Triticum aestivum (bread wheat): 123055210
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Entry
123055210 CDS
T07757
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
taes04812
]
123055210
Cytoskeleton proteins [BR:
taes04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
123055210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
eIF2A
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
PAN2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
123055210
NCBI-ProteinID:
XP_044335126
LinkDB
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Position
2D:complement(637457628..637466392)
Genome browser
AA seq
925 aa
AA seq
DB search
MTTNTKRAYKLQEFVAHASNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNSISSLPGH
TSAVESVAFDSTEVFVAAGAASGTVKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFAS
GSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDSAVKIWDLTAGKLL
HEFKSHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSTGPEMTGVRSMTFNPD
GRSLLCGLHESLKVFSWEPIRCHDTVDVGWSRLSDLNVHEGKLLGCSSNQSCVGIWVVDL
TRLEPHATGTSALLNGRSELKASSGGTMPLQNDSGSRANIGRSSALQNSENNLKASAGRL
SVSQNSDSAPKEIKPTASSGMVPSTPQRVGTGSSTRTAGNSTFASGGTTLKRSSLKSNST
SNLHNFSKTDVVPAAVIIPRTSSGADLGTGSRSYAADVAPVLSKASRRAEPATDPRTESA
DVAPAVVPRTSSRMEMASDSAPDAVSRVGRRLESAADCRKESADAAPVVPRATSRMEMAS
DSVPILPKAGRRFESATDSRKESTDEAPVVVPRATSRMEMASDSRREPSAGRVSPFRIQS
RYAEPRKSTNVKVDMDKVDVGSKDTESNDLTCQIFLPRRNGAVQTVIPEETREDVKHGTA
YRSGFAGSAESNTSHRNDNYVPRMRKPRDNCYIEVSRAGRTRSIVSNWEGRDQSPSHEEP
TTSNSALGAPRGRMYSSRGSSQAAETNIVTSEEDVLSVLIEEHDLFLSSTRSRLTKLQIL
HQMWQRNDIRGVFSALEKMSDHAVCADMASVLMEKSEAITLDLCTSILPVLADLLESKTD
RHVAVSLELVVKLVRTFGPVIHSTVSVGPSSVGVDLEAEQRRERCNLCFIELEKVKNKLP
SLMRRKGAASNTAQELSLVFQEIMS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaacaccaagcgcgcgtacaagctccaggagtttgtggcgcacgcgtccaat
gtcaactgcctcaagatcgggaggaagacctcgcgggttcttgtcactggaggagaggat
cataaggttaatctttgggctatcgggaagcccaattcgatatcgagtttaccagggcat
acaagtgctgtggagtcagttgcttttgattccacagaagtatttgtggctgcaggagca
gccagtggcacagtaaaattatgggatctagaggaggcgaagatcgtccgcacgcttact
ggacatagatcaaactgtatgtcagttgatttccatccttttggggaattctttgcctct
gggtctttggacactaatctgaagatatgggatataagaaggaagggctgcatccacaca
tacaaaggccacacaagaggggtgaatgctattaggttcacacctgatggccgttgggtt
gtgtctggtggcgaagatagtgcagtgaagatctgggatttgacagctggaaagttactg
catgagttcaaatcccatgagggtcaaattcagtgcattgatttccatccccatgagttc
cttctggcaacaggttcagctgataaaactgtcaagttctgggatttggagacctttgag
ttgattggatctactggacctgagatgacaggtgtaagatctatgacattcaatcccgac
ggaagatctctgttatgtgggttgcacgagagcttaaaggttttctcttgggaaccaata
agatgccatgatactgtagatgtgggatggtctagactatcggatctcaatgtccatgag
ggaaaacttcttggttgttcttctaatcagagttgtgttggaatatgggttgttgatcta
acgcgtcttgagccacacgcaactggtacttcagcattacttaatggccgttctgaattg
aaggcttcgtcaggtggcactatgccattacaaaatgacagtggttcaagggccaacata
gggcgatcatcagctctacaaaattcagagaataacttaaaggcttctgcaggaaggctc
tcagtttctcaaaactcagattctgcaccaaaggagattaagccgacagcttcaagtggc
atggtcccaagcactcctcaaagggtcggaactggctccagtactagaacagctggaaat
tcaacttttgcatctggtggcaccactttaaagagaagttcactgaagagtaacagcact
tctaatcttcataatttcagtaaaactgacgtggtgcctgctgctgttatcatcccaaga
actagctcaggagcagaccttggtactggttcaagaagttatgctgctgatgtggcccct
gttctttcgaaggcaagcagaagggcagagcctgctactgatcctaggacagaaagtgct
gatgtggcacctgctgttgttcccagaacaagttcaagaatggaaatggcctctgattca
gcacctgatgctgtttctagggttggcagaaggttagaatctgctgctgattgtaggaaa
gaaagtgctgatgcagcaccggtcgttcccagggctacttcaagaatggaaatggcctct
gattctgtacctattcttccgaaggcaggcagaaggtttgagtctgctactgattcaaga
aaagaaagcactgatgaagcgcctgttgttgttccgagagctacttcaagaatggaaatg
gcctctgattctaggagagaaccttctgccggaagagtgtcaccatttaggatccaatca
aggtatgctgaaccaaggaaatcaaccaatgtgaaagttgatatggacaaagttgatgtg
ggaagcaaagatactgaaagtaacgaccttacttgtcaaatatttcttcctcggaggaat
ggtgctgttcaaacagtgatccccgaagaaactcgtgaagatgtaaaacatggtacagct
tacaggtcgggatttgcaggttcagcagaatcaaatacgagccaccggaatgataattat
gttcctagaatgcgtaagccaagagataactgctacattgaagtttcaagagcaggaaga
acaagatcaattgtttctaactgggaaggcagggatcagtccccaagtcatgaagaacca
acaacaagcaattcagcgctgggggctcctagaggccgaatgtattcatctagaggaagc
agtcaagcagctgaaactaatattgtaactagcgaggaggatgttttatctgttctaatt
gaagagcatgatctatttttaagttcaacacgatcgcggctgacaaaattgcagattctg
catcaaatgtggcaaagaaatgacatcaggggtgttttctcagcgctggagaagatgtcc
gatcatgctgtatgtgctgatatggcaagtgttctgatggagaaaagcgaggctatcaca
ctagatctatgtaccagtatcctgcctgtccttgctgaccttctggagagtaaaacagac
aggcatgtagctgtatcactggaactggtggtgaagcttgtcaggacttttgggcctgta
atacattcaacagtatcagttggtccatcttctgttggtgtagatcttgaagcagagcaa
aggcgggagaggtgcaacttatgcttcatagaactggagaaagttaaaaataagcttcct
tcccttatgagaagaaaaggggcagcttcaaacacagcacaggagctcagtctcgtcttc
caggaaatcatgtcgtag
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