Triticum aestivum (bread wheat): 123046023
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Entry
123046023 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123046023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123046023
03036 Chromosome and associated proteins [BR:
taes03036
]
123046023
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123046023
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123046023
mRNA degradation factors
5'-3' decay
Decapping complex
123046023
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123046023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
123046023
NCBI-ProteinID:
XP_044325238
LinkDB
All DBs
Position
2B:complement(558327000..558334216)
Genome browser
AA seq
499 aa
AA seq
DB search
MDQRARYPPGIGNGRGGNPNYYGRGPPPTQQHQHQQPPQQQQQAQGQRQSQHSQHHSQQL
QHQQWLRRNQTAGEAAAGAARASEHHAPAAAGDADLSSQDWKAQLKLPPPDTRYQTEDVT
ATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC
IPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRL
YQPVHLLVGTPGRVLDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPSSRQ
ILMFSATFPVTVKAFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKL
QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD
LFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQE
LGTEIKPIPPQIDRTIYCQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgggcgaggtatcctcccggcatcggcaacggccgcggcgggaatcctaac
tattacggccgtggcccgccgccgacgcagcagcatcagcatcagcagccgccgcagcag
cagcagcaggcgcaggggcagcggcagtcgcagcactcgcagcaccacagccagcagctt
cagcatcagcagtggcttcggcggaatcagaccgctggcgaggccgccgcgggcgccgcc
agagccagcgagcaccatgcgccggctgccgcgggtgacgccgatttgagttcgcaagac
tggaaggcccaattgaagcttccacctccagatacacgctaccagaccgaggatgtcact
gcaactaagggaaacgaatttgaagactattttctgaagcgtgaacttcttatgggcata
tatgagaaaggatttgaaagaccgtctcctatccaagaagaaagcattcctattgcatta
accggcagcgacattcttgcaagagcaaaaaatggaaccgggaagactgctgcattttgt
atacctgcgctagagaagattgatcaagacaaaaatgctattcaagttgttatattggtc
cccacgagggaattggctttacaaacatcacaagtctgcaaggaacttgggaaacacttg
aagattcaagtcatggtcactactggaggaacaagcctaaaggatgatattgtccgtctt
tatcaacctgtgcatttacttgtggggacgcctggtcgtgttttggaccttacgaagaaa
ggcatttgcattctgaaggactgttcaatgcttattatggatgaggcagacaagcttctt
tctcctgagttccaaccttctgtggagcagttaattcgataccttccatcgagtcgacag
attctgatgttctctgcaacattccctgtgactgtcaaggctttcaaggacaaatatctg
cctaaaccctatgttattaatcttatggacgaacttacactgaagggaattacccagttc
tacgcctttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctg
caaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaag
aagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcat
cgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagat
ctttttacaaggggaatagatatccaagctgttaatgttgttatcaattttgatttcccc
aagaccgctgaaacctatctccacagggttggtagatctgggagatttggccaccttggc
ctggctgtgaatctgatcacctacgaggatcgttttaacttgtatcggattgagcaggag
cttggaactgagataaaacccatacctcctcagatagaccggacgatatactgccaatag
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