Triticum aestivum (bread wheat): 123046082
Help
Entry
123046082 CDS
T07757
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123046082
03015 mRNA surveillance pathway
123046082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123046082
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123046082
mRNA cycle factors
P-body specific factors
123046082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
RskA_N
Motif
Other DBs
NCBI-GeneID:
123046082
NCBI-ProteinID:
XP_044325303
UniProt:
A0A3B6CA31
LinkDB
All DBs
Position
2B:568902652..568914570
Genome browser
AA seq
1172 aa
AA seq
DB search
MEHMENESHEGKKQDEEGHHNNEVVRLEEYKKLIDVKTALRHSNLNPERPDASHLRTLDS
SIKRNTAVIKKLKVINDEQKDGLMEELKSVNLSKFVSEAVSYICEAKLRSADIQAAVQIC
SLLHQRYKDFSPCLIQGLLKAFFPGKAGDDIDPDKNSRAMKKRSTLKLLMELYFVGIVED
ASTFINIIKDLTLVEHLKDRETTQTNLTLLASFARQGKHFLGLQKHGQEAYDEFFMGLNI
SDDLKTFFKKSLSSYYDAAVAILQSEHASLRAMESENAKILNVKGELSDENTALYEKLRK
SFDQLLRCVSSLAEALDMQPPVMPDDGHTTRVTTASELSPSGKHFSAVEPIWDDEDTKAF
YESLPDLRVFVPGVLLGEAEPKLVDQHGKVHEQTGEQKLEQGTEVQNNAEAPVPEHQLEG
KTNVGSKNSEKKDKTGKEISKEKEADQKGDIEREKVRVTDGASLDNLLQRLPRCVSRDLI
DQLTVEFCYLNSKANRKKLARALFNVPRTSLELLPFYSRLVATLSTCMKDLPSMLLSMLE
EEFNFLMNKKDQIKIETKIRNIRFIGELCKFNIAPSGLVFSCLKACLDDFSHHNIDVACN
LLETCGRFLYLSQGTTVRMSNMLEILRRLKNVKNLDPHHSTLVENAYYLCKPPERSARVS
KVRPPLHQYIRKRLFSDLDKTSVQHVLRQLRKLPWAECEEYLVKCFLKVHKGKYSQVHLI
ALLTAGLSHYHDDFHVAVVDEVLEEIRVGLELNDYAMQQRQLAHMRFLGELYNYEHIDSS
VIFDTLYLITVFGHGTLEQDLLDPPEDFFRIRMIVTLLQTCGHYFDRGSSKRKLDRFLLH
FQRYILNKGPLPLDVEFDVQDMFAELRPNMTRYSSPELLASALAELEENEKTKQSESAAS
DASCKSSANRPDKNGTGHEEVADSESYSGSRSIYRDGSEDGDSLYEENSDDRSGNGVVDD
DDAMPSGSDEEERVQVRHKVVQVDPKEQEDFDRELRALLQESLESRKLEPRVKSTLNMTV
PMKIVEGSKDSRATERESGEELAAEENGNAGGGSEVKVCVRVLVKKGHKQQTRQMLIPGD
CSLVQSTKQQEAALLEEKQNIKQKILEYNEREEEEFNASSFQTGFWGQGGSSAGGSIGSA
GRGSWDGSNRGGRGRQRYYIAGGIYHGYGRGR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggagcacatggaaaatgagagccacgaggggaaaaagcaagatgaagaggggcatcat
aacaatgaggtggtccgtcttgaagaatacaagaagcttattgacgtaaagacggctctc
cgccacagtaacctaaaccctgagaggcctgatgcaagtcacctgagaactcttgattcc
agtattaagcgcaacacagcagttatcaagaagctcaaagtgataaacgatgaacaaaag
gatggcttaatggaagaattgaaaagtgtgaatctaagcaaatttgtcagtgaggcagtt
tcttacatttgtgaggccaaacttcgttctgctgatatacaagctgctgttcagatttgt
tcgctgcttcatcaaaggtacaaggacttctctccttgccttattcaaggactgctgaaa
gccttctttccagggaaagctggagatgatatagatccagataagaactcaagggccatg
aagaaaagaagcacactgaagcttcttatggaattgtattttgttggaattgttgaagat
gctagtactttcataaacattataaaggatctgacgttggtggagcatttgaaggaccgt
gaaacaactcagacaaatttgactctccttgctagttttgctcgccaaggaaagcatttt
cttggattacaaaaacatgggcaagaagcttatgatgagttttttatgggcctcaatatt
tccgatgatctgaagacgttctttaagaaatccttgagctcttactatgatgccgcagtt
gcaattctccagtcagaacatgcgtctcttcgtgcaatggagtctgaaaatgcaaagatt
ttaaatgtgaaaggggaactaagtgatgagaatactgccttgtatgagaagcttcggaaa
