Triticum aestivum (bread wheat): 123047409
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Entry
123047409 CDS
T07757
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123047409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123047409
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123047409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
AAA_22
Phospholamban
Motif
Other DBs
NCBI-GeneID:
123047409
NCBI-ProteinID:
XP_044326886
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Position
2B:complement(786383736..786391119)
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AA seq
712 aa
AA seq
DB search
MFVPKTDNQSDLEGPHRNAGPWLCSICSQQNDTSCMSCEVCGVLRDLSLYFNNSNEPEGG
AKRRNKHSGVSVLARSLFAPSGPKSKAVVFSDGFRGNKNATGHMQASLGTLHKTYMTHKQ
RHNIVPFKFDIPSPDDMVSTGLKSSRHLRKAVPSVDIPGKMVMGDDDLVVEKDTSTDPSS
SVKLDELGGNSSTVAANTQNETLILDNELQHLSLERKPKNSKTKIKKPVPVSQYKPEPWM
LQGEDQDMPRQLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKNEKEAKEKGKGSFAY
AWAMDDSADERARGITMNVGVAYFDTKNYQVVMLDSPGHKDFVPNMISGVTQADAAVLVV
DASLGSFESGMGVNGVGQTKEHSQLIRSFGVENLIVAVNKMDSVEYSAERFNYVKSQLGI
FLRSCGYKESAITWVPLSAMENENLVTAASDTRLSSWFHGTCLLEAIDSSAPPPRDVSRP
LRLPICDVISSHVLGQVAVCGKVVCGAIGSDSKVLVMPSGELATVKIIERDSSRLSLARA
GDNIAIGLQGIDPIHVMSGGVLCHPDYPVSVASSLELKILVLDITVPILPGLQFELHVHH
AKVSASLVRIVSLLDQKTGKASAKKPRMLTARQAAIIEVRRVTCAPLQQMSLNECLVIVC
GACFVQVKLEREVCVEEFATLKALGRAFLRSQGSTVAVGVVQVQGERAEQAS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctaaaacagataaccaatctgatctcgaggggccgcatagaaacgctggg
ccgtggctgtgctccatttgctcgcagcaaaatgatacgagctgtatgtcctgtgaggta
tgcggcgttcttcgggatttgtcactgtatttcaataactccaatgaacctgaaggtgga
gctaaacgtagaaacaagcattctggtgtatctgtactggcaagatctcttttcgcacca
tctggtccaaaatcaaaagccgttgttttctccgatggatttcgaggcaacaaaaacgca
acaggacatatgcaagcttccttgggtactctgcacaagacatacatgacacataagcag
cgccataacatagtgcctttcaagtttgatataccatctcctgatgacatggtctctaca
ggcttaaaatcgtccagacatttgcgaaaagctgttccatctgtagatatccccggaaag
atggtgatgggtgatgatgatcttgtagttgagaaggatacaagtacagacccaagttca
tcagtgaagttggatgaacttggtggaaatagtagcactgttgccgccaatactcagaac
gaaactcttattttggacaatgagctacaacatttgagtttagagaggaagccaaaaaac
agtaaaaccaagattaagaagccagttcctgtttcacaatacaagccagaaccgtggatg
ctacagggcgaagatcaagacatgcctagacaactaaatcttgctattgttggtcacgtt
gattctggcaaatcaacattatgtggtaggttgctgcatgccctgggtagaatttcaaaa
aagcaaatgcataagaatgagaaagaagcgaaagaaaagggaaaagggtcgtttgcatat
gcttgggcaatggacgacagtgctgatgaaagggcacgtggcattacgatgaatgtcggt
gtagcatactttgacaccaaaaattaccaagttgttatgctcgactcccctggtcacaag
gatttcgttcctaacatgatatctggagtgacgcaagctgatgcagctgtcctagttgtt
gatgcctctcttggatcattcgagtcaggcatgggcgttaatggggttggtcagacaaag
gagcactcacagcttattcgaagctttggtgtcgagaacttgatagttgctgtcaataag
atggattcagtggaatattcggcagaacgcttcaattatgtgaaatcacaacttggcatt
tttctccgatcttgtggctataaagagtcagcgataacctgggttcctttgagtgcgatg
gaaaatgaaaatctggtgacagcagcttcagatactcgtctctcatcatggtttcacggg
acttgccttctggaagcaattgactcgtcagcaccacctcctcgtgatgtttcaaggcca
ctacggcttccaatttgtgatgttatttcatcccatgtgctggggcaagtggcggtttgt
ggtaaagtggtgtgtggagcaatcggaagtgattccaaggtccttgtgatgccttctgga
gagctagctacagtgaaaatcatcgagcgggactcctctcgtctcagcttggcaagagcc
ggcgacaacattgcgattggactgcaagggatcgacccgatccatgtgatgtctggtgga
gttctgtgccatccggattaccccgtgtcggtggcgtcttccctggagctgaagatcctg
gtgctagacatcaccgtacctatactgcccggccttcagtttgagctccatgtgcaccac
gcgaaggtgtcggcgtccctggtgagaatcgtgtcactgctggaccagaagactggcaaa
gcctcagcgaagaagccgcggatgctcaccgctagacaggctgccatcatcgaggtacgt
cgcgttacatgtgcgcccttacagcagatgagtctgaatgagtgcctggtgatcgtctgt
ggtgcctgttttgtccaggtgaagctggagagggaggtgtgcgtggaggagttcgcgacc
ctcaaggccctgggccgggcgttcctgcggtcgcaggggagcaccgtcgcggttggcgtc
gtgcaggtacagggggagcgagcagagcaggcttcttag
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