRHYRIFGLFVINPLPMEAEKLEVD
LHLARGRIVKAGMKHLGTISFDEEQMMLARNFQEMFLKVLLDRSEFTVSHVMLLSNSETL
QFNSTFYLLLPIKQELYGDIFMIDWPTVKRCLSSPVFKDPTGVSAHGSYLPDESLRLLDN
MYSKTDVVGSLIFAPHIKTFFVIDVILNELNARSEYDGATYEDHYKERFGIKLSHPEQPL
LHAKQLCNLHNLLHDRLRETTEEGHELMEHFVELPPELCSLKIIGFSKDMCSSLSLLPSL
MCRLENLLVAIELKDVMLSSFSEASQISASGILEALTTERCLERISLERFEVLGDAFLKY
VVGRHNFLTYEGLDEGQLTSRRSAIVNNSHLYELSIKRNLQVYIRDQHFEPTQFIALGRP
CKVVCNADTEVNIHTDSRENCNLRCTKSHHWLHRKTIADAVESLVGAFLVEGGFKAAFAF
LRWVGIDVDFKDSSLYRVLDASSINLSLTNHTNVGELEELIGYNFKHKGLILEAFVHPSF
NKHSGGCYQKLEFLGDAVLEYLITSYLYSAYPDLKPGQITDLKSLAVSNNSLAYVAVQKG
IHKYLIKDSNYLSTAVNKFENYIRLPNSEKDLVEEPACPKVLGDIVESCVAAVLLDSGFN
LNYVWTLVLMLLKPVLSFSDMHMNPMREIRELCQCHELELGLPEPMKADGEYHVKVEVNI
NSQVISSAAANRNSKVARKFAAQETLSKLKNYGYTHKNKSLEEILRDARKKEPELLGYNE
EPIKVEADISAEMNNLKIGKERDANISFQNTEISIRGTLRTSSQRTAGNTMFSKDDVSIE
RNNQLKVAKQNACLPKGTTQKNIRKEYHGDMVNKTAKSFLFEVCAVSYWKPPEFELCKEE
GPSHLRRFTYKVTVQIRGPSETLLECYSDAQLQKKAAQEHAAQGALWYLRQHGYLPKDEV
CV
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcttttcgcatctccgtctcgccgactgactcctcgtcctccccgagcagtcct
cccctcactttgcagcctcctccgcggcgcccagcagttgcgccccggggcacacaagag
agagaaagaggagagggagagggagccccgcttccgcgcgaagcttccgccatgggcgac
atctcgaccgcggcggcgagcgcggaggagcgcgagccccagcccaaggacccgaggacg
atcgcgcgcaagtatcagttggatctctgcaagagggctctcgaggagaacatcatagtg
tacctaggcacgggatgcgggaagacccatatagccgtgttgctcatatacgagcttggc
catctcattcgcaaacccagacgtgatgtctgcatcttcctcgccccgacagtccccctt
gttctccagcaagcaacggtgattgctaattccaccaatttcagagttcaaagttactat
ggggatggtaaaaacccaagaaatcacgaggactgggagacagagatgggggaatctgag
gttcttgtaatgactccccagattttgttgcatagtttgcggcattgtttcatcaagatg
gactcaattgcacttctgatattcgatgaatgccatcacgcacaagcacacaagcggcat
ccatatgcacaaattatgaaggaattctacgataatgacatggtgaagccccctcgcatt
tttggcatgactgcttcaccagtaattggaaaaggcgggtctaacaagcttaattacacc
aaatgtatcaacagccttgaagaattattgcatgccaaggtctgttcggttgataatgca
gagctggaaagtgtgcttgcttttcctgatatggaggtgtacacgtatgtcccgcttagt
cactctaatcttactgtaacttacaacaaagaacttgattgctcaaagcttgagagtgaa
cgcatactacgcgagagcctatacgatttcaaggattctcagaagaaactaaagtccctg
gggaggttgcatggaaatttagtattctgtttgcaagaacttggttcgtttggagctctg
caagctgcaaaggctttcctttcatttgatggtgatgttttggacagaaaggagtctgac
atgaacgacaattctaccagatttaagcatcactacctaaacaaagcaatttctgttctg
aattgcaacatattagacggtacccatgatgattcatttcgtctagagatgctagaagaa
cctttcttctcaaataaaattgtggttcttattaaaattctctcgagatacaggctagag
gaaaacatgaagtgcatagttttcgtgaaaagaataactgttgcaagagcaatagcacat
atcctccaaaatttgaaaggccttgatctttggaaatgtgagttccttgtgggacgccac
tcgggaccaaagaacatgtcaaggcagaagatggatgctattgttgaaaatttctcttct
ggcgaggtgaatcttttgattgctaccagtgtaggtgaagagggtctggacattcagact
tgttgcctcgttgtgcggtttgatcttccagaaactgttgccagttttatccagtcgagg
ggacgtgctcggatgacaaattctaaatatgttgttctcctggagaggggcaatcattct
caagaaaagttgcttaatgactatattgatggtgaaggcattatgaatggagagatagac
ttgagaacttcaaatgatgtgtttgatcacctcgaggagaaaagttatcgagtggaaaaa
acgggtgcttccattagcactgcatgtagtgtatctctactacatcgctactgctacaac
cttcccaaggatatgttcttcaatccttccccagcattcatctacattgatgacaccgag
gggataatctgcagagtaattcttccaccaaatgctgcttttcgtcaagtggatggccaa
ccatgccaatcaaatgacgaggctaagagggatgcatgcttagaggcatacgtgaaattg
