Triticum aestivum (bread wheat): 123052047
Help
Entry
123052047 CDS
T07757
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123052047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123052047
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123052047
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123052047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
IBR
OB_NTP_bind
DEAD
AAA_19
zf-RING_UBOX
AAA_22
SLS
zf-C3HC4_2
RRM_1
Arc_MA
zf-RING_5
ResIII
ABC_tran
gp37_trimer
AAA_29
HA2_N
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
123052047
NCBI-ProteinID:
XP_044331034
LinkDB
All DBs
Position
2D:117454974..117467803
Genome browser
AA seq
1810 aa
AA seq
DB search
MRQSNHCRPFRPPDWGSPPPHCRPHHQQSHRQPQSAPRFAVILFRAGPNISTPTATEIDA
LVADLPSPPPDNLSVFSSGRDAARLLFRFLPAAAAAARELWSLRLEGLHLLTPYLPNAAL
AAHAFPLIASLFASHASRLLDTDLVSRSAARSAELAASIQSLEHRLRSRNSVRDFDQLHL
QKKTLEAEKDLVDAKIAEYKASMSSIRRAMLRGTDDEEEEGVDVFGIGEREDVDFARLHM
MMLRECRRLNEGLPIYAYRRKILNHIFNNQVMILIGETGSGKSTQLVQFLADSGLAANGS
IVCTQPRKIAATSLARRVDEESNGCYEDNFVLSYSTFLNSQDLNSKIIFCTDSCLLHHCM
NDTGLDGISYIIVDEAHERSLNTDLLLALIKKKLLDRLDLHLIIMSATADADKLADYFYG
CQTFHVKGRNFPVEINYVPDVSVEASSNAVPNSMCDACATASYVNDVVRMVSIIHKNEEE
GAVLAFLTSQLEVEWACENFSDASAVVLPMHGKLSHVEQSRVFKSYPGKRKIIFCTNMAE
TSLTIKEVKYVVDSGLAKESRFVPSSGLNVLKVNWISQSSANQRAGRAGRTGAGKCYRLY
SEADFSMMDVHQEPEIRKVHLGTAVLRILALGVKDARKFEFVDAPNPEAISMAVKNLEQL
GAVKHRLNCFELTDTGRYLVKLGIEPRLGKIMLDCFDVGLRKEGVVLAAVMANSSSIFCR
VGTDEEKHKADLQKVRLCHRDGDLFTLLAVYKKWEDGHDNRNMWCWQNSINAKTMRRCQE
TISELENCLKHELNIIIPSYWRWNPEAPTVHDKDLKRIILSSLTGNLAMFLGHERFGYQV
ISTGQVVNLHPSSSLLNYGIKPEWVVFTEILSVPNQYLVCVTAVDHDALYTIHPVSFIQH
LEEQKLQIKVISGLGTNLLRRFCGKYGQNQQKIISRLKEDCRDDRITVEINFQNNEVVLF
ATEQNMEKVFCTVNSALKCEGKILRNECLERNLFPGRPGSSPIALFGSGAEIKHLELGGR
YLTVEVLHQNAHDIDDKELIFLVDSIVSGVANFHKSTGSFRIASDGIKWGKFTFLKPENA
EDAVSKLNGIEFNGSSLKLVPVCTSDNRGLPFPAVRAKLCWPRRYSSGRALVTCASGEAE
FVVNDCFALGIGGRYIKCRVSTKYENCVFAEGIPMHVTEPELYDAFRSTTARRILNIRLL
RVKGNAIASPSVSTCEEELVREISPFMPNKSFPGQNFRVEVFPPEENDSLTRATITFDGS
LHREAARALDHLEGHFLPCCQPWQIIQCNHVFHSTLSCPVRVYNVISQEVASLLESFQSQ
KGVSYNFEKTENGIFRLKLTANATKTIADLRRPLEILMKGKTINHPDLTLSAVQLLLSRD
GVAHLKSIEQETGTYIMYDRQSLNIKVFGHQEQMAAAEVKLVHALRQLLEKKPLEICLRG
HNLPPDLMKKTVENFGVDLEGFNKEMPEIKVELHQHRHLLKVWGSKEDKRRVERMIFELA
SFKHSSLVQLASENVGGKEDNQRVDYSEPSEDACPICLCEIEDPFRLESCGHMFCLACLM
DQCESAMKSHDGFPICCLKTGCKEPLLVVDLKHLLSNEKLEDLFRASLRAFVASRAGMYR
FCPTPDCQSIYQVAAPDAETKPFSCGACYVEICTKCHFEYHPFISCEAYKEYKEDPDLTL
LEWRKGKANVKSCPSCGYTIEKADGCNHVECRCGSHICWVCLENFRSSEECYGHLRLILW
IRVFSGDVNGARSNNWTILIGDHGKKRTGGTQRHSRSKYSLLLSMLAERTIHEKLAAITD
LLVKMMSGKS
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaatccaatcactgccgccccttccgcccgccggactggggttctccgcctccg
cactgccgcccgcaccaccagcagagccaccgccagccgcaatcggccccgcggttcgcc
gtcatcctcttccgcgcgggccccaacatctccaccccgaccgccactgagattgacgcg
ctcgtcgccgatctcccctcgccgccccccgacaacctctccgtattctcctccggccgc
gacgccgctcgcctcctcttccgcttccttcccgccgccgcggccgcagcgcgcgagctc
tggtcgctccgcctcgagggcctccacctcctcacgccctacctccccaatgccgcgctt
gccgcccacgccttcccactcatcgcctctctcttcgcctcccacgcctcccgcctcctc
gacaccgacctcgtttcccgttctgccgcccgctctgctgagctcgcagcctccatccag
tctctggaacaccgcctgcgcagtcgcaattccgtccgcgacttcgaccagctccatctc
cagaagaaaacattggaggccgagaaggacttggtagatgccaaaattgccgagtacaaa
gcatcaatgagttccatacggcgtgccatgttacgtgggaccgatgatgaggaggaggag
ggggtggatgtgtttgggattggggaacgcgaggatgtggacttcgcgaggttgcacatg
atgatgcttcgtgaatgcaggagactcaacgaggggctaccaatttatgcataccgcaga
aaaattctcaatcacatttttaataatcaggttatgatcttaattggggagactggttct
gggaaaagcacacagttagttcagtttcttgctgactcaggtcttgctgctaatggctca
attgtctgtactcaacctcgaaaaattgctgccacgtcattggcacgtagagtggatgaa
gaaagcaacggctgctacgaagacaatttcgtgttgtcatattcaacctttttaaattct
caagacctcaattcgaagatcatattttgcacagatagttgtcttttacatcactgcatg
aacgacacgggcctggatggcatttcatatatcattgttgatgaagctcatgaaagaagc
ttgaacactgatcttcttttagccttgatcaagaagaagctgcttgataggttggatttg
catctcattataatgtctgccactgctgatgctgacaaacttgctgactacttttatggc
tgtcaaacattccatgttaaagggcgaaattttcctgttgaaattaattatgtcccagat
gtatcagtggaggcttcctccaatgctgtgccaaactctatgtgtgatgcttgtgcaact
gcttcttatgtcaatgatgttgtaaggatggtaagcatcattcacaagaatgaagaagag
ggtgctgtccttgctttcttgacatctcagctggaagttgaatgggcttgtgaaaatttc
agcgatgcaagtgccgtggtacttcctatgcatggaaagctttcccatgtagaacagagc
cgtgtttttaaaagctatcctggaaagagaaaaattatcttctgcacgaatatggctgaa
acatcactgacaataaaagaagtaaagtatgttgttgattctggactagccaaggagagc
agatttgtgcccagtagtggtctcaatgtattgaaagttaattggatttcccaaagttct
gctaatcaacgtgctggccgggcaggtcgaacaggagcagggaagtgttacaggctttac
tctgaagctgacttcagtatgatggatgtgcatcaagaacctgagatcaggaaagttcat
cttggcactgctgttctaagaatacttgctttgggtgttaaagatgcacggaaatttgag
tttgttgatgccccaaatcccgaagcaatcagtatggctgtgaagaatcttgaacagttg
ggtgctgtcaaacatagacttaattgctttgagctgactgatactggacgctacctggtc
aaattggggattgagccaaggcttgggaaaattatgcttgattgctttgatgttggtttg
aggaaggaaggtgtagttctagctgctgttatggcaaattctagcagcatattttgtaga
gtgggcaccgatgaggagaaacataaagctgaccttcagaaggtccggttgtgtcaccga
gatggagatcttttcactctacttgctgtttataagaaatgggaagatgggcatgacaac
agaaatatgtggtgctggcagaacagcatcaatgccaagaccatgaggagatgccaggaa
accatatcagaacttgaaaactgtctaaagcatgaactgaacatcattatcccaagttat
tggcgttggaatcccgaggctcccactgtgcatgataaggatctaaagagaattatccta
tcatcacttacaggtaatcttgccatgtttttaggacatgaaaggtttggttaccaggtg
atttcgacaggtcaggttgtgaaccttcatccctcatcctcattgctcaattatggcatc
aagccagagtgggttgtgtttacagaaattttgtcagtcccgaatcaatatttggtatgt
gtaaccgctgttgatcatgatgccttgtatacaattcacccggtgtctttcattcagcat
ctggaggaacaaaaattgcagataaaagtgattagtgggctcggtactaacttactgaga
aggttttgtggcaaatatggccaaaatcagcaaaagatcatctcgcgtctcaaggaagat
tgcagggatgaccgaataactgttgaaattaactttcaaaataatgaagttgtgttattt
gctacggaacagaatatggaaaaagtcttttgcactgtcaacagtgctttgaaatgtgaa
ggtaagatattgaggaacgagtgcctagagagaaatttatttcctgggaggcctggcagt
tctcctattgcactatttggttcaggtgctgaaatcaagcatttggaacttggggggagg
tatctaacagtagaggttttgcatcaaaatgctcatgatatcgatgacaaggagcttatt
ttcttggtggatagtattgtctctggcgttgctaattttcataaatccactggaagtttt
cggatagcctcagatggaattaaatgggggaagtttacatttctgaaacctgaaaatgct
gaagatgctgtttcaaaactcaatggcatagaatttaatggttcctcattaaaattagtt
cctgtatgtacttccgataatcgaggattaccatttcctgcggtgagagctaaattatgt
tggccacgtagatacagcagtggacgtgcactagtaacatgtgccagcggggaagctgaa
tttgttgtaaatgactgctttgccctaggaattggtggaaggtatattaagtgcagggtt
agtactaagtatgagaattgtgtttttgctgaaggaattccaatgcatgtcactgagcca
gaactatatgatgcttttcgtagcacaacagcaaggagaatccttaatatccgtttgctc
agggtcaagggaaatgccatagctagcccctctgtttctacatgtgaagaagaactggtc
agagaaatttctccattcatgccaaataagagttttcctggacagaattttcgtgttgag
gtgtttcctccggaggaaaatgattcactgacaagagcaactataacttttgatggaagc
cttcatcgagaggctgcaagagcactggaccatcttgaagggcactttcttccttgttgt
caaccttggcagataatacagtgcaatcatgtgttccatagcactctgtcctgtccggta
cgtgtttacaatgttatcagccaggaagttgcttctctgcttgagagtttccaaagccaa
aaaggtgtatcttacaattttgaaaagaccgagaatggcatttttcgattaaagctcaca
gcaaatgccacgaaaacaatagcagatttgagaaggccacttgagattttgatgaaaggc
aaaaccataaaccaccctgatctgacattaagtgcagttcaactgctcttgtcccgtgat
ggtgtagcacatttgaaatcaattgaacaagaaactggtacttacattatgtatgacagg
caaagtctaaatattaaagtctttggacaccaagaacagatggctgcagcggaggtgaaa
ttggttcatgcacttcgacaactacttgagaagaagcctcttgaaatttgtcttcgtggc
cacaacctccctccagacttgatgaagaaaacggtagaaaactttggagttgatctggaa
gggtttaacaaagagatgcctgagataaaggttgagttacaccaacaccgccatttactt
aaagtttggggcagtaaggaggataagcgaagggtggaaaggatgatctttgagttagcc
tcctttaaacacagttccctggttcaacttgcatcagagaatgttggaggcaaagaagat
aatcaaagggtggattacagtgagccgtcagaggatgcatgccctatttgcttgtgtgag
atagaagatccttttaggcttgaatcatgtgggcacatgttttgtctggcttgtctgatg
gatcagtgtgaatctgcgatgaaatcacatgatgggttccctatttgttgcctgaaaact
gggtgcaaggagcctctccttgttgtagacctgaagcatctcctgtcaaatgagaagctg
gaggacctattcagagcttccttgagggcatttgttgcatctagagcaggaatgtaccgc
ttctgcccaacacctgattgccaatccatctaccaagtggcagctccagatgcagaaacc
aaacctttttcttgtggggcttgctatgtggagatatgcaccaagtgtcatttcgagtat
catcctttcatatcatgcgaggcttacaaagaatacaaggaagacccagacttgacgctg
cttgaatggcgcaaagggaaggcgaatgtgaagagctgcccttcctgtggatacacaatt
gagaaagctgatggctgcaaccatgttgagtgcaggtgcggcagccacatttgctgggtt
tgtttggagaacttcaggagcagcgaggagtgttatggccatctcaggcttattctctgg
atcagagttttttctggtgatgttaatggggctagatcgaataattggaccattctcatt
ggagaccatgggaagaagcggaccgggggcacgcaaagacattcacgcagcaagtacagt
ctgctattgtcaatgcttgccgaaaggacgatacatgagaagctagccgccattactgat
ctgcttgtgaaaatgatgtcagggaaatcctag
DBGET
integrated database retrieval system
