Triticum aestivum (bread wheat): 123053903
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Entry
123053903 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 6-like isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123053903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123053903
03036 Chromosome and associated proteins [BR:
taes03036
]
123053903
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123053903
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123053903
mRNA degradation factors
5'-3' decay
Decapping complex
123053903
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123053903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
123053903
NCBI-ProteinID:
XP_044333445
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All DBs
Position
2D:complement(473472507..473479779)
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AA seq
508 aa
AA seq
DB search
MDQRARHPPGIGNGRGGNPNYHGRGPPPTQQHHQQPSPPSPQQAQGHPQQYMQRQSQHSQ
HSQHHSQQLQHQQWLRRNQTAGEAASGAARASEHHAPAAADDADLSSQDWKAQLKLPPPD
TRYQTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN
GTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGT
SLKDDIVRLYQPVHLLVGTPGRVLDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL
IRYLPSSRQILMFSATFPVTVKAFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVH
CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG
ACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDR
FNLYRIEQELGTEIKPIPPQIDRTIYCQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgggcgaggcaccctcccggcatcggcaacggccgcggcgggaatcctaac
taccacggccgtggcccgccgccgacgcagcagcatcaccagcagccgtcgccgccttcg
ccgcagcaggcgcaggggcacccgcagcagtacatgcagcggcagtcgcagcactcgcag
cactcgcagcaccacagccagcagcttcagcatcagcagtggcttcggcggaatcagacc
gctggcgaggccgcctcgggcgccgccagagccagcgagcaccacgcgccggctgccgcc
gatgacgccgatttgagttcgcaagactggaaggcccaattgaagcttccacctccagat
acacgctaccagaccgaggatgtcactgcaactaagggaaacgaatttgaagactatttt
ctgaagcgtgaacttcttatgggcatatatgagaaaggatttgaaagaccgtctcctatc
caagaagaaagcattcctattgcattaaccggcagcgacattcttgcaagagcaaaaaat
ggaaccggcaagactgctgcattttgtatacctgcgctagagaagattgatcaagacaaa
aatgctattcaagttgttatattggtccccacgagggaattggctttacaaacatcacaa
gtctgcaaggaacttgggaaacacttgaagattcaagtcatggtcactactggaggaaca
agcctaaaggatgatattgtccgtctttatcaacctgtgcatttacttgtggggacgcct
ggtcgtgttttggaccttacgaagaaaggcatttgcattctgaaggactgttcaatgctt
attatggatgaggcagacaagcttctttctcctgagttccaaccttccgtggagcagtta
attcgataccttccatcgagtcgacagattctgatgttctctgcaacattccctgtgact
gtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaa
cttacactgaagggaattacccaattctacgcctttgttgaagaaaggcagaaagtccat
tgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgtaactcc
gtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgcttctac
atccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggc
gcatgcaggaaccttgtgtgtacagatctttttacaaggggaatagatatccaagctgtt
aatgttgttatcaattttgatttccccaagaccgctgaaacctatctccacagggttggt
agatctgggagatttggccaccttggcctggctgtgaatctgatcacctacgaggatcgt
tttaacttgtatcggattgagcaggagcttggaactgagataaaacccatacctcctcag
atagaccggacgatatactgccaatag
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