Triticum aestivum (bread wheat): 123061359
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Entry
123061359 CDS
T07757
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taes03009
]
123061359
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123061359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CEP104-like_TOG
Cnd3
DnaB_bind
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
123061359
NCBI-ProteinID:
XP_044340373
LinkDB
All DBs
Position
3A:385555142..385572686
Genome browser
AA seq
2692 aa
AA seq
DB search
MATPSYAAVKCLNTSSSSNKRFVFKSFSERVGDIVIDVYRSIDKVKAEPSSGSSFFLDAL
MEWRELNTAEDFISFYDEMIPLVQTLPQIVLHREKIFSGLLQRVNMASRLSLEPIFMLIA
EFARDILEEFLPFLARHASAILALLSDGGDRDPEILEQVFTSWSRIMMYLQKYLVKDVVQ
ILRITSPLRFFPKDYVREFMAESVSFLLRNARNDQLTQGLMKALFEAAKKSSPIRIDGVT
ALLWHVMRGTYTKLHSRAGNVMEFLLSKSICTTIDNKFPDGSSTTREVITGVIHRLCNEV
DQKELTLIYTCLFKEIKSCIKDDCLGHLKHMIDFLTFALENSKQSDMLDKADVLELVKLL
IHKYVRPGSRTGEASSSEFLGSILDFLLCVLDVPVISCNLSIIYAPVFELTNLSAVAFLK
KLCMKGPQIIKAFESQILSTMDNILETSPKEVLFILLHLFKKATDGVTPHDIDGSHLDRE
KKVYKFCDSNVRLWIEVVDDIVKTGNHSSNLVSVKEAAILWGSVRCYSNVKDAPQDSLAM
LNKFIRSLDLLLEVQEDSISGLPKNTWRSLLGAALLSYHEILLVNVGKKSELSFFLSLAK
RHSTCPQVLSAVAEYLDSLHGATSLGMTEEFDPQNILNSFCIFGASLSSPNKNVRVLTLR
ILSYYAKMDQRLGSDDERPHKRRKAEDSAEETLEPKYTNVVDTLLAVESTPVSVSTSRKI
AIFVSRIQMSLSSNTVHDDYIPLLFHGIIGILYNRFSDLWPPALDCLAVLVSKHKDLVWS
QFIQFIAVYESKGLTVRNQEKLQAVSHPESIIDCFSLYLATDFDYTPLETIATLLLQALQ
KIPDVAESCSRHVVPLFLNFMGYTDGSITSVDSYMSDKCKGKQWKMILKEWLNLLQAMRN
ARSLSQSKIIQEILTERVLDESDPDIQAKALDCILNWKDEFLIPYSQNLKNLIGLKTLRE
ELTTWAVSHDSLSIQKCHRSHVVPLVIRVLTPKVRKLKLLGCRKHTGVSHRKAILRFLLQ
FDAKELQLFFSLLLKSLIPGSLQLEMFSCQSGNLLESISDAVGTSSSICLESLTWKRANG
FLHLVEEIFGTFGMTHIGPFLNALLIIVVRLLESCMRNLGNSSDEKDPCKQSNHPDNGCS
NDQEADNSIDLNECPNEMTVADDTEASASVKQLKDLRSLCIRIVSLALGQYESHDFGEYF
WSTFFASVKPLIDCFRQEAGSSEKPSSLFSCFMVMSQSPKLAPLLGTNNLVPAIFSILTV
RTASESITSYALEFIENLLRLDNDLEQQEDHSVKKILAQHMDVLLNSLHDFVNYRKELHR
RSGRWLGQRELRLFKLLLNYITDPSAAEHVVDLVLPFFSKKDLNSDECLEALHVVRGIIQ
NLRHGVCVKIVNALNPLLATVGLEQRLCICDIYDGLSLHESSMSSLARLLRDLNAVSTSE
LGELDYDMRIRAYDTVQPQLFHGMQEEHIGAILSHCVYDMSSDELIFRQSASRALQSFLG
FSASVMNSDPGGSVETATVKPGDNNSRNICTKGRIQQILERTYLHNMGTAMSKDISVQKE
WIILLREMVYNIDHVPSLNSFRPLCKDDLDEDFFHNIIHLQAGKRSKALSLFRQAMKDTN
FSEDVTMKVFVPLFFNMFFDVKAGKGEHVRDVCLDTLSSVAAKVQWEHYRTILMRCFREL
