Triticum aestivum (bread wheat): 123047226
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Entry
123047226 CDS
T07757
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123047226
09123 Folding, sorting and degradation
03018 RNA degradation
123047226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123047226
03041 Spliceosome [BR:
taes03041
]
123047226
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123047226
mRNA degradation factors
5'-3' decay
Lsm complex
123047226
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123047226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
123047226
NCBI-ProteinID:
XP_044326662
LinkDB
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Position
2B:761399263..761401354
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AA seq
100 aa
AA seq
DB search
MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLAAEGAS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcaaggagacggcgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggccgccaagttacaggaaccttgaagggatatgaccagctgctc
aacttagtgctggatgaagcagtcgagtctgaaagagagcaagatgacccattgaagctg
tcaaccaagaccagacaacttggtctcattgtgtgcagaggcactgctgtcatgctggtg
tcaccaactgatggaaccgacgagattgccaaccccttcctcgcagcggagggggcgtca
taa
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