Triticum aestivum (bread wheat): 123053966
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Entry
123053966 CDS
T07757
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123053966
03015 mRNA surveillance pathway
123053966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123053966
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123053966
mRNA cycle factors
P-body specific factors
123053966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
RskA_N
Motif
Other DBs
NCBI-GeneID:
123053966
NCBI-ProteinID:
XP_044333528
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All DBs
Position
2D:complement(481057027..481070251)
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AA seq
1172 aa
AA seq
DB search
MEHMENESHEGKKQDEEGHHNNEVVRLEEYKKLIDVKTALRQSNLNPERPDASHLRTLDS
SIKRNTAVIKKLKAINDEQKDGLMEELKSVNLSKFVSEAVSYICEAKLRSADIQAAVQIC
SLLHQRYKDFSPCLIQGLLKAFFPGKAGDDIDPDKNSRAMKKRSTLKLLMELYFVGIVED
ASTFINIIKDLTSVEHLKDRETTQTNLTLLASFARQGKHFLGLQKHGQEAYDEFFMGLNI
TDDLKTFFKKSLSSYYDAAVAILMSEHASLRAMESENAKILNVKGELSDENTALYEKLRK
SFDQLLRCVSSLAEALDMQPPVMPDDGHTTRVTTASELSPSGKHFSAVEPIWDDEDTKAF
YESLPDLRVFVPGVLLGEAEPKLVDQHGKVHEQTGEHKLEQGTEVQNNAEASVPEHQLEG
KTNVGSKNREKKDKTGKEISKEKEADQKGDIEREKVRVKDGASLDNLLQRLPRCVSRDLI
DQLTVEFCYLNSKANRKKLARALFNVPRTSLELLPFYSRLVATLSTCMKDLPSMLLSMLE
EEFNFLMNKKDQIKIETKIRNIRFIGELCKFNIAPSGLVFSCLKACLDDFSHHNIDVACN
LLETCGRFLYLSQGTTVRMSNMLEILRRLKNVKNLDPHHSTLVENAYYLCKPPERSARVS
KVRPPLHQYIRKLLFSDLDKTSVQHVLRQLRKLPWAECEEYLVKCFLKVHKGKYSQVHLI
ALLTAGLSHYHDDFHVAVVDEVLEEIRVGLELNDYAMQQRQLAHMRFLGELYNYEHIDSS
VIFDTLYLITVFGHGTLEQDLLDPPEDFFRIRMIVTLLQTCGHYFDRGSSKRKLDRFLLH
FQRYILNKGPLPLDVEFDVQDMFAELRPNMTRYSSPELLASALAELEENEKTKQSESAAS
DASCKSSANRPDKNGRGHGEVADSESYSGSRSIYHDGSEDGDSLYEENSDDRSGNGVVDD
DDAMPSGSDEEERVQVRHKVVQVDPKEQEDFDRELRALLQESLESRKLEPRVKSTLNMTV
PMKIVEGSKDSRATERESGEELTAEENGNAGGGSEVKVCVRVLVKKGHKQQTRQMLIPGD
CSLVQSTKQQEAALLEEKQNIKQKILEYNEREEEEFNASAFQTGFWGQGGSSAGGSIGSA
GRGSWDGSNRGGRGRQRYYIAGGIYHGYGRGR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggagcacatggaaaatgagagccacgaggggaaaaagcaagatgaagaggggcatcat
aacaatgaggtggtccgtcttgaagaatacaagaagcttattgacgtaaagacggctctc
cgccagagtaacctaaaccctgagaggcctgatgcaagtcacctgagaactcttgattcc
agtattaagcgcaacacagcagttatcaagaagctcaaagcgataaacgatgaacaaaag
gatggcttaatggaagaattgaaaagtgtgaatctaagcaaatttgtcagtgaagcagtt
tcttacatttgtgaggccaaacttcgttctgctgatatacaagctgctgttcagatttgc
tcgctgcttcatcaaaggtacaaggacttctctccttgccttattcaaggactgctgaaa
gccttctttccagggaaagctggagatgatatagatccagataaaaactcaagggccatg
aagaaaagaagcacactgaagcttcttatggaattgtattttgttggaattgttgaagat
gctagtactttcataaacattataaaggatctgacgtcggtggagcatttgaaggaccgt
gaaacaactcagacaaatttgactctccttgctagttttgctcgccaaggaaagcatttt
cttggattacaaaaacatgggcaagaagcttatgatgagttttttatgggcctcaatatt
accgatgatctgaagacgttctttaagaaatccttgagctcttactatgatgccgcagtt
gcaattctcatgtcagaacatgcgtctcttcgtgcaatggagtctgaaaatgcaaagatt