tctttcgatcagttattgcgctgcgtttcatccttagctgaagctcttgatatgcagcct
cctgttatgccagatgatggacatacaacaagggtaactacggcgtcagagttatcccct
tctgggaagcatttttctgcagtagaacctatctgggatgatgaagacacaaaggcattt
tatgagtctttgcctgatctcagagtattcgtgcctggtgtactattgggagaagctgaa
ccaaagttggtagatcaacatggaaaggttcacgaacaaactggtgagcaaaaattggaa
caaggaactgaagttcaaaacaatgctgaagctcctgtccctgagcaccagttggaagga
aaaacaaatgttggatccaagaatagcgaaaaaaaagataaaacaggcaaagaaatttct
aaagaaaaagaggctgatcaaaaaggagatattgaaagagaaaaagtaagagtcacagat
ggtgcaagtttggacaacctgcttcagaggctgccaagatgtgtgagccgagatctaatt
gaccaattgacggtagagttttgctatctgaattctaaagcaaacaggaagaaacttgca
cgagctttattcaatgttccaaggacttcgttggaactgttacctttctattcccgttta
gttgccactttgtccacatgcatgaaggatctcccaagtatgctcttgtcaatgcttgaa
gaagagtttaactttttgatgaacaagaaggatcagattaaaatcgaaacaaaaattaga
aatattagatttattggggaattgtgcaaattcaatattgctccatcaggccttgttttt
agttgtttgaaggcttgcctagatgattttagccatcataacattgatgtggcctgcaat
cttcttgagacctgcgggcgctttctttatctctcacaaggaactacagttcgcatgtca
aacatgctggaaatactgaggaggttgaaaaatgtgaagaatttggatccacaccacagc
acacttgtagagaacgcctattacttatgcaaaccaccagaaagatctgccagagtctct
aaagtccggccacctctccatcagtacataaggaagcggctgttctcagatcttgataaa
acaagtgttcagcatgttcttcgtcagttacgcaagttaccttgggctgagtgcgaggag
tacctggtgaaatgttttctcaaggttcacaagggaaaatatagccaagttcatctgatt
gctcttctaactgctggtcttagtcactatcatgatgattttcatgtggctgtggtagat
gaggttctagaagagattagagttggacttgagctgaatgactatgcaatgcaacagcga
caacttgcccacatgcgattccttggggagctatataactacgagcatattgattcatca
gttatatttgacacattgtaccttattactgtatttggtcatggaacactggaacaagat
ctgcttgaccccccagaagatttcttcaggataaggatgattgttacacttctccagaca
tgtggtcactattttgatagaggctcttcaaaaagaaagcttgacagatttttgctacat
tttcaaagatatattctgaacaaagggccattgccacttgatgttgagtttgatgtgcag
gacatgtttgctgagctacggcctaacatgactaggtattcatctccagagctgttggct
tctgctctggctgagcttgaagaaaatgagaagacgaaacaatctgaaagtgctgcttct
gatgccagctgcaagagctcagcaaacaggcctgacaaaaatggcacgggccacgaagaa
gtagcagacagtgaaagctattcaggcagcagaagcatctatcgcgatggaagtgaagat
ggagattctctgtacgaagaaaactcagatgacaggtcagggaatggagtcgttgatgac
gatgacgccatgccttctggttctgatgaagaagaaagggtccaggttagacataaggtg
gtgcaagttgaccctaaggagcaagaagactttgatcgggagctgagggcccttctacag
gaaagcttggagtcgcgtaagttggagccacgggtgaaatccactttgaatatgactgta
ccgatgaaaatcgttgaggggtcaaaggactcgagagccactgaaagagagagtggagaa
gagcttgcagctgaggaaaatggtaatgctgggggcggtagtgaggtcaaggtgtgcgtc
agggtgcttgtgaagaaagggcacaagcagcagacaaggcaaatgctcattcctggggac
tgctcactcgttcagagcacaaagcagcaagaggcggctctgctcgaggagaagcaaaac
atcaagcagaaaatccttgaatacaacgagagggaggaggaagaattcaacgcatcatca
ttccaaactgggttctggggtcaaggaggaagcagcgcaggcggcagtatcggctcagcc
gggcgtggttcatgggacggttcaaacagaggcggtcgcggccggcagcggtactacatc
gccggcggtatctaccatggctatggcaggggaaggtga
DBGET
integrated database retrieval system
