Triticum aestivum (bread wheat): 123054307
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Entry
123054307 CDS
T07757
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123054307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123054307
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123054307
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
123054307
NCBI-ProteinID:
XP_044333977
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All DBs
Position
2D:537551483..537554958
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AA seq
330 aa
AA seq
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MANLQSSASEPSSFAGASPPSPSSIGGGAGGAASAAQEPRKMASAEQLVLDLCDRELREN
ALLELSKKREIFQDLAPLLWHSFGTIAALLQEIVSIYPALSPPVLSAGASNRVCNALALL
QCVASHPDTRIPFLHAHVPLFLYPFLNTFSKTRPFEYLRLTSLGVIGALVKVDDTEVIGF
LLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDIGLRYVCATPERFYAVGSVLGNMV
ISLADQPSTRLLKHIIRCYLRLSDNPRACVALHNCLPDMLKDGTFNISLRDDPATRRWLQ
QLLHNVTVGGMGGPGMGVPPQPGLDHMMGI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgcagtcttccgcctccgagccctcctccttcgcaggggcctcgccgccg
tctccctcctcaatcggtggaggcgccggcggcgctgcctcggcggcgcaggagcccagg
aagatggcgtcggcggagcagctggtgctcgacctctgcgaccgcgagctgcgcgagaac
gccctcctcgagctatccaagaaacgagagatatttcaagacctggccccgcttctctgg
cactcttttggcacaattgcggcactgcttcaggaaattgtgtcgatctaccctgcactt
tcacccccagttttgtcggcaggtgcatcaaaccgagtctgcaacgcacttgcacttctt
cagtgtgttgcatcgcaccctgataccagaatccctttcttacatgctcatgtgcccctg
ttcttgtacccgttcctgaatacattcagcaagacaaggccttttgagtacttgcggctt
accagcttgggtgtcattggtgctcttgttaaggttgatgatactgaagttattggcttt
ctgctgcaaactgaaataattcctctgtgcttgcgtaccatggagatgggcagtgaactg
tcaaaaaccgtcgctaccttcattgtccaaaagattctgctggatgatattggactgcgt
tacgtgtgtgccacccctgagcgtttctatgctgtgggcagcgttttaggaaatatggta
atttcacttgctgatcagccttccacaaggttgctcaagcacattatccgatgttacctc
aggctgtcagataaccccagggcctgtgttgcactgcataattgcctccctgacatgctg
aaagatgggacattcaacatttctcttagggatgaccccgcgacaaggcgctggctccag
caactgctgcataacgtgacagtgggcggcatgggaggacctggcatgggggtgcctccc
cagccaggcctggatcacatgatggggatatga
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