Triticum aestivum (bread wheat): 123055300
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Entry
123055300 CDS
T07757
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123055300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123055300
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
123055300
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
123055300
NCBI-ProteinID:
XP_044335233
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Position
2D:643650016..643654233
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AA seq
203 aa
AA seq
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MVGASTSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVA
VWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
RYGPVISTIPQQLSRFQFNMVSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgcctcgacgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggagcccaagatggagaaggacacctccgtcgccgaccgccttgcccgcatg
aaggtcaactacatgaaagaaggaatgcggacaagtgttgaagcaatcctgctggtgcaa
gagcacaatcacccccacatactgttattgcaaattgggaacacattttgcaaacttcct
ggtggacgtttgaagcctggggaaaatgaaattgagggcctgaaaagaaagttgtgcagc
aaacttgcagtgaactcaccttcctttccacctaactggcaggttggtgagtgtgttgct
gtttggtggaggccaaactttgaaaccgtgatgtatccttattgccctccacatataacc
aagcccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgct
gttccaaggaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcag
cggtatggacctgtaatttccaccatcccgcagcagctgtctaggttccaattcaacatg
gtgagctcataa
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