Triticum aestivum (bread wheat): 123055169
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Entry
123055169 CDS
T07757
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123055169
09122 Translation
03013 Nucleocytoplasmic transport
123055169
03015 mRNA surveillance pathway
123055169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123055169
03041 Spliceosome [BR:
taes03041
]
123055169
03009 Ribosome biogenesis [BR:
taes03009
]
123055169
03012 Translation factors [BR:
taes03012
]
123055169
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123055169
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123055169
mRNA cycle factors
Stress granule specific factors
123055169
Spliceosome [BR:
taes03041
]
Complex C
Other components
EJC/TREX
123055169
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123055169
Translation factors [BR:
taes03012
]
Eukaryotic type
Initiation factors
eIF-4
123055169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA
AAA_22
Helicase_RecD
Utp25_C
TniB
Motif
Other DBs
NCBI-GeneID:
123055169
NCBI-ProteinID:
XP_044335074
LinkDB
All DBs
Position
2D:631562153..631566751
Genome browser
AA seq
402 aa
AA seq
DB search
MAAAGSSRRGPMDDDKLNFETSAGVDVVGSFDAMGIREDLLRGIYGYGFEKPSAIQQRAV
VPIIAGRDVIAQAQSGTGKTSMVSLSVCQVIDTNIHEVQALILSPTRELATQTERVMQAV
GNYMSVSVHACVGGKSIGEDIRKLEAGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDEA
DEMLTRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVRILVKRDELTLE
GMKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRTNNFTVSAMHG
DMPQKERDAIMSEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggctcctccaggcgcgggccgatggacgacgacaagctgaacttcgag
acctcggcgggggtggatgtcgtgggaagcttcgacgcgatgggcatccgcgaggacctg
ctccgcggcatctacggctacggcttcgagaagccctctgccatccaacagcgcgccgtc
gtccccatcatcgccggccgcgacgtcatcgcccaggcccagtccggcaccggcaagacc
tccatggtctccctctccgtctgccaggtcatcgacaccaacatccacgaggtgcaagca
ttgatactgtcaccaactagggaactggccacacaaacagagagggtgatgcaagctgtt
gggaactacatgagtgtctctgtgcatgcctgtgtcggtggcaaaagtatcggtgaggat
attaggaagcttgaggctggagtgcatgttgtttcaggaaccccaggcagagtatgtgat
atgatcaagagaaggaccttgcgcacaagagccatcaagctcctagtcctggatgaagcc
gatgagatgttgaccagaggttttaaggatcagatctatgatgtctacagatacctcccc
ccagaacttcaggttgtcttgatctctgcaactctgccccatgacatcttggagataact
agcaagttcatgactgatccagtcaggatccttgtaaagcgtgatgagttgaccctagag
ggcatgaaacaattctttgttgctgttgagaaggaagagtggaagtttgatacgctgtgc
gatctttatgatacactgaccatcacccaggctgtcattttctgcaatactaagagaaag
gtggattggcttactgaaaggatgcgcaccaacaactttacagtatcagctatgcatggt
gacatgcctcaaaaggaaagggatgcgattatgagtgagttcaggagtggcacgacccgt
gttctgatcacaacagatgtttgggctcgagggctggatgttcagcaggtctctcttgtc
attaattatgatctcccgaataatcgtgagctttacatccatcgcatcggtcgctctggg
cgttttgggcgcaagggtgtggcgatcaactttgtgcgcaaggacgacatccgcatcctg
agggacattgagcagtactacagcacgcagatcgatgagatgccgatgaacgtcgccgat
ttgatctga
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integrated database retrieval system
