Triticum aestivum (bread wheat): 123054472
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Entry
123054472 CDS
T07757
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123054472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123054472
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123054472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
123054472
NCBI-ProteinID:
XP_044334186
LinkDB
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Position
2D:complement(557009758..557015398)
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AA seq
680 aa
AA seq
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MPRKVVSGPDYDDDYADYEDYEDDYDDYDETEHADVKPPVKEKESSKKSSNTVPVLWKCS
MCTFDNHETMVYCEMCGVFRESFVKSGKDVSIKVESVNGISNNSGTSALSNSDSTKMPAK
TSTTNFDGDSERKYASTSHDKVNSTQLASVGSSSSTGKKKQPVIFDNNVPIERTTQLNAD
HFQLKEDQGSSRASSSAQNKGSMETLSSDISQLSIERNNVNVAQPLPEEYKPEGWMLADQ
ESGVLSQLNLAIVGHVDSGKSTLSGRLLHLLGKISKRDMHKNEKEAKEKGKGSFAYAWAM
DESTEERARGITMTVAVAYLETKKYRVVLLDSPGHKDFVPNLISGATQADAAILVVDAST
GSFESGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIGYSKDRLEFIKVRLGSF
LRSCNFRDSAVTWIPLSAVENQNLIKSPSDARFTSWYQGSCLLDAIDSLQLPSRDVSKPL
ILPICDVIKSQSTGQLAAFGKLETGAIRNGSKVLVLPCEEVATVKTIERDSSSCSIARAG
DNVAVILQGIDGSRIIPGGILCHPGFPVPVANYLELKIRVLDIAIPILIGYQVEFHIHHV
KEAARVTKIVALLDKTGKPSKTAPRFLKSKQNAVVQVTLDQAVCVEEFSKCRALGRAFLR
SSGSTIAVGIVTKIMRQDQH
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggttgtctccgggcccgactacgacgacgactacgctgattatgaggat
tatgaggatgactatgatgattatgatgagactgaacatgccgatgttaagccccctgtg
aaggagaaagaatcatcgaagaagtcctcaaatacagtgcctgtgctttggaagtgctcc
atgtgcacattcgataatcatgaaactatggtatactgtgagatgtgtggggttttccgg
gaatctttcgtcaaatctggcaaggatgtttcgatcaaagtagaatctgtcaacggaata
tcaaacaattccgggacatctgctctgtcaaactctgattctaccaagatgccagcgaag
acttctactacaaactttgacggtgattctgagagaaagtatgctagcacatctcatgat
aaagtcaattccacacagttggcgtctgttggtagctcatcaagcactggaaaaaagaaa
caacccgtaatctttgacaataatgtgccaatcgagaggacaactcaattgaatgctgat
cattttcagctaaaagaggaccagggtagtagtagggctagcagttctgctcagaataag
ggttccatggagacactttcttctgacataagccagctaagtatcgaaaggaataatgtc
aatgttgcacagcctttacctgaagagtataagcctgaggggtggatgctagctgatcag
gagtccggggtgctgagccaactaaaccttgcaatagtgggtcatgttgattctggcaag
tcaacactctctgggagattgctacacctattagggaagatatcgaaaagagatatgcac
aaaaatgagaaggaggctaaggaaaaaggaaaggggtcatttgcttatgcatgggccatg
gatgagagtactgaagaaagagcaagaggtatcacaatgacagtggctgtcgcctatttg
gagaccaagaaataccgtgtagttttgcttgactctcctggccacaaagatttcgtgcca
aatttgatatctggtgcaacacaggctgatgcagctattcttgtggttgatgcatcaact
ggttcttttgaatctggtatggatggggaaggagggaaaagtgttgggcagacaaaggag
catgctcagcttattagaagctttggtgttgagcaacttattgttgcagtcaacaagatg
gatgctattgggtactcaaaagataggttggagttcatcaaggtacgacttggtagtttt
ctgcggtcatgcaacttccgggattcagctgttacctggattcctcttagtgctgtagag
aaccagaatttgattaaatctccttcagatgctcgttttacctcctggtatcaagggtcg
tgtctcttggatgctatagattccttgcagcttccttctcgggatgtttcaaagcccctc
attcttcctatatgtgatgttatcaaatctcagtcgacaggacaactggcagcttttgga
aaattagaaactggcgctattcgaaatggttcaaaggtattggttttaccttgtgaggaa
gtggcgacagtgaaaaccattgaacgagactctagttcatgcagcatagcgagagctggt
gacaatgtagcagttattttacagggaattgatggtagtcgaataatacctggcgggatt
ctttgtcaccctggtttccctgtgcctgtagccaactacttggagcttaagattcgagtg
ttggacatcgccatcccaattctcattggttatcaggtggagtttcacatacatcatgtg
aaggaagctgcaagagtaacgaaaattgtggcgttgcttgacaagacaggcaagccaagt
aaaacagcaccgcggtttcttaaatcaaagcagaatgctgttgtgcaggttacgctagat
caagcggtctgtgtcgaggaattctcgaaatgccgagctcttggaagggcattcttaagg
tcgtctggaagcacgatcgctgtcggtatagtgactaagataatgaggcaggatcagcac
tag
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