Triticum aestivum (bread wheat): 123060434
Help
Entry
123060434 CDS
T07757
Name
(RefSeq) uncharacterized protein LOC123060434 isoform X1
KO
K19026
spatacsin
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123060434
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123060434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
123060434
NCBI-ProteinID:
XP_044339091
UniProt:
A0A3B6ED60
LinkDB
All DBs
Position
3A:complement(84120384..84143294)
Genome browser
AA seq
3113 aa
AA seq
DB search
MPISYEMEGGPTVLQLYKWKSLHPCLELSKFCEASISPTRSLFGLLSEHGDLVLSTVNVQ
PSQVESPMTLSDSSLPVFECFSSIPRVKSLAWGHCCDASSQLEVPAFSEFLVLSSDDSIT
VHAFCHSDKSAVTVNCDTKELHGEWKEWFPTKCSVPEDGESGARNCFRSFLTTISAAVCN
GKYQARFPLKSSLPHSAEVVSFSIYDITMSFLKFWLSSSAMKTRTETDSGSPEDLPSHGP
VAEASCSCQWECLKVLPSSSGYLIGLVLTPNESVNCEVHQHNAKNILVAILELNHWGIQW
NFVVDLQTAYDDVEPNPQWVDFQLSDIFLASINAVGFVAIWNAKTGHLISSFSVLDRCRI
DLEMPLPTVTNVGESTCVENVIGRMFKRLVLAPHSPLVAAVDEAGVVYVFYADDILNFKA
NAHEKFDEPSINHYGNNFAAWETAGHEIGSQTFCSHQPIRQGSLNPDKMVYDFSDRYNAG
VVGARKRRKYCKCNENQVDSWPSGFSTTSQMKDVVTYPSTMVGSAHVRRVVLPPCRSQEN
VISLSPFGLTRIFRSCNAEGHKHVKIIHTELLMASCSLDERDIDAGFLDRSLSYQKDFSF
AGESAVCSFQGYLYLISQDNLSVVLPSVSVSSFSSRIDATQFWQPGFSGGSACNALNLLS
VNRLRTRLEAWQIEVLDKALLYEGPSLADRLCWENGWDMKISRLRWVQLSLHYTNINDLE
QSLNMLAEVDLAEEGVLQLLLASVYRLLCSTRSDHEAAVSSKLMVLAVRFATRTIKAYGL
LKQKKDMPANSVKLHEMAFLLGVIRSIQGRITAKNQNSVRMQGDDKNSLKIGKEVLQNDS
PSPVVVVDGVSPELSAGLDAPDRQGSTSTAFEFVPGSNRLLALTQVESSLTTSHDNDTDQ
RTTQVGRPVTQGNIKDMMNRWEMNKFDLKTIVGEALQSGRLPLAVLQLQLLRQRESCSGD
DFDDVFSEVHEIGRSIVYDLLMKGESRLAVATLERLGDDIESDLRQLMQGTVRRSLRLQI
AEEMKQRGYMRSNEWKMLETLALIERFYPSSSFWDTYLGRENVIHDAVNIVTLPGEDKPV
LALHIRNHPAIECGDVDGAVLGSWVNVNDYADLKEFSQSNLSDGYWVCAAVWSDAWDQRT
VDRIILDQPCHISAQSDLPWESQFEYFVAHDDVGEVCKLLDMIPDSVLLEGILSINVDNS
RAGYSIVSDVSVPDYKMYICDSEELEPVCMEVPHVKIFRSLSNHESTSWMRMLMQEQLAK
KHIFMKEYWQSTTEIIPLLARAGILTNTAKIGPKKEASMPLIASEMPDDERHQACERALH
KLVIRFCVQYDSPYLLDLYLDNCNLILGEDSIPLLKEAAGDCKWAQWLLFSRVKGYEYEA
SFSNARWNLSQKMVNHGNLTAIEIDEILYTVDDMAERIGEMSALATLMYASPPIQKSICT
GSVNRNRGLSSQCTLENLGHCLQQFPTLWKTLRSTCFGQDGYGCLNYSPTNVSGKSAMSD
YLCWRYSIFSSAGGDTSLLQMLPCWFPKSIRRLIQLFEQGPFGMQLLSSAPSSEELFTHG
VTDYIYNTTGYSETNALSLEASIQKSVEELYSSLEEKDLRVEHHLHRGRALAAFRHLLGK
RASQLKSANARQVISTQSDVQADVQLILAPLSQTERSVLLSVAPLAITNFEDSTLVASCT
FLLELCGMCANMLRLDIAALQRISSYYNLAQQNKQSELSSPRSSGLHVLSHGADIAPALA
RALAEDYVQSDHLQILEQKQTSRGPKREQPSQPLIAILEHLERASLPLLDEGRTCGFWLL
SGIGDASLYRSQQNEASQHWNLVTEFCLAHHLPLSTKYLALLANDNDWVGFLTEAQRAGF
PIEVVIGVASKEIKDSRLRTHILTVLKNTLSNRRKSSSNVPSGSRDPFLLSVDGDDPMEL
FCILAVCERQKNPGEALLNKAKQMQWSLLALIASCFPDVTLLSCLSFWLEITAARELSLI
KVDCISSKVAKNVGSAVEVTNKLPSVSRNVEYRYNRKNPKRRRFLEASPDSFKSGFSLDI
ASGPNGTATSNPSDIDAHQERRKPTSEETDIPVDIDERLASLSSIVAVLCEQQLFLPLLR
SFDLFLPSCSLLPFIRSLQAFCQMRLSEASAHLTSFSARIKDEASQSNSFKEASSITGWV
VATAVKAADAVLSTCPSLYEKRCLLQLLAAVDFADGGSSSAYFGRSYWKINLAEPSLCKD
GDIYKWNDSMDDASLLAALEKDGRWEDARTWARQLESSGIAWESTFDHVTESQAEAMVAE
WKEFLWDIPQERAALWGHCQSLFMRYSLPPLQAGLFFLKHAEALGKEIPARELHEILLLS
LQWLTGTITKSSPVYPLHLLREIETRVWLLAVESETHSKADGESSVVSQSLAIGNSTSII
EQTADVITKIDSSMSLPSMKAAERNGMRDNNLSNHQHLHLFEYNSEATTTTNNARAKRRG
KTNLPLRRGVTDNVESSTNDSDDNSKVFFRSKIGEQARNLLSEEEFAKMEASLSGWEQHV
RPADMEKAVLSLLEFGQITAAKQLQQKLSPSYVPEELVLVDVALRVANDGGDGEINLLSF
DTEALSILQSLQIASGSNMIDPSQAMEKLAVKCGEGRGRALIRRIIAVLQTAKILGLPFS
EAFEKQPIELLQLLSLKAQDSFDEAKFLVETHIMPASSIARILADSFLKGLLAAHRGGYL
DSQKEEGPAPLLWRSSDFLKWAKLCPSEPEIGHALMRLVMTGHEVPHACEVELLILSHHF
YMSSSCLDGVDVLVTFAANRVDSYVSEGDFSCLARLITGVSNFHSLSFILSILIENGQLE
LLLQKYSSTDTATVAPASVRGFRLAVITSLKHFNPNDDEALSLVYKHFDMKHEAASLLES
RAEQYMESWLDRHDKERRNDELLKAMHNLVQTAEILSTIDAGQRTHRACARASLLSLQIR
IPDLVWIGLTETNARRIFVDQSRFQEALIVAEAYSINQPMEWAPVFWNQMLKPDLIELFV
AEFVLVLPLHPPMLVELARFYRAEVAARGDQSHFSVWLSPGGLPAEWGKHLGRSFRSLLR
RTRDMRLRLQLATLATGFSDVLEGCNAVLDKVPENAGPLILRKGHGGAYLPLM
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgcccatatcttatgagatggagggtgggcctactgtactgcagttatataagtggaaa
agcttgcatccctgtcttgaactatcaaaattctgtgaagcgtccatttctcctacaagg
agcctgtttggactgctctcggaacatggcgatcttgttctgtcaactgtcaatgtccaa
ccatcacaagttgaatcacctatgactctctcagatagtagcttgccagtgtttgagtgt
ttttcttctattcccagggtgaagtctttagcatggggacactgctgtgatgcttctagt
caacttgaggttccggctttcagtgaatttcttgttttatctagtgatgattctatcaca
gttcatgcgttttgtcattctgacaaaagtgcagtaacagtcaattgtgatactaaagag
ctgcatggggagtggaaagaatggtttcctaccaagtgctcagtgccggaggatggcgag
tcgggtgcaaggaactgctttcgctcttttctgactacaatcagtgcagctgtttgcaat
ggaaaataccaagccagatttcctctgaagtcttcattgcctcattctgcagaggtggta
tcatttagcatatatgatattactatgtcctttctgaaattctggttaagcagttctgct
atgaagactaggacggaaactgacagtggatctcctgaagatcttccaagtcatggacct
gtagctgaagcatcatgcagctgccagtgggaatgtttaaaagttttgcctagctcttcc
ggttatttgatcggtttagtgttaactcctaatgaatctgtaaattgcgaggtccatcaa
cacaacgccaaaaatattttggtggctatccttgagctaaaccattggggtatacagtgg
aactttgtggtagaccttcagactgcatatgatgatgtagaacctaatccacagtgggtc
gatttccaactgtcagatatatttcttgcctccatcaatgcagtgggttttgtcgccatt
tggaatgcgaaaactggtcaccttatcagctcgtttagtgttcttgatcggtgcagaata
gatctggagatgcctttgcccactgtaacaaatgtaggagaaagcacctgtgttgagaat
gtcattggcagaatgttcaagaggttagttttggcaccacattctccacttgttgctgct
gtagatgaggctggggtagtctatgtgttctatgctgacgatatcttaaatttcaaagcc
aatgctcatgaaaagtttgacgaaccttctataaatcattatggcaataattttgctgcc
tgggaaactgctggtcatgagatcgggagtcaaacattttgcagtcatcagccaattaga
caagggtcacttaatccagacaaaatggtatatgatttttcagatagatacaatgctggt
gtcgtcggagctaggaaaagaagaaaatactgtaaatgtaatgaaaatcaagtggatagc
tggccaagtggtttcagtactacatcacaaatgaaagatgtggtaacttatccttccaca
atggtgggttctgctcatgtgcgaagagtagtccttcctccatgcagatcacaggagaat
gtaataagcctctcaccatttggactgacaaggatctttagaagttgcaatgcagaggga
cataaacatgttaaaattattcacacggagttgcttatggcttcatgttcacttgacgag
agagatattgatgctggttttctggacaggagcctctcatatcagaaggatttttctttt
gctggtgaatctgctgtttgctcctttcagggatatttgtatttgatttcgcaggataac
ctttctgtggtccttccatcagtgtctgtatcgtctttttcatctcgtatcgatgccact
caattttggcaaccaggtttttctggtggtagtgcatgcaatgctctgaatttgttgtca
gtaaatagacttcgaacaagattggaggcctggcaaatagaggttttggataaagcattg
ttgtatgaaggaccttcattagcagacaggctctgctgggagaatggatgggacatgaaa
atctctaggctgcgctgggtgcaattgtcattgcattacacaaatatcaatgatctggag
caatcgttgaatatgctcgcggaggttgatcttgcagaagaaggtgttttgcaactgcta
ttggcatctgtttatcggctattatgtagcacaagaagtgatcatgaggctgcagtgtca
tccaagttaatggttttagcagtccgctttgcaacgagaacaatcaaggcttatgggcta
cttaagcaaaagaaagacatgccagccaattcagtaaagcttcatgaaatggctttcctt
ttgggagtaattagaagtatccagggccgaatcactgcaaagaaccagaattcagtccgg
atgcaaggagatgataaaaactcactgaaaataggcaaagaagtactacaaaatgattct
ccatccccagttgttgtagtggatggtgtttcaccagaactgtcagctggtttagatgct
cctgacagacaaggatcaacatctactgcatttgagtttgttcctggtagtaacaggctg
ttagcattaacgcaagttgaatcctcccttactacttctcatgacaatgacactgatcaa
agaaccactcaagttggaagaccggttactcaaggaaatatcaaggatatgatgaaccgt
tgggaaatgaataagtttgacttgaaaacaatagtcggtgaagcactacaatctggtcga
ctaccgttggcagttcttcagcttcaactgttgcgccagagggaatcatgttctggtgat
gattttgatgacgttttctccgaagttcatgaaataggaagatccattgtttatgatctg
ttaatgaagggtgaaagtcgactggctgtagctacactagaaagactaggagatgacata
gagtcggaccttagacaacttatgcaaggtactgtcagaaggtcacttaggctacaaata
gccgaggagatgaaacagcgcgggtacatgcgatcaaatgagtggaagatgttggagacc
ttagcactgattgagcgtttttacccaagcagcagcttctgggacacatatcttggcagg
gagaacgttattcatgatgctgtaaatattgttacacttccaggggaagataaaccagtg
cttgctctccatattcgcaaccaccctgctattgaatgtggtgatgttgatggagctgtg
cttggttcttgggtgaacgttaacgattacgctgatttaaaggagttctctcaaagcaac
ctttccgatggatattgggtgtgtgctgctgtgtggtctgatgcttgggatcaaagaact
gtggaccgcataatactggaccagccttgtcatatctctgctcaatcggacctcccatgg
gaatctcagtttgaatattttgttgctcatgatgatgtgggggaagtctgcaaactcttg
gacatgattcctgacagtgtacttctagaagggatacttagcattaatgtggacaattca
cgagctggttacagcattgtgtctgatgtcagtgtccctgattataaaatgtatatatgt
gactcagaggagctagagcctgtttgtatggaagtaccacatgtcaaaatattcagatcc
ttgtctaatcatgaatcaacatcatggatgagaatgctaatgcaggaacaactggcaaag
aaacacatctttatgaaagagtactggcaaagtactaccgaaattatacctttacttgct
cgagctggcatacttactaatacagccaagataggccccaagaaagaagcttctatgcca
ttaattgcttcagagatgccagatgatgaacgtcaccaggcttgtgaaagagcattgcat
aaattagtcatccgtttttgtgtgcaatatgactctccatacctactcgatctctatctg
gacaactgcaatttgattctcggggaggactctattcctttgctcaaagaagccgcaggt
gattgcaagtgggcacaatggttactcttctccagagtcaaaggttatgagtatgaggca
tccttttctaacgcccgttggaatctgtcacagaaaatggttaatcatggcaatctaact
gcaattgagatagatgagatattatatactgttgatgatatggctgaacggattggggaa
atgtctgcactagctaccttaatgtatgcttcaccaccaattcaaaagtccatatgcact
ggcagtgtgaacagaaatcgtggattgtcttctcagtgcacattagagaacctaggtcat
tgtctccagcaatttccaaccctatggaagacacttcgttccacctgttttgggcaagat
gggtatggctgtctaaattattctccaactaatgtttctggaaaatccgcaatgtcagat
tacttgtgctggcgctatagcattttttcctctgctggaggagacacttcattgttgcaa
atgctcccgtgttggtttccaaagtctattagaagattaatccaactatttgaacagggc
ccttttgggatgcaactgctatcgagtgcaccgtcatctgaggagttatttactcatggt
gtcactgactacatatacaataccactggatatagtgaaaccaatgcgttgtccttagaa
gcatccattcaaaaaagtgttgaagaactatattcttcccttgaggagaaagacttgagg
gtggagcatcatttgcaccgtggccgagcactagcagctttcaggcatcttcttggtaaa
agagcttcacaattaaaatcagcaaatgcgcgccaagtgatctccacacagtctgatgtt
caagcagatgtacaactgatcctagcccctttaagtcaaactgaacgatcagttcttcta
tcggtggctccactagctatcacaaacttcgaggactccacactggttgcttcctgcaca
ttcctgttggaactatgtggcatgtgtgctaacatgctccgtctagatattgctgctctt
cagcgcatctcttcctactataacttggctcaacaaaataaacaaagtgagctatcttca
ccaaggagctctgggttacatgtgctctcccatggggctgatattgctcctgctcttgct
cgagcattagctgaagattatgtccagtctgatcatcttcagattttagagcagaagcaa
acctctaggggtcccaaaagggaacaaccatcacagcctcttattgctatactggagcac
ctggaacgagcaagtttgccattattagacgaaggtagaacctgtggattttggctcttg
agtggcattggtgatgcatctctttaccggtcgcagcaaaatgaagccagccaacattgg
aatttggttacagaattctgtctggcgcaccatctcccattaagtacaaaatatctggct
ttactggccaatgacaatgattgggttggttttctaacagaagcccagagagctggtttt
ccaattgaagttgttatcggagtggcttccaaagagataaaggactcaagattgaggact
catatactaacagttctgaaaaacacgttatcaaatagaaggaaatcgtctagcaatgta
ccctcaggtagtagggatccatttctcttgtctgttgatggcgacgaccccatggaactt
ttctgcatacttgctgtttgtgaaaggcaaaagaaccccggggaggcacttctgaataaa
gcgaaacaaatgcagtggtctttattggcgttgattgcttcatgctttccagatgtaact
cttctctcatgcttaagcttttggcttgagattacagctgcaagggagttgtccttaatc
aaggtggactgtatttcctctaaagtagctaagaatgttggatctgctgttgaggtcaca
aataaattgccaagcgtgagtaggaatgttgaatatcgttacaacaggaagaatccaaag
cggagacggttcttggaggcctctccagatagcttcaaatcaggtttttcgctggacatc
gcaagtgggccaaatggtactgcaacttccaatccttccgatattgatgctcatcaggaa
agaagaaagcccacctctgaagagactgatattccagttgatattgatgagaggcttgca
tctttatcaagtatagtagcagtgctgtgtgaacaacagctgttcctaccgttacttcga
tcctttgacttgtttctgccatcctgctcccttctccccttcattcgttctcttcaggca
ttttgtcaaatgcgcttgtccgaggcttctgcacatttgacatcattttcagcaaggata
aaagatgaagcctctcaatcaaactcattcaaagaagcatcatcaataacaggatgggta
gttgctacagctgtaaaagccgcagatgcagtactctcaacctgtccatcactttatgag
aagaggtgtttgctacagctccttgcagcggttgattttgcagatggtggttcttcgtca
gcttacttcggccgcagttattggaaaatcaatctggctgaaccgtccttatgcaaagat
ggtgatatctacaagtggaacgattccatggatgatgcttctctcctggcagcattagag
aaggatggacgatgggaggacgctcgtacttgggcaaggcaactggagtcgagtggcata
gcttgggaatctacttttgatcatgtgacggaatcacaggcagaagctatggttgccgaa
tggaaggagtttctctgggatattccacaagaacgtgcagctttgtggggccactgtcag
tcgcttttcatgagatattctttgccacctttacaggctggattatttttccttaagcat
gctgaagcattagggaaagagataccagcacgagagcttcatgaaatacttctgctatct
ttacagtggcttactggaactattactaaatcctctccggtatatcctcttcatcttctc
cgggaaattgagactagggtttggctcctggcagtcgagtcagagactcactctaaggct
gatggcgaatcttctgttgtttctcagagtctagctattggaaacagtaccagtattata
gaacagactgctgatgtcatcacaaaaatagacagtagtatgagtttgccaagcatgaaa
gctgcagaaagaaatggtatgagggacaataacttatcaaaccatcaacatttgcatctc
tttgaatataacagtgaagcaacaacaacaacaaataatgcaagagcaaagcgaaggggc
aaaacaaatctaccacttagacgaggtgtcactgataatgttgaaagtagcaccaatgat
tctgatgataattctaaagttttctttcgttctaagattggagaacaagcaagaaattta
ctatctgaagaggaatttgcaaagatggaagcgtctctgtctggttgggagcaacatgtc
aggcctgcagatatggagaaggctgtgctctccttattagaatttgggcaaataactgca
gctaagcaactccaacaaaagttatctccatcatatgttcctgaagaacttgtccttgtt
gatgttgcgttaagagttgcaaatgacggtggtgatggagagatcaatttattatccttc
gacacagaagccctctcaatacttcaatctctccagattgcaagtggcagcaatatgatt
gatccatcacaggctatggagaaattagccgtgaaatgtggcgaggggcgcggacgggct
cttattaggagaataatagcggttttgcaaactgcaaaaatactgggactcccattttct
gaagcatttgagaaacagccaattgaacttctgcagttgctttcactgaaagctcaggat
tcttttgatgaagctaaatttctggtggagacacacattatgcctgcatctagcattgca
agaattcttgctgattcctttctgaaggggcttttagctgcacatcgtggaggttatctg
gactcccaaaaagaagaaggccctgcaccactgttgtggagatcaagtgacttcttgaag
tgggcaaaactatgcccatcagaaccagaaattggccacgctttaatgcgtttggtaatg
actgggcatgaagtaccgcatgcttgtgaggttgaactccttatactgtcacatcacttc
tacatgtcatcttcttgtcttgatggtgtggatgttctcgtcacatttgcagccaacaga
gtggattcatatgtttcagagggggatttttcttgcttagctcgcttgataactggagtg
agcaattttcactccttgagcttcatcctttccatccttatagaaaatggccaattggag
ttgctacttcaaaagtattcttccactgacacagccacagtggcacctgcatcagttcga
gggtttaggttggctgttattacatcactgaaacatttcaacccaaatgatgatgaggct
ctgtctctggtatacaagcactttgacatgaaacatgaggcggcttccctccttgagtcg
cgtgcagagcagtacatggaaagctggttagatcggcatgataaggaacgacggaatgat
gagctccttaaggctatgcataaccttgtacagactgctgagattctttcaacaattgac
gctggccaaaggacacatcgtgcttgcgctcgtgcttctctcctatctcttcagatccga
atacctgatcttgtatggattggtcttacagaaaccaacgcacgccggatttttgtggat
caatctaggttccaggaggccctcattgttgccgaagcatacagcataaatcagccaatg
gaatgggccccagtcttctggaaccagatgctgaaacctgacctcatcgagctatttgtg
gctgaatttgtactagttctgcccctgcacccaccaatgctcgtggagcttgcgagattt
taccgggcagaggttgcagccaggggcgaccagtcgcacttctcagtctggctttcacct
ggaggcttgcctgctgagtggggaaagcatctcggcagatcattcaggagtctgctgcgt
cgaacaagggatatgaggctgaggctgcagttggcaactctggcaactgggttcagcgat
gtccttgagggctgcaatgcggttctggacaaggtccctgagaacgctgggccgctgata
ctgaggaagggccatgggggtgcatacctccctctcatgtaa
DBGET
integrated database retrieval system
