Triticum aestivum (bread wheat): 123060090
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Entry
123060090 CDS
T07757
Name
(RefSeq) probable tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taes03016
]
123060090
Enzymes [BR:
taes01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
123060090
Transfer RNA biogenesis [BR:
taes03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
123060090
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
zf-ANAPC11
DUF5665
Motif
Other DBs
NCBI-GeneID:
123060090
NCBI-ProteinID:
XP_044338584
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Position
3A:41238676..41240205
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AA seq
294 aa
AA seq
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MDMSGPRWKKGKDGKDFAALAAAQPMSSIVAKLQSSLEGSKLVATLSSRGGDAVLGVNPQ
EAALLNRAAFGRALENVGAEKQWFQLGAEEVFYLHHALECIVVESANKDLMSQGELWDHL
CSASESFPEMYRAYSHLRSKNWVVRSGLQYGTDFVAYRHHPALVHSEFAVVVVPEGSGFG
GRCGRLKVWSDLLCALRASGSVAKTLLVLTISSNVCELRSPDCLERLVVHERTITRWIAQ
QCREQRCKPCREEAYTEEQDHAGETVVFNYWGLVLGFTVLSSLLVYKLRFRQSS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtctggtccaagatggaagaagggcaaagacggcaaggatttcgcagctctg
gcagcagcccaacccatgtcaagcattgttgccaagctccagtcttcactggaaggatca
aagctcgtggcgactttatctagcaggggcggggatgcggttcttggcgtgaacccgcag
gaagccgcgcttctgaaccgcgccgcctttggccgggcactggaaaatgtcggggccgag
aaacagtggttccagctgggcgctgaggaggtcttctaccttcaccatgctttggagtgc
atcgtggtcgagtcggcgaacaaggatctgatgagccaaggggagctgtgggatcacttg
tgctccgcatcagagtcgtttcctgagatgtacagggcgtactcgcatctcaggtcgaag
aactgggtggtgcggtcaggtttgcagtatggtacggatttcgtcgcttaccgtcatcac
cccgcgctcgtccactcggagtttgctgtggttgtggttccggaaggatcggggttcggc
ggtaggtgtggccgcctgaaggtgtggtctgatctactgtgcgcgctccgagcttctggc
agtgtggccaagacgctgctggttctgacaatctccagcaatgtctgtgaactgagatcc
ccagattgtttggaacggttggttgttcatgaaagaactattacaaggtggatagcccag
cagtgccgtgagcagcgatgtaaaccgtgcagagaagaagcatatacggaagaacaagat
cacgcaggagaaactgtagtgttcaactattggggtctagtactaggtttcacagttctt
tctagcctgcttgtatacaagctgagattccgacaatcaagctaa
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