Triticum aestivum (bread wheat): 123047603
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Entry
123047603 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123047603
09124 Replication and repair
03420 Nucleotide excision repair
123047603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123047603
03400 DNA repair and recombination proteins [BR:
taes03400
]
123047603
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123047603
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123047603
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123047603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
Motif
Other DBs
NCBI-GeneID:
123047603
NCBI-ProteinID:
XP_044327129
LinkDB
All DBs
Position
2B:809602119..809611836
Genome browser
AA seq
1859 aa
AA seq
DB search
MDARFPHSPAEVAKVKLVQFGVLSPDEIRQMSVVMIEHAETMERGKVKPGGLSDPRLGTI
DRKLKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILADEEDTK
FQQALKIKNPKNRLRRIYDACKSKKVCSGGEDLEGQDQQDTEEPVKKKGGCGAQQPNITV
DGMKMVAEFKTTKKKNDEQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPEFAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRSKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
LLGCRKMTKRDTLIEKDVFMNILMWWEDFDGKVPAPTILKPRPIWTGKQVFNLIIPKLIN
LIRFSAWHAETENGFTTPGDTVVRIEKGELLSGTLCKKTLGASSGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADADTMEKINETIANAKIEVNGLIKQAQEKEL
EPEPGRTMMESFENRVNQVLNKARDESGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKDEFDNVFRYELNDMNWKPNYMLPDHVEDLKTIREFRNVFEAELQKLEADRLQ
LGQEITTTGEGTWPMPVNLKRLIWNAQKTFKIDLRKPSDMHPMEIVEAIDKLQERLKVVP
GDDAMSIEAQKNATLLFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLK
PGVNSRKESAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIPEDVDFVRSYYEMPDEDV
DPDKMSPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRIA
NDEAPPKGGEAQGESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKKGKVNKFDEKEGF
KGEEEWMLDTEGVNLLAVMCHEDVDPSRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF
DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAES
DYLRGVTENIMLGQLAPIGTGGCGLYLNDQMLKQAIELQLPSYIDTLDYGVTPARSPISG
TPYHDGMMSPLLSPNFRASPLSDAQFSPYVGGMAFSPMPSNYSPSSGGYSPSSPVFSPGP
GHSYSPTSPSYSPASPSYSPASPSYTPGSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPAYCPTSPAYSPTSPAYCPTSPAYSPSSPSYNPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPTSPSYRPTSPSYSPTSPAYSPTSPGYC
PTSPSYSPTSPSYSPSSAKYSPSHIYSPSSPRMMSPYSQTSPNYSPTSPSYSPTSPSYAQ
PSPSYSPTSPITTSGGPSPDYTPTSPNYSPTASYSPTAPGYSPTSTEPQTSDKDKGAAP
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcggttcccgcactcgccggccgaggtggccaaggtcaagctcgtccagttc
ggcgtgctcagccccgacgagatcagacaaatgtcggtggtgatgattgagcacgcggag
actatggagaggggcaaggtgaagcccgggggtctgagcgaccctcgtttgggcaccatc
gaccggaaactcaagtgcgacacttgtatggctgggatggccgagtgcccgggccacttt
ggccacctcgagcttgcgaagcccatgttccatatcggcttcatcaagaccgtgctctcc
gtaatgcgctgcgtgtgcttcaactgctccaagatcctcgcggacgaggaagataccaag
ttccagcaggctctgaaaatcaagaaccccaaaaatagattaagaagaatatatgatgct
tgcaagagcaaaaaggtttgctctgggggtgaagaccttgagggtcaggatcagcaggac
actgaagagccagtgaagaaaaaaggtggttgtggggctcagcagccaaatatcacagtt
gatggtatgaagatggttgcagagtttaaaacaacaaagaagaaaaatgatgagcaagat
caactcccggaaccagtggagcgaaagcaaattctctccgccgagagggtccttaatgtt
ctcaagcgtataagtgatgaggactgtcttttattgggcctgaaccctgaatttgctcgt
cctgattggatgatactgcaagtcctcccaattcctccgccccctgtgagaccatctgtc
atgatggatacttcctccagaagcgaggatgatttgactcatcaattagcgatgataatt
cgacataatgagaatttgaggaggcaagagagaaacggagccccagctcacattataaca
gagtttgctcagttgttgcagtttcacattgcaacatactttgataatgatcttcctgga
caaccaagggccactcaacgttctggaaggcctattaagtcgatttgcagcaggctgaaa
gcaaaagaaggtcggattagaggaaacttaatggggaagcgtgttgatttctcagctcgt
accgtcatcacaccagatccgaatatcaacattgatcaattgggggtgccatggagtatt
gctttgaacctgacatacccagaaactgtcactccatataacattgagaggttgaaagaa
ctagtagaatatggacctcaccctcccccagggaagacaggcgcgaagtacattatcagg
gaagatggccagaggctggatcttcgctatgtgaagaaaagtagtgatcagcatttggag
cttggttacaaggtggaaagacacctcaacgatggagattttgttcttttcaaccggcaa
cccagtctccacaaaatgtctatcatgggccatcgcagtaaaattatgccctactcaact
ttccgcctgaacttgtctgtcacttcaccatacaatgcagattttgacggggatgaaatg
aatatgcatgttcctcagtcatttgagaccagagctgaagttttagagttgatgatggtg
ccgaaatgtattgtgtcgcctcaagcaaatagacctgtcatgggtattgtccaggacaca
cttcttgggtgtcgaaaaatgaccaaaagggatactctcattgaaaaggatgtatttatg
aacatcttaatgtggtgggaagattttgatgggaaggtcccagcccctaccattttgaaa
ccaaggccgatttggactggcaaacaagttttcaacttgattatccccaagttaattaat
ttaattagattttcagcctggcatgctgaaacagagaatggatttacaactcctggtgat
actgtggtccggatagagaagggagagcttctatctggtacactttgcaaaaaaacactt
ggggcatcaagtggaagtcttattcatgttatttgggaagaggtaggtccagatgcggca
cggaagttcttgggtcatacacagtggctggtcaactactggcttctgcaaaatggtttc
agtattgggattggggatacaattgcagacgcagatactatggaaaaaattaatgagaca
atcgcaaacgccaagattgaagtgaatgggcttattaagcaagcgcaagagaaggagctg
gaacctgagccaggacgcacgatgatggaatcatttgaaaatagagtaaatcaggttctt
aacaaggctcgtgatgaatctggcagtagtgcccagaagagtttgtccgagagcaacaat
ttgaaagccatggtcactgcaggctcaaaaggcagtttcattaatatttcacaaatgact
gcttgtgtcggacagcagaacgttgagggcaagcggattccatttggttttgttgatcgt
acattgccccatttcactaaagatgactacggccccgaaagtcgtggatttgtggagaac
tcttaccttcgaggcctgacaccacaggaatttttcttccatgctatgggtggtagagaa
ggtttaattgatactgccgtgaaaacttctgagacgggatatatccaaaggaggctcgtg
aaggctatggaggacattatggtgaaatatgatggtactgtgcgaaactccctgggcgat
gtcattcaattcttgtatggagaggacggcatggatgctgtttggattgaatcccagaaa
ctggactccctgaagatgaaaaaggatgagtttgataatgtatttcgttatgaactgaat
gatatgaactggaagcctaattacatgctgcctgaccatgttgaggatttgaaaaccatt
cgtgaattcagaaatgtgtttgaggcagagcttcagaaattggaagctgacagattacag
cttgggcaagaaattaccacaactggcgagggtacatggcctatgcctgtcaatctcaag
cggcttatctggaatgctcagaagactttcaagattgatttaagaaaaccttctgacatg
cacccaatggaaattgtggaagcaattgataagctgcaagaaagactcaaggttgtcccc
ggcgacgacgccatgagcattgaggctcagaagaacgctactctgctcttcaatatcctg
cttcgcagcacatttgctagcaagagggtcttgaaagaatacaggcttacaaaggaatct
ttcgagtgggtcatcggtgagattgaatcgagattcctccagtctttggtggctcctggt
gaaatgataggatgtgtggctgcacaatccattggagaaccggcgactcagatgacgctg
aatactttccattatgctggtgttagtgctaagaatgttacccttggtgttcccagatta
agagagatcatcaacgtcgccaagaagataaagactccatcgctgtctatcttcctaaag
cctggggtgaacagcaggaaagaatcagccaagaatgtccagtgtgccctggagtacacc
acgctacgtagtgtgacccatgccactgagatatggtatgatcctgatcctctaggaacc
ctcattcctgaggatgtcgactttgtcaggtcatactatgagatgcctgatgaggatgtc
gacccggataagatgtctccttggctgctgcgtattgaactgaaccgtgagatgatggtt
gataagaagttgagcatggctgatattgcagagaagatcaatcatgagtttgatgacgac
ttgtcatgcatattcaacgatgacaacgcggataagctcatccttcgtgtccgcatcgca
aacgacgaagctcctccaaaaggaggagaggcacagggtgaatctgccgaggacgacgtc
ttcctcaagaagattgagggtaacatgttgactgagatggcccttcgaggcattccagat
atcaacaaggtcttcatcaaaaaggggaaggtgaataaatttgatgagaaggaaggtttc
aaaggagaagaggagtggatgcttgatacagaaggtgtaaacctcttggccgtcatgtgt
catgaggacgttgatccttcaaggacaacaagtaatcatttgattgaagtgattgaggtt
cttgggatcgaggctgtccgcaggtccctcttggatgagctgagggtggtgatatctttt
gatgggtcttatgtgaactaccggcatctggccattctctgcgatacaatgacgtacaga
ggtcacctgatggcgattaccaggcacggcataaatcgtaatgacacagggcctctcatg
agatgttcttttgaagagacggtggatatcctgcttgatgctgctgtatatgcggaatct
gattacttgagaggtgttacagagaacattatgcttggccagcttgctcctattggtaca
ggagggtgtggattgtatctgaatgaccagatgctgaagcaggccattgagctccaactc
ccgagctatattgacactctggactacggtgtcacaccggcgcgttcacccatctccggg
acaccgtaccatgatggaatgatgtcgccattgctgagcccgaatttccgggcttccccc
ctctctgatgcacagttctcgccgtatgttggcggcatggcgttctcacccatgccgtcg
aactacagcccttcctctgggggttacagtccatcttctccggtgttcagcccagggcca
ggacacagttacagccccacttctccgtcatacagccccgcatcacccagctacagccct
gcatcaccatcatatactcctggctctccttcctacagtccgagcagtccatcatactct
ccaaccagcccgtcatactctccgacatctccgagctacagccccacatctcctagctac
agtccgacatctccgagctacagccccacctcgccaagctatagtccaacctcaccagca
tactgcccgacatctcctgcatacagcccgacctctccagcatactgcccaacatctcct
gcatacagcccgtcgtcgccatcttataatccaacgtcgccatcttatagtccgacatct
ccttcatacagcccgacttcaccatcttatagcccgacgtcgccatcatacagccccaca
tctccctcatacagcccttcatcgccaacttatagcccgacgtcgccctcatacagaccg
acatcgccctcgtacagcccgacatcacctgcatacagtccgacatctcctggttactgc
ccgacgtcaccgagctacagccctacttcacctagctacagcccttcttcggctaagtac
agtccttcgcatatctattctccaagcagcccaaggatgatgagcccatacagtcagacg
tctccaaactacagcccaacctcaccgtcctactcgcccacctcaccgtcgtatgcgcaa
ccaagcccgtcatacagcccgacaagcccgatcactacctctggaggacctagcccagat
tacaccccaacttctccaaactacagccccaccgcaagctactctcccaccgcaccgggc
tactcaccgacatccaccgagccgcaaactagtgacaaggacaagggggctgctccttga
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integrated database retrieval system
