Triticum aestivum (bread wheat): 123055239
Help
Entry
123055239 CDS
T07757
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123055239
09124 Replication and repair
03420 Nucleotide excision repair
123055239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123055239
03400 DNA repair and recombination proteins [BR:
taes03400
]
123055239
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123055239
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123055239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
EAD1
Motif
Other DBs
NCBI-GeneID:
123055239
NCBI-ProteinID:
XP_044335159
LinkDB
All DBs
Position
2D:complement(639219710..639225594)
Genome browser
AA seq
451 aa
AA seq
DB search
MPQVMVVARNFMDMVAALPAAKLDMLYDSAFICEAVLRSFPPLAKKYVIQMLYVSAPMLA
AAMQEWVLDEYASKHKVAIDRLLQLRVFVEVRDRRKEVSYKMNNKFQANMQKYLVSGGCL
PREPLPFSVTGRLPTLVELENYALDQWECFLLQLINSSQVEKGTTFSSSMMKTFQRGLLS
SRDGEAAKLSENGFQFLLMETNAQLWYIMREYISSAEERGVDPTDLISFLLELSFHTQGA
AYSLSTLTEVQRVAIMDLMELGLVKLQQGRKDSWFIPTKLATNLSSSLSDSAASKEGIVV
VETNFRLYAYSASKLHCEILRLFSRVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFL
QQNAHPRVIDKIPIVPENVTDQIRLWENDRNRVEMVLSHVYEDFPSKDMFEQCCDHARDN
GYLLWEDAKKMRLIVNAEFHQEMREFLRRQR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgatggtggtcgcgcggaacttcatggacatggtggccgcactgcctgcc
gccaaactagacatgctctacgattccgccttcatctgtgaggctgtactcaggtcgttc
ccaccgctggcaaagaagtacgtgattcagatgttgtacgtgtcggcaccgatgcttgct
gcggctatgcaggagtgggtgctggatgagtatgcctccaagcacaaggttgccatcgat
aggttgctccaactcagggtatttgtggaagtacgtgacagaaggaaggaggtgagctac
aagatgaataataagtttcaagctaacatgcaaaagtatttggttagtggcgggtgtttg
ccaagggaaccactaccattcagtgtcactggcagattgcctacactcgtggaactagaa
aattatgctcttgatcaatgggagtgcttcttgctgcaattgatcaactcgtctcaagtt
gagaaagggaccactttcagctcgtctatgatgaagacgttccagcgaggtcttctgagt
tcaagggatggtgaagctgcaaagttaagtgagaatggcttccagtttctgctgatggag
acaaatgcacagctttggtatataatgagagaatacatttcatccgcagaggaacgtggg
gtggaccccacggacttgatatcatttctattggagcttagttttcatacacaaggagcg
gcttacagcctaagtactctgacagaagtccaaagagttgcaattatggatctgatggag
ctcgggttagtcaaactgcagcagggccggaaagatagctggttcatacctacaaaattg
gctacaaatctctcatcgagcttgtcagattcagctgccagcaaagagggtattgtggtt
gtggagacaaactttaggttgtatgcgtactctgcttccaagctgcactgtgaaattcta
cgtcttttttcaagggtagagtatcaactaccaaaccttattgtgggagctattacaaaa
gaaagtctgtatggtgcatttgataacgggatcaccgctgaacagataatttcattcctt
cagcaaaatgcccaccctcgtgtcatcgacaaaataccgatagtcccagagaatgttaca
gatcagattaggctgtgggagaacgaccgtaacagggtcgagatggtcctgtcacacgta
tacgaagatttcccgagcaaggacatgtttgagcaatgctgtgaccacgcaagggataac
gggtacttgctgtgggaggacgcgaagaagatgcgattgatagtgaacgcggagttccac
caagaaatgcgggagttcctccgcaggcaaagatga
DBGET
integrated database retrieval system
