Triticum aestivum (bread wheat): 123047455
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Entry
123047455 CDS
T07757
Name
(RefSeq) uncharacterized protein LOC123047455
KO
K13126
polyadenylate-binding protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123047455
09123 Folding, sorting and degradation
03018 RNA degradation
123047455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123047455
03041 Spliceosome [BR:
taes03041
]
123047455
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123047455
mRNA cycle factors
Stress granule specific factors
123047455
Spliceosome [BR:
taes03041
]
Complex C
Other components
Complex C specific factors
123047455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_Nup35
RRM_10
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
123047455
NCBI-ProteinID:
XP_044326949
LinkDB
All DBs
Position
2B:791850354..791855186
Genome browser
AA seq
1047 aa
AA seq
DB search
MGCKSDLADQLQEDGSDGMNAVAAEYEESSEEEEPFEREFYDDDDDDEDNVGEPDTQAVD
PCEDPVAEEEEANGDEPCNGVTPLEDEDSSYDEPFVDELCYEEEDSGEQDSYYAEPFTDQ
LCEVEPCDVKVAHAENFVKKKSSPVQAIKKEQNKEKVLKQALGKGSSHEHKAVPVNDEIE
LKPFKKRLSVRFATDVSCYTYSAESFGDAKLEKRKAQFDDLNSHLCKRQEHTVSLPHEGV
KLKEVDDTNLYVGNLPASVTSHKLIELFLPFGRIVRSKVADDRFTGVSQGYGFVKYAEPR
SATAAIERMNGRLVDGKTLEVRVAAVPAPPSVSNPSMQSVSETCSLPSKEIDPSYLYVCN
LPSAMDTLKLLEYFLPFGKVTDIRMPRDHTTGLSKGYGFVKYSDSHHAAQAIIHLNGFLV
EGKKMDVRAYDPSPPRPIKEIDMANLYVCNIPVSIDTNKLVELFSPFGKITQARVAADQG
YGFVKFADSQCAAEAIALMNGSLVEGETLIVRVAGLSSSASSSAVQGSPIASPEINKSRL
YVTNLPRTVNADKLVQLFVPFGQISKVMVNLEYSLVFYADVASAIKAVERMDGYLIGGKR
LVVRRSDSSCPTDGAEHASSQSAAKPMREIDMANLCVAGIPPTMTGDQLVELFRPYGQIV
QSRMFRGYGMVRYQNPSSAAAAIDHMDGYLIGGSTLAVRVSGLPNPVDFNAAANAPLTLQ
LQQRPANIIAAATNPMDFTAAATNAAPTPQLQQPRPANGPQKQIDMTNLYVCHLPPYVTT
EKLIELFLPCGQITQAKAVVDLCTGVCKGYGFVKFVDTYASAVALTYMNGYWLEGHILEV
RIAGVHQSAMGGYMAHLYSQFTVPDPSMTAIGVPTSSCWPYHCAAESVAYTAENQGQGTD
AASQTSQPPESLSASSSFAPDMEWSPVSSTHLADTSSQQQHLSSHVADTSSQQQHLSSHV
ADTSSQQQQQPSAGWAGPPGFEPSHAHAAVSPPQPPPSAVPWAGPPGFEPHSIPKKKDAA
TATKPSQPCSKVHLAQSGGSQKRRSIV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaaaagtgacctggctgaccagctgcaggaggatggcagtgatggaatgaat
gctgttgctgctgaatatgaagaaagcagcgaagaagaagaaccatttgaacgtgaattc
tacgatgatgatgatgacgacgaagacaatgtgggtgagccagacacacaagctgtggat
ccttgtgaagatcctgtggcagaagaagaggaggctaatggagacgaaccttgcaatggc
gtcaccccacttgaagatgaggattccagttacgatgaaccttttgttgatgaactctgt
tatgaggaagaagacagtggcgagcaggactcatattatgcggaacctttcacggatcag
ctctgtgaagtggagccatgtgatgttaaggtggctcatgcggaaaactttgtgaagaag
aagtccagtcctgttcaggctatcaagaaggaacaaaataaggaaaaggtcctaaaacag
gcactaggaaagggcagcagccatgagcacaaggcagtaccagtgaatgatgaaattgaa
ttgaagccgttcaagaaacgattgtctgtcaggtttgctactgatgtgtcttgttacaca