tatgaattgggtgctttgacagattttcttctgcctggttcaggttcaggaaagaacagg
gcatcaacaacaaacggttcagcaagcaacagtcatgatgatgaaagtctaagagaagag
cttcatgagatgttaattcccacaattctcaaaccttcaacatgcaaactggacagtcca
ttgaacttgcatttctactatattcaattctttcccataccagcagatagacattatcgg
atatttggtctttttgtgatcaacccccttcctatggaagctgaaaagttggaggttgat
ttgcatctggctcgtggcaggattgtgaaagcaggaatgaaacatttagggacgatatca
tttgacgaagaacagatgatgcttgcacgcaatttccaagaaatgtttctgaaggttctc
ctggacagatctgagttcactgtgtctcatgttatgttgttgagcaacagtgaaacgcta
cagtttaattcaaccttttacctgctgcttccaatcaagcaggaattgtatggtgatata
tttatgattgactggccaacagttaagcgctgtttatcatcaccggtttttaaagatcca
actggtgtgtctgcgcatggatcatatttgccagatgagtctttaaggcttcttgataat
atgtacagtaaaactgatgtcgttggcagtctaatctttgctccccatattaagacattt
ttcgtcattgatgtcattctgaacgaactaaatgctagaagtgaatacgacggtgctact
tatgaagatcattacaaggaaaggtttggtatcaaactatcacatcccgagcagccactt
ctgcacgctaagcagctctgcaatctgcataatttgcttcatgaccgattacgggagacc
acagaagaaggtcatgaattgatggagcactttgtggagttgcctccagagctatgttct
ttgaagataattgggttttcaaaggatatgtgtagctccctgtctttgttaccatcgttg
atgtgtcggttggagaatttgctggtagctattgagttgaaggatgtcatgttgtcttca
ttctcagaggcttctcaaattagtgcctctggtatccttgaagcacttaccaccgaaagg
tgtttggagaggatttctttggagcgctttgaagtcttaggtgatgcttttttgaagtat
gtagttggacgtcacaactttcttacatatgaaggacttgatgaagggcaattgaccagc
agacgttctgctatagtgaataattcacatttatatgagttatcaatcaaaagaaatttg
caggtgtacatacgggatcaacactttgaaccgacacagttcattgcactgggaaggcct
tgtaaagttgtttgcaatgctgacacagaagtgaatatacacacagatagccgagaaaac
tgtaacttgaggtgtacaaagtcgcatcattggttgcataggaagactatagcggatgct
gttgaatcgcttgtcggagcatttcttgttgaaggtggattcaaagctgcatttgcattc
cttcgctgggtgggaatagatgttgattttaaagattcatctctatatagagtattagat
gcaagctccatcaatttatctctcacgaaccacaccaacgtcggtgagcttgaggaatta
atcggttacaatttcaaacataagggtctaattctcgaagcatttgtgcatccttcattc
aataaacattctggaggatgctaccagaaattggagttccttggagatgctgttttggaa
tatttgataacctcgtacctctactcagcttatcctgatctaaagcctggtcaaataact
gatttaaaatcgttagctgtcagtaataattcgcttgcatatgtggcagtccagaaaggt
atccataagtatcttataaaggattcaaattatctttcgacagcagtgaataagtttgag
aattatattagacttcccaattcagagaaagacttggtagaagaaccagcatgcccaaag
gttcttggtgatattgtcgaatcttgtgttgctgcagttcttttagattcaggattcaac
ctgaactacgtttggacactagtgcttatgcttctaaagccagtgttgagcttctctgac
atgcacatgaatcccatgagagaaattcgggaactttgtcaatgtcatgaacttgagtta
ggccttcccgaacctatgaaagctgatggagagtaccacgtcaaagtggaagttaacata
aacagccaggtgataagttctgccgctgcaaaccggaattcaaaagttgctaggaagttt
gctgcacaagaaacactttctaaactgaagaattatggatacacacataaaaacaagtca
ctggaagagattttgcgagatgctaggaagaaagaaccagaactactaggttataatgaa
gaaccaatcaaagtcgaggcggacatatctgcagaaatgaataatctgaagataggtaaa
gaaagggatgcaaacatctctttccaaaatacggaaatttctattcgtgggactcttaga
acctctagccaaagaacggcagggaataccatgttttccaaggatgatgtcagtattgaa
aggaataatcagctcaaggttgcaaagcagaatgcctgtctgccgaagggaacaactcag
aaaaatattagaaaggagtatcatggtgatatggtaaataaaacagcaaagtctttcctt
tttgaagtatgtgccgtaagttattggaaaccccctgaatttgaattgtgcaaagaagaa
gggccaagccacctccgaagattcacgtacaaggttacagttcagatcaggggaccctcg
gagacactcttggagtgctacagcgatgctcaactacagaagaaggccgcacaagagcat
gccgcgcagggggctctgtggtatctcaggcaacatgggtacctacccaaagatgaagtt
tgtgtgtag
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