KEGG   Triticum aestivum (bread wheat): 123061264
Entry
123061264         CDS       T07757                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like isoform X1
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03013  Nucleocytoplasmic transport
taes03015  mRNA surveillance pathway
taes03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123061264
  09122 Translation
   03013 Nucleocytoplasmic transport
    123061264
   03015 mRNA surveillance pathway
    123061264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taes03019]
    123061264
   03041 Spliceosome [BR:taes03041]
    123061264
Enzymes [BR:taes01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     123061264
Messenger RNA biogenesis [BR:taes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123061264
Spliceosome [BR:taes03041]
 Complex C
  Other components
   EJC/TREX
    123061264
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123061264
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 CMS1 DNA_repr_REX1B
Other DBs
NCBI-GeneID: 123061264
NCBI-ProteinID: XP_044340214
LinkDB
Position
3A:complement(341310874..341316820)
AA seq 428 aa
MGEAKDAEVYEEDLVDYDEEVENAVDGAAANPSVDVVKKGYVGIHSSGFRDFLLKPELLR
AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV
LCHTRELAYQICNEFERFSKYLSETKVAVFYGGVHIKKHKDLLKNECPHIVVGTPGRILA
LARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQIVIFVKSVG
RASELNRLLCECNFPAICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgggagaagccaaggacgccgaggtgtacgaggaggatctcgtcgactacgatgaggag
gtggagaacgccgtcgacggcgcagccgccaacccttccgtcgacgtcgtcaagaagggt
tacgtcggaatccacagctcagggttcagggacttcctgctcaagccagagctgctccgt
gcgatccaggactgtgggtttgagcatccttccgaagtgcaacatgaatgcatccctcaa
gccattctcggaatggatgttatctgtcaagcaaaatctgggatgggcaagactgctgtt
tttgtcctctcaactctccagcagattgatccggttgctgggcaagtagctgcacttgtg
ttatgccatacacgagagttagcataccagatttgcaatgaatttgagaggtttagcaag
tacctgtcagaaacaaaagttgctgtcttctatggtggcgttcacataaaaaaacacaag
gatttgttgaagaatgaatgtcctcacattgtggttggcacacctggaaggatccttgct
ctggctagagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgt
gacaagatgcttgattcacttgacatgcgtagagatgtccaggagatcttcaagatgaca
ccccatgataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtt
tgcaagaaatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacc
cttcatggtctagttcagcactatattaaactaagtgaggcggagaagaatcggaaattg
aatgatctcttagatgcgcttgacttcaaccaaattgtgatatttgttaaaagtgttggt
agagcttcagaacttaacaggctgctctgtgaatgcaattttcctgcgatctgcatacat
tcgggaatgacacaggaggagaggctgacccggtataagaatttcaaggaagggcacaag
aggatccttgtggctacggatttggttggcagggggattgatattgagcgtgtcaatatt
gtcataaactatgacatgcctgattctgctgatacatacttgcacagggttggaagggct
gggcgttttggaaccaaagggcttgcaataacatttgttgcttctgcctctgactctgac
gtcctcaatcaggtgcaagaaaggtttgaggttgacatcaaggagctgcctgagcagatc
gacacttcaacatacatgccatcttga

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