Triticum aestivum (bread wheat): 123060835
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Entry
123060835 CDS
T07757
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123060835
03036 Chromosome and associated proteins [BR:
taes03036
]
123060835
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123060835
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123060835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
SH2
Tex_N
HHH_3
Iron_traffic
Motif
Other DBs
NCBI-GeneID:
123060835
NCBI-ProteinID:
XP_044339628
LinkDB
All DBs
Position
1A:504788096..504796195
Genome browser
AA seq
1631 aa
AA seq
DB search
MGRTVVSDDEEDDFIEAEEEDEPRPSRRARDDVDEQDDDEEEEDDDEDEGQNEYEKDGFI
VDDADEDEEEEEEEARASDDERRKKKKKRKKKRETEDFELDEDDYMLLQDNNITGITRPK
PPENKFKRLKKAGRESEMDGRSGFSDHDGAGKSRTAEETVRSSLFGNEEPFEEDFVEEDQ
QVDEDEVGEDDMDDEMGDFIVDEEEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDI
FGDVDELLALRKQELERDAINSGELRGNRLEDEFEPFILAEKYMTPKDEQIKETDIPERI
QLSEELTGHPIDGEANREEESVWIHNQLTGDGFLSLFSNEQVNREIDQSDIVNVLNMLHT
HKFEVPFIAMYRKESCLSLLKDNDSNEQANEEEKRKMKWHKLLWAVQTLDRKWLLLQKRK
VALQVYYERRYDDEKRRIDDVTRQALNRQLYNSISEALRDAKSEKEVEDVDAKFNLHFPP
GEVEEVGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKD
SPEDVAANFTCAMFETPQDVLRGARHMAAVEIGCEPIVKKHIRFIFMNKAVVSTKPTPEG
HLVIDPYHQLSGVKWLHEKPLNKFGDAQWLLIQKAEEEKLLKVTITLPEDAKKALMSEAR
ENYLSDCVSKSAQLWDEQRKMILDDAFLNFLLPSMEKEARSLLTAKAKSFLSMEYGKQFW
DKVSVGPWKKKDADKKDSDIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAG
SISLRSQGVAEQQRKRNDQQRVLKFMTDHSPHVVCVGASNLNCRQLKDDIYEVIFKMVED
HPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPAQSAIVKRAVALGRYLQNPLAMVA
TLCGPGKEILSWKLHPLEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQF
VAGLGPRKASALQKELVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQIID
LLEDTRIHPESYALAKNLAKDVCAEDGPEANEMDDDEQEMAIEHVREKQEQLERLDIDEY
SRSIGDDKRETLLDIKLELKCGFSDRRTPYAEPSPDEEFWLLSGETEDNISDGRIVQVTV
RHIQDNRIICTFDSGLKAIVMGDNYSDDGFDLESLQLHEGDVLTGKIKNVNKNRFIVYLT
CKSSEMKRWPLSRNNHDPYNREQNMVPTQDEKARKQKEAKKHFKPRMIVHPHFQNLTVEE
AMQFLGDKEPGEKVIRPSSRGPSFLTLTLKIFDGVFAHKEITESGKDHKDITSLLRLGKT
LTIGDETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKGEVDDMLRAEKSENPMRIVY
CFGISHEHPGTFILSYIRSTNPHHEYVGLYPKGFRFRKKDFDSIDRLVSYFQKHIDKPPP
DAGPSMRNVAAMVPMKNSAWGSGGANDGRRGDGDNDRDRPFSGRSAGGRFDSRNSSGGRG
RGRGRGRGNFGSDGDGGGGGGWTDNIGSGGGAWGTGGGSGGGDAGWGGGGDSNRGGSGDG
GWGAPAATDGGTGGWGTPAAAAAATTDGGAGGWGAATTPGAAGDDSGWGSAKKAVPAQDS
GGGWGSGGGGW
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcacggtggtttccgacgacgaagaggacgacttcatcgaggccgaggaagag
gacgagccgcggccgtcacggagggccagggatgatgtcgacgagcaggacgacgatgag
gaggaggaggacgacgatgaagatgagggacaaaatgagtacgagaaggatggcttcata
gtggatgatgcggatgaagacgaggaggaggaggaagaggaggcaagagctagtgatgat
gaaagacgcaagaagaaaaagaaaagaaagaagaagagagaaacggaggatttcgagctt
gatgaggatgactacatgttgctccaggataataacattaccggcatcactcgtccgaag
cctcctgaaaacaagtttaagcggttgaagaaggcaggacgggaatctgaaatggatggg
cgttctggcttctctgatcatgacggagcaggaaaaagccggactgctgaggagacagtt
cgtagctccttgtttggtaatgaagaaccgtttgaggaagattttgtcgaggaggatcag
caggtagatgaagatgaggttggtgaagatgatatggatgatgaaatgggcgatttcatt
gtggacgaagaggaaatcgatgtgaatggccaagttgtgaaaaggaagaaggttaaaaga
aagcctctgcgacaagctgcaggtgtatcatcatctgcgctacaagaggcccatgatata
tttggggatgttgatgagctattagcactaagaaagcaagagcttgagagggatgctatt
aattctggcgagttgagaggaaacaggcttgaagatgagtttgaaccatttattcttgca
gaaaagtatatgacaccaaaggacgagcagataaaagaaactgatatacctgagaggatc
cagctgtctgaagagttaactggccatcctatagatggcgaggcaaatagagaggaagaa
agtgtatggatacacaaccaactaacgggggatgggtttctgtccctttttagcaatgag
caagtgaacagggagattgatcagagcgacatcgtgaatgtcttgaacatgctacatacc
cacaaatttgaagttccattcattgcaatgtacaggaaggaaagttgcctgagtctgtta
aaagataatgattccaatgaacaagcaaatgaagaagaaaaacgtaaaatgaagtggcat
aagctgctttgggctgttcagaccttagacagaaagtggcttcttcttcagaagcgcaag
gttgctttgcaggtttactatgagagaagatatgatgacgagaaacgaagaatagacgat
gttacaagacaggcacttaatcgacaactctataactctatcagtgaggcactgagggat
gcaaaatcagagaaagaagtggaggatgttgacgcgaaattcaatttacatttccctcct
ggcgaagttgaagaagtaggtcaatttaagcggccaaaaaggaaatccttgtacagtatt
tgtcataaggcagggttgtgggaggttgctaaccaatttggtcggagtgctgagcaatta
ggccagcatctaactttaacgaggatacctgaagcgggtgagcttgacagtggaaaagat
tctcctgaagatgttgctgcaaatttcacatgcgcaatgtttgaaacgccacaagatgtt
cttcggggtgctagacacatggcagcagttgagatcggttgtgagcccattgtaaaaaag
catatcaggtttatcttcatgaataaagcagttgtatcaacaaagcccacacctgagggt
catttggtcatagatccttaccatcaattatcaggtgtgaagtggctgcatgagaaacca
ctaaacaagtttggagatgctcagtggcttcttattcagaaagcagaggaagaaaaactt
ctcaaggttaccataacattgccagaggatgcaaagaaagcgctcatgtctgaggctcgt
gagaattacttaagtgactgtgtcagcaagtctgcacaattgtgggatgagcaacggaag
atgatactggatgatgccttcttgaattttctacttccatcaatggagaaggaagctcga
tcactgttgacagcaaaagccaaaagttttctgtctatggaatatgggaaacagttctgg
gacaaggtttctgttggtccttggaagaagaaggatgcggacaagaaggattcggacatt
gatctggatgatgaatcagagttacgagtaatggcctgctgctggggtcctgggaagcca
gcaaccacatttgtaatgctagactcatcaggagaattggttgatgttctgtatgctggt
tctattagtcttagatctcaaggtgttgctgagcagcagcggaagaggaatgatcagcag
agggttctgaagttcatgaccgaccattcgccacatgttgtgtgtgtaggagcttcaaat
ttgaattgcagacaactcaaggatgatatttatgaggttattttcaaaatggtggaagac
cacccaagagatgtgaacccacaaatggaaaatttcagcattgtctatggtgatgaatct
gtgcctcgcttgtacgagaactctcgaatatcttcagatcagctgcctgcccagtcagct
atcgtgaagcgtgctgtggcgcttggtcggtacttgcaaaatcctttggcgatggttgca
acactctgtggacccgggaaagagatattgtcatggaaactacacccgcttgaacagttc
cttactcctgatgagaagtatgaagttgtcgagcaagtaatggtcgatgcaacaaatcag
attggttttgatgttaatcttgctgctagccatgagtggcatttttccactttgcagttt
gttgctggtctgggaccgcgcaaagcttcagctttgcagaaggagttggtaagagaggga
tccatttttagtcgcaaggagctggtgaaacccttaggcaggaaagtattcatgaatgcg
tctgggtttttacgcgtccgacgaagtggtgctgctgcagctagtgcccagatcattgat
cttcttgaggatacaaggatccatcctgaatcatatgcgttggcgaagaatttggccaag
gatgtctgtgctgaggatggacctgaagcgaatgagatggatgatgatgagcaagagatg
gcaattgagcatgtgagagagaagcaggaacagcttgaacgtcttgacatagatgaatac
agcagaagcatcggagatgataagagagaaacattgcttgacataaagttggagctaaag
tgtggtttctctgatcggaggaccccttatgccgagccaagtccagatgaggagttctgg
ttgctttctggtgaaactgaggacaacatatcagatggaaggattgttcaagtaactgtt
cggcatatacaagataaccgaataatttgcacctttgattctggattgaaagccatagtt
atgggagacaactattctgatgatggctttgatctagaatcactgcagttacatgagggc
gatgtattaactggcaaaattaagaatgtgaacaaaaataggttcatagtttacctaaca
tgcaagagcagtgaaatgaagagatggccactctcgagaaataaccatgatccatacaac
cgtgaacaaaacatggttcctacccaggatgagaaggctcggaaacagaaggaagcaaag
aaacatttcaagccccggatgatcgttcatcctcactttcagaatttgacggtggaagag
gcaatgcagttcttgggggacaaagagcctggcgagaaagtcattcggcctagttccagg
ggcccatcatttctaacgcttaccctgaagatatttgatggtgtctttgcacacaaggag
atcactgaaagtgggaaggatcataaagatattaccagtttgcttcgactcggaaaaaca
ctgaccattggtgatgaaactttcgaagatcttgatgaggtaatagacagatatgtggat
ccattggtaggccacctgaaaagcatgctctcttatcgcaaattcaggaaagggttaaaa
ggcgaagttgatgatatgttgagggctgagaaatcagagaatcctatgagaatagtctat
tgttttggcatatctcatgaacatccaggcaccttcatattatcttacatcaggagtaca
aacccgcatcatgagtatgttgggttatacccaaagggcttcagattccggaagaaagat
tttgacagcattgatcgccttgtgtcatattttcaaaaacatattgacaaaccaccacct
gatgctggcccttcaatgcgaaatgttgcggcaatggtacctatgaaaaattcagcttgg
ggttctggtggcgcgaatgacggaaggaggggagatggtgataatgatagggacagacct
ttttctggaagatcagcaggaggcaggtttgattcaaggaacagttctggcggccgtgga
cgtgggcgtggtcggggtcgaggtaactttggcagtgatggtgatggtggcggtggtgga
ggatggactgataacataggcagtgggggaggtgcgtggggcactggcggaggatctgga
ggcggggatgctggatggggtggtgggggcgacagcaaccgtggcggcagtggggatgga
ggctggggcgcacctgctgccactgacggtggcactggaggctggggtacacctgctgct
gctgctgctgccactactgacggtggcgccggaggctggggagcagccactacacctggt
gctgctggtgacgactcaggatggggcagcgccaagaaggccgtcccagctcaggactcc
ggaggtgggtgggggtctggcggtgggggctggtga
DBGET
integrated database retrieval system