ttaaatgtcaaaggggaactaagtgatgagaatactgccttgtatgagaagcttcggaaa
tctttcgatcagttattgcgctgcgtttcatccttagctgaagctcttgatatgcaacct
cctgttatgccagatgatggacatacaacaagggtaactacggcgtcagagttatcccct
tctgggaaacatttttctgcagtagaacctatctgggatgatgaagacacaaaggcattt
tatgagtctttgcctgatctcagagtattcgtgcctggtgtactattgggagaagctgaa
ccaaagttggtagatcaacatggaaaggttcacgaacaaactggtgagcataaattggaa
caaggaactgaagttcaaaacaatgctgaagcttctgtccctgagcaccagttggaagga
aaaacaaatgttggatccaagaatagagaaaaaaaagataaaacaggcaaagaaatttct
aaagaaaaagaggctgatcaaaaaggagatattgaaagagaaaaagtaagagtcaaagat
ggcgcaagtttggacaacctgcttcagaggctgccaagatgtgtgagccgagatctaatt
gaccaattgacggtagagttttgctatctgaattctaaagcaaacaggaagaaacttgca
cgagctttattcaatgttccaaggacttcgttggaactgttacctttctattcccgttta
gttgccactttgtccacatgcatgaaggatctcccaagtatgctcttgtcaatgcttgaa
gaagagtttaactttttgatgaacaagaaggatcagatcaaaatcgaaacaaaaattaga
aatattagatttattggggaattgtgcaaattcaatattgctccatcaggccttgttttt
agttgtttgaaggcttgcctagatgattttagccatcataacattgatgtggcctgcaat
cttcttgagacctgcgggcgctttctttatctctcacaaggaactacagttcgcatgtca
aacatgctggaaatactgaggaggttgaaaaatgtgaagaatttggatccacaccacagc
acacttgtagagaacgcctattacttatgcaaaccaccagaaagatctgccagagtctct
aaagtccggccacctctgcatcagtacataaggaagctgcttttctcagatcttgataaa
acaagtgttcagcatgttcttcgtcagttacgcaagttaccttgggctgagtgcgaggag
tacctggtgaaatgttttctcaaagttcacaagggaaaatatagccaagttcatctgatt
gctcttctaactgctggtcttagtcactatcatgatgattttcatgtggctgtggtagat
gaggttctagaagagattagagttggacttgagctgaatgactatgcaatgcaacagcga
caacttgcccacatgcgattccttggggagctatataactacgagcatattgattcatca
gttatatttgacacattgtaccttattactgtatttggtcacggaacactggaacaagat
ctgcttgatcccccagaagatttcttcaggataaggatgattgttacacttctccagacg
tgtggtcactattttgatagaggctcttcaaaaagaaagcttgacagatttttgctacat
tttcaaagatatattctgaacaaagggccattgccacttgatgttgagtttgatgtgcag
gacatgtttgctgagctacggcctaacatgactaggtattcatctccagaactgttggct
tctgctctggctgagcttgaagaaaatgagaagacgaaacaatccgaaagtgctgcttct
gatgccagctgcaagagctcagcaaacaggcctgacaaaaatggcaggggccacggagaa
gtagcagacagtgaaagctattcaggtagcagaagcatctatcacgatggaagtgaagat
ggagattctctgtacgaagaaaactcagatgacaggtcagggaatggagtcgttgatgac
gatgatgccatgccttctggttctgatgaagaagaaagggtccaggttagacataaggtg
gtgcaagttgaccctaaggagcaagaagactttgatcgggagctgagggcccttctacag
gaaagcttggagtcgcgtaagttggagccacgggtgaaatccactttgaatatgactgta
ccgatgaaaatcgttgaggggtcaaaggactcgagagccactgaaagagagagtggagaa
gagcttacagctgaggaaaatggtaatgctgggggcggtagtgaggtcaaggtgtgcgtc
agggtgcttgtgaagaaagggcacaagcagcagacaaggcaaatgctcattcctggggac
tgctcactcgttcagagcacaaagcagcaagaggcggctctgctagaggagaagcaaaac
atcaagcagaaaatccttgaatacaacgagagggaggaggaagaattcaatgcatcagca
ttccaaaccgggttctggggtcaaggaggaagcagcgcaggcggcagtatcggctcggcc
gggcgtggttcctgggacggttcaaacagaggcggccgcggccggcagcggtactacatc
gctggcgggatctaccatggctatggcaggggaaggtga
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integrated database retrieval system