SLKPDKQKVILRLICAVLDVFHFMKPATDISSNSDGMIGDSHSSVTFSSTIVSLEKQQYL
RKVVFPQVHKLLGADPEKVNVSINLVALKILKLLPVDYFESQLSSIIHRICNFLKNRLES
VRDEARSALAASLKELGIGYLQFVVKILRAILKRGYELHVLGYTLHFLLSKTVTAEMNGS
LDYCLQDLLSVVESDILGDIAEQKEVEKIASKMKETKKRMSFETLKLIAQSITFRTHSSK
LILPISAHLRKHLTPKLRTKLEAMLHSIALGVECNPSTETSNLFIFVYGLVEDTIEGNES
QRKKNMESGPCQKNILRMNFLELGESGLQNSYIFTRFALSLLRNRLKSIKLHKEDEQLLS
MLDPFVNLLGKCLSSKYESVLSVTFRCLAMLVKLPLPSLKDNANSIKSVLMEIAQRTGNS
NGHLVTSCLKLLAHLLRGFRISLSDDQLQMLVRFPIFVDLQTNPSPVALSLLKAIVKRKL
VSPEIYDIVVGIGELMVTTQTESIRQQCMQILLQFFLNYPLSGKRLQQHIDFFLTNLSYE
HASGREAVLQMLHDILTRFPQRIIDDQGQTIFLHLVVALANEQHQKVSTLIVAAIKKLLG
RIGDQGKNSIFEYSLSWYTGEKQNLWSASAQVISLLVGNRSLGIGKHLENILAVGKRIME
SSCTASGGVQLDLTGETDLPFWKEAYCSILMMDNLLEHFPELYFKQNTEAIWMTICKLLI
HPHSKLRYYSSALVFKYFASVEQRKKAKLDVTSSFLVQPSRLFLIATAFLKQLRMELSDT
AENKKIVQNLAYSICNLHVLVKQTTSSHQFWSSLGSCDHGAFLEGFELLGSRKAKNTFLL
CTASCTDVDGSGLDSSEELASFFVSCLLKKMGKIAMQMEDIYMKIVFSCFSTISPKLNTE
AEFSTYAVHMLDPLYKVAEGFAGKVISDEGKQSAELTRDKLRDLIGVEKFVEIYNSVRKD
LKAKRESRKQAEKLVAAVDPARHAKRKLRMSAKHREHKKRKITAMKMGRWLR
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgtcgtacgcggccgtgaagtgcctgaacacgtcctcctccagcaacaag
cgcttcgtgttcaagagcttctcggagcgggtgggggacatagtcatcgatgtgtaccgt
agcatcgataaggttaaggcggagccctcgagcggttcctcgtttttcctcgacgctctg
atggagtggagggagctgaatactgcagaagacttcatctcgttttacgatgagatgata
ccattggtgcagacattgccacaaatcgtattgcaccgtgagaaaatattttctgggctg
ctacaacgagtaaatatggcgtcacgattgtcgctcgagccaatattcatgttaattgca
gaattcgccagggatattctagaggaatttttgccgtttctagcaagacacgctagtgct
attttggctctccttagtgatgggggtgatcgtgaccctgaaatcctggagcaggtcttc
acatcttggtcacgcataatgatgtacttgcagaagtatctagtaaaagatgttgttcag
attctcaggatcacatctccactgagatttttcccaaaggattatgtgagagaatttatg
gctgaatctgtttcatttttgctgaggaatgcacgtaatgatcaactaacacaaggttta
atgaaagctctgtttgaggctgctaaaaaatcgtcacctatacggatagacggggtgact
gcgttgttgtggcacgtaatgagaggaacttacacaaagcttcactcaagagctggaaat
gtcatggagttcttgttgagcaagtcaatatgtaccactatcgacaataaattcccagat
gggtcttctactactcgtgaggtcataactggtgttatccatagattatgcaacgaagtg
gatcagaaagagttgacgttgatatatacttgcttgtttaaagaaatcaaaagctgcatt
aaggatgactgtttggggcacttgaaacacatgattgattttcttacatttgctctagaa
aacagcaagcagagtgatatgcttgacaaggctgatgttcttgaacttgttaagttgctg
atccataagtatgttaggcctggtagcaggacaggagaagcttcttcatctgagtttctt
gggagtatcttggactttcttctttgtgttttggatgttccagttatttcttgcaactta
tccatcatatacgcccctgtatttgaactaaccaatttgagcgcggttgcctttctgaaa
aagctttgcatgaaaggcccacaaattataaaagcttttgagagtcagatactgagtaca
atggataatattcttgagacttcacccaaggaagttctctttatccttctgcatttattt
aagaaagcaacagatggagtaactcctcatgacattgatggtagtcatcttgatcgggag
aagaaagtgtacaagttctgtgattcaaatgtccgtttatggatagaggttgtagatgat
atagtcaagacaggcaatcattcgagtaatctggtcagtgtaaaggaagctgctatacta
tggggatctgttcgctgctactcaaatgttaaagacgcccctcaagatagtttagcaatg
ctgaataagtttattcgcagccttgatctgttacttgaggtgcaagaagatagcattagt
ggtcttccgaagaatacctggagaagtctacttggtgcagcattattatcgtaccatgaa
atactgctggttaacgtcggtaaaaaatcagaattaagtttcttcctatctcttgccaag
aggcacagcacatgtccgcaagtactctctgctgtagccgaatatttggattccctacat
ggagcaacttccctggggatgacggaagaattcgatccacagaatatcttgaattcattc
tgtatctttggtgctagcttgagcagtccaaataagaatgtccgggttttgacattgagg
attttatcttattatgcaaagatggatcaacgcctaggctcagatgatgagcggccacat
aagaggcgaaaagcagaagattctgcagaggaaactcttgaacctaaatacactaatgtt
gtcgatactcttctcgctgttgaatcaactccagtttcagtatctactagccgcaaaatt
gctatctttgtttctcggatacaaatgagtctatcttctaatacggttcatgatgattac
atacctcttctctttcatgggattattggcatcttatacaatcgatttagtgatctgtgg
ccaccagcactggattgccttgctgtccttgttagcaaacacaaggatcttgtctggagt
cagtttattcagtttattgcagtttatgagtcaaagggtctaaccgtgagaaaccaagag
aagctgcaagctgtgtcccacccagaatctattattgactgcttcagcttatatcttgct
acggattttgattatacaccccttgagacgattgctacactattgcttcaagccctccaa
aagatacctgatgttgctgagtcttgctctcgacatgttgttccattatttctaaacttc
atgggctataccgatggcagcatcactagtgtcgattcatatatgtctgacaagtgtaaa
ggcaaacaatggaaaatgattctaaaagaatggctgaacttgttgcaagcaatgcgcaat
gctcgatcactgtcccagagcaagattattcaggaaatattaactgaaagggtcctcgat
gagagtgatcctgatatacaggcaaaagcattggattgcattctgaactggaaggatgaa
ttcctaatcccatacagtcaaaaccttaagaatctgatcggcttgaaaactctccgtgaa
gaactcaccacgtgggcagtttcacatgactctttgtctatccagaaatgtcacagaagt
catgttgttcctttggttattcgtgtgttaacacctaaagtaagaaaactgaagctgctt
ggttgtcgaaagcacacgggggttagccatcgaaaggccattctccgtttccttctgcag
tttgatgcaaaggagcttcagctctttttctcgttactactaaagtccttgatccctggg
agccttcaacttgaaatgttctcttgtcagtctggcaacctacttgaaagtatttctgat
gccgtgggaacttcgtccagcatctgtctagagagtcttacatggaaaagggcaaatggt
tttcttcatttagttgaagagatttttggtactttcggcatgacacatataggtccattt
cttaatgctctattgatcattgttgttcggttgctggagagttgcatgcggaatcttgga
aacagcagcgatgagaaagatccttgtaaacaatcaaatcaccctgataatggttgttcc
aatgaccaggaagctgacaattccatagatctgaatgaatgcccaaacgagatgacagta
gccgacgatactgaggcaagtgcctcagtcaagcagttaaaggatcttaggtccttatgt
attcgaatcgtttccttggcacttggtcagtatgaaagtcatgactttggagaatacttc
tggagtactttttttgcttctgtgaaacctctgattgactgcttcagacaagaggctggc
agtagtgagaaaccgagctctttattttcttgcttcatggttatgagtcagagcccaaaa
ttagcaccactattagggactaataaccttgtaccggctatattttctattttgactgtg
aggactgcatcagaatctatcacctcctatgcacttgagtttattgagaatctattgagg
ctcgataatgatttggagcagcaagaagatcactcggtgaagaaaattcttgctcaacat
atggatgttcttctcaacagtctccatgattttgttaattatcgcaaagaacttcacagg
agatctgggagatggcttgggcaacgtgaacttaggttgtttaaactattgctaaattac
atcacagatccttcagctgcagagcatgttgtagatctcgtccttccgttttttagtaag
aaggatttgaactctgatgagtgtctggaagctctacatgttgtaaggggaataatacaa
aatctacggcacggtgtgtgtgtaaaaattgtaaatgcgctcaatccattgcttgcgact
gttggactcgagcagcggctatgtatctgtgatatttatgatgggctttcattgcatgag
tcttcaatgtcctctctggctcggttactgcgagatctgaatgcggtttcaacctcagaa
ctaggtgaactagattatgacatgagaatcagagcatatgatacggttcagccgcagtta
tttcacggcatgcaagaagaacatataggtgccatattatctcactgcgtgtatgatatg
tcatccgacgagctaattttccggcaaagtgcatccagggctcttcaatcattcctggga
ttctctgcatcagttatgaacagtgaccccggcggctctgttgaaacagccactgttaaa
cctggagacaacaattccagaaacatttgcacaaaaggccgtattcaacaaatattagag
agaacttaccttcataatatgggaacagcgatgtctaaagacatatcagttcaaaaggag
tggatcattttacttcgggagatggtctataatattgatcatgtaccatccttaaactcc
ttcaggcctctctgtaaagacgatctggatgaagattttttccacaacataattcattta
caggctggtaaaagatccaaagcgttatctcttttcaggcaggcaatgaaagataccaac
ttttcggaggacgtgactatgaaagtctttgttccactgtttttcaatatgttttttgat
gtcaaagctgggaagggtgaacatgtaagagatgtatgtttggatacactttcttctgtt
gctgccaaagtgcagtgggagcattacagaacaatattgatgagatgcttccgtgagttg
agtctcaagcctgataagcagaaagtcattttgaggctaatatgtgctgtgttagatgtg
tttcatttcatgaaacccgcaactgatatctcgagtaattctgatggtatgattggagat
tctcattcttccgttacattctcctcaaccatagtctctttggagaagcaacaatacctg
cgaaaggtagtatttccacaggtccataagttattaggagccgatccagagaaagtcaat
gtaagcataaacctggtagcactcaaaatactcaagttactgccggttgattattttgag
tcacaactttcaagcatcatacatcgaatctgcaattttctcaagaatcgtcttgaaagc
gtacgtgatgaagcaaggtcagctttagctgcatcgcttaaggaacttgggattggttac
ctgcagtttgtggtcaagatattgagggcgatactgaaaaggggttacgagctacatgtt
ctgggctacacccttcattttttattatcaaaaactgtgactgctgagatgaatggtagt
cttgactattgcttacaagatttgttgtctgtagttgagagtgatatacttggagatatt
gcggaacaaaaggaagttgaaaagattgcctccaaaatgaaggagacaaagaagagaatg
tcatttgagactcttaagttgattgctcagagtattacattcaggacacattcttcgaaa
ttaatcttgccaatttctgcacatcttcggaagcaccttactccaaaattaagaacgaaa
cttgaggcgatgttacacagtatagccttgggggttgagtgcaacccatcaactgaaact
tcaaacttatttatatttgtttacggccttgttgaggataccattgaagggaatgaatct
cagcgcaaaaagaatatggaatctggtccttgtcaaaaaaacattctcagaatgaatttc
ctagaacttggcgagagtgggttacaaaattcctatatatttaccaggtttgcactttct
ttgctgcgcaatcggttgaagagcatcaagctgcacaaggaagatgagcaactattgtct
atgttagatccttttgtcaaccttctgggaaaatgcctgagttccaagtatgaaagtgtc
ctttctgtcacttttagatgtcttgccatgttggtgaaacttcctttgccatctctcaag
gacaatgcaaattctatcaagagtgtactaatggagattgctcagagaactggaaattct
aatggccatttggtcacatcttgtttgaaactacttgctcatttgcttagaggatttagg
atttcactttcagatgatcaactccagatgcttgtccgtttccctatttttgttgatctc
cagacaaacccatcacctgttgccttgtcgcttctgaaagcaattgtcaaaagaaaattg
gtttcccctgagatttatgatattgtagttgggataggagaattgatggttacaactcaa
acagagtctatacgtcagcaatgtatgcaaattctgctacagttttttctaaattaccca
ctctcagggaagcgtttacaacagcatattgattttttcctgacaaacctgagttatgag
catgcatcaggaagagaagcggtgctccaaatgctccacgatattcttaccagattccct
cagaggattattgatgaccagggtcaaactatttttcttcatctggtagttgccttggca
aatgaacagcaccagaaggtgtctactttgattgtcgcagcaatcaagaagctgttaggg
cgcattggtgatcagggaaagaattctatttttgagtactctctttcctggtacactggt
gaaaaacagaatttgtggagcgcttcagcccaggttattagtctacttgttgggaatcgc
tcattaggaattggtaaacatcttgaaaatattttggctgttgggaagcgaataatggaa
tcttcttgcaccgcttctggaggagtacaactagacttaactggggaaactgatctgcca
ttttggaaagaggcttactgttctattctgatgatggataacttacttgaacactttcca
gagttgtatttcaaacaaaatacagaggcgatatggatgacaatttgcaagctgctgata
catccccattcgaagttacgctattattctagcgctctggtattcaagtattttgcttca
gtagagcagaggaaaaaagcgaagttggatgtcacctcatcgttccttgtccaaccaagc
aggctattcctaattgctactgctttcttgaaacagttgaggatggagctaagtgatact
gcagaaaataagaaaattgtacaaaatcttgcatactcaatctgtaacttgcatgtgttg
gttaagcaaacaacttcatcgcatcagttttggtctagccttggttcttgtgatcatggt
gccttccttgagggttttgaattgcttggttcaagaaaagcaaagaacacatttctcctc
tgcactgcctcttgcactgacgtagatggatctggccttgacagcagtgaagaacttgca
tctttctttgtttcttgtctcctgaagaaaatgggaaaaattgcaatgcagatggaagac
atatatatgaagatcgtgttcagttgtttcagtacgatttcaccaaaactaaacactgaa
gctgaattttcaacctatgctgttcacatgttggacccattgtacaaagttgctgaagga
tttgctgggaaagtcatcagtgatgaaggtaagcagtcagcagagttgaccagggacaaa
ctacgtgatctcattggtgttgagaaatttgtggaaatttacaacagