Triticum aestivum (bread wheat): 123048125
Help
Entry
123048125 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 12-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123048125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123048125
03036 Chromosome and associated proteins [BR:
taes03036
]
123048125
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123048125
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123048125
mRNA degradation factors
5'-3' decay
Decapping complex
123048125
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123048125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Rtt102p
EPL1
DAP_epimerase
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
123048125
NCBI-ProteinID:
XP_044327227
UniProt:
A0A3B5XZ28
LinkDB
All DBs
Position
1A:complement(313520602..313526618)
Genome browser
AA seq
525 aa
AA seq
DB search
MHHPRARYPPGYDYGGGGGGRGGNGGGGGGGGGGGGNQNYYGGRNPHPQHHDYQQQQPHA
QRNSFPQQQQQQHTQRNSFSQQQQQQHQQQQHQQWLRRDQAAAQASGEGAARTVARLDAV
DTSSQDWKAQLNIPAPDTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEE
SIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCK
ELGKYLNIEVMVSTGGTSLKDDIMRLYQPVHLLAGTPGRILDLTKKGICMLNECSMLIMD
EADKLLAPEFQPSVEQLIRYLPASRQLLLFSATFPVTVKDFKQKYLPRPYVINLMDELTL
KGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHA
KMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSG
RFGHLGLAVNLITYEDRFNMYRIEQELGTEIKTIPPQIDLAEYCQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacccgagggcccggtacccgcccggctacgactacggcggcggtggcggcggc
cgcggcggtaacggcggcggcggaggcggtggaggaggtggcggcgggaaccaaaactac
tacggcggccgaaacccgcatccccagcaccacgattaccagcagcagcagccgcacgcg
cagaggaactcgttcccgcagcagcagcagcagcagcacacgcagaggaactcgttctcg
cagcaacagcagcagcagcatcagcaacaacagcatcagcagtggctgcggcgggaccag
gccgcggcccaggcgtcaggagagggtgcggccaggacggtggcgcgactcgacgcggtg
gacacgagctctcaagattggaaggcacagttgaatattccagctccagatactcgtttt
aggacagaggatgttactgcaacgaaaggcaacgagtttgaagattattttttgaaacgt
gagctacttatgggaatatatgagaagggatttgaaaggccatctcctattcaagaagaa
agcattccaattgctctaactggaagtgatattcttgcaagagcgaaaaacggcaccggg
aagaccgctgcattttgcattccagcactcgaaaagattgacccagagaaaaatgccata
caagttgttatactggtaccaacaagggaactagctctgcagacttcacaagtttgcaaa
gagcttggaaaatacctgaatattgaagttatggttagtactggaggaaccagcttgaag
gacgacattatgcgtttgtaccaacctgttcatttactcgccgggacacctggccgtata
ctagatcttaccaagaagggcatttgtatgctgaacgaatgttcaatgctcatcatggac
gaggcagacaagctgttagctcctgagtttcagccttccgtggagcaactcattcgttac
cttccagctagtcggcaactattgctgttttctgcaacctttcctgtaactgtcaaggat
tttaagcagaaatacctacctagaccctatgttattaatctgatggatgaactaacactg
aaaggaatcacacaatactatgccttcgtagaagaaaggcaaaaggttcattgtctgaac
acgcttttctcaaagcttcaaataaatcagtctattatattctgcaactctgttaataga
gttgagctactggcaaagaaaatcactgaacttggctattcgtgcttctacattcatgct
aaaatgttgcaagaccaccgaaaccgggtgtttcatgattttcggaatggtgcttgcaga
aaccttgtttgcacagatctttttaccagaggaattgacattcaagctgttaatgttgtc
attaattttgacttccccaagactgctgaaacatatttgcatagggttggtcgttctgga
agatttggacaccttggtttggcggtgaacttaatcacttatgaggaccgtttcaacatg
tataggattgagcaagaacttgggacagaaataaaaacaatacctccacagattgacctg
gcggagtattgccaatga
DBGET
integrated database retrieval system