tacagtgctgaaagttttggtgatgccaagttggagaaaaggaaagctcagtttgatgac
ctgaacagccacttgtgtaagaggcaagaacacacagtttctttacctcatgaaggtgtc
aagctgaaagaagtggatgacactaacctgtatgtgggtaacctgccagcttctgtgact
tctcacaagcttatcgagttatttctacctttcggacgaatcgttcgatcaaaagtggcg
gatgatcgtttcactggtgtaagccagggatatggctttgtgaagtatgctgaacctcgt
agtgccacagcagctattgaacgcatgaatgggcgcctggttgatgggaaaacattagag
gttagagtagctgcagttccagctccaccatcagtatccaatccatcaatgcagtccgtg
tcagaaacatgcagtctgccctcgaaagaaatcgacccgagctacttgtatgtctgcaac
ctcccctcagccatggacacgctgaagctactcgagtattttctgcctttcgggaaagta
actgatataaggatgcccagggatcacaccacaggtttaagcaaaggatatggctttgtg
aagtactctgattctcatcatgcagctcaggccatcatccatttgaatggatttctggtt
gagggtaaaaagatggacgtccgggcgtatgacccctctccacccagacccatcaaggaa
atcgacatggccaatctatatgtctgcaacattcctgtatccattgacacaaataagctg
gttgagcttttctcgccatttggtaagatcacccaagctagagtggcagcagaccaagga
tatggcttcgtcaagtttgccgattctcagtgtgctgccgaggctatcgcactgatgaat
ggatcactggttgaaggggagacattaattgtcagagttgcaggcctttcatcatcagca
tccagctcagctgtacaaggctcgccaattgcctctccagaaatcaacaaatcaagactg
tacgtcactaaccttccgcggaccgtgaacgccgataagctggttcaacttttcgtgccc
tttggtcagatcagcaaagtcatggtcaatctggagtatagcctagtgttctatgcagat
gtagcctcagcgatcaaggctgttgaacgtatggatgggtatctaattggtggaaagagg
ctagtggtcaggcgatcagactcctcttgtccaaccgatggagcagagcatgcttcctca
cagtcagctgccaagcccatgagagaaattgatatggccaacttgtgtgttgccggcatc
ccaccgacgatgaccggcgatcagctggttgagcttttccggccatacgggcaaatcgtg
caatctcggatgtttcgtgggtatggcatggttaggtaccaaaacccttcgtctgcagct
gctgcaattgatcatatggatggttacctaattggaggaagtaccctggctgtgagagtg
tcaggccttcctaaccccgtcgatttcaacgctgcagcaaacgctcctctaacactgcaa
ctgcaacagaggcctgccaatatcattgctgctgcaacaaatcccatggacttcaccgct
gctgccacaaatgctgccccgacaccacaactgcaacaaccgcggcctgccaacgggccg
cagaaacaaatcgacatgaccaacctatatgtctgccatctcccgccctacgtcaccact
gaaaagctgatagaactctttctgccatgcggccaaataactcaagccaaggcagttgtt
gacctatgcactggtgtgtgcaagggatatgggtttgtcaaatttgttgatacttatgct
tctgccgtggccctcacttacatgaacggttactggctggaggggcacatcttggaggtc
aggatagccggtgtccatcaaagcgctatgggcggctacatggcgcatctctactcccag
ttcacagtccctgatccctcaatgacggcgattggagtaccaacatcgtcgtgttggcca
taccattgtgctgccgaatcagtagcatacaccgcagagaaccagggccagggaaccgac
gctgcttctcaaacatctcagccgcctgaatctctgtcagccagttcatcatttgctcct
gacatggaatggtctcctgtgtcctcaacccatctcgccgacactagttctcagcagcaa
cacttgtcaagccatgtcgccgacactagttctcagcagcaacacttgtcaagccatgtc
gccgacactagttctcagcagcagcaacaaccttcagcaggctgggccggtccgcctggc
ttcgagccctctcatgcgcatgcggcggtctctccccctcagccgccgccgtcagcagta
ccttgggctggcccgcccggcttcgagccccattccatccccaagaagaaagatgccgcc
accgcaacaaaaccttcccagccttgctccaaggtccatctggcacagtcaggaggcagc
cagaaacggcgttcgattgtctag
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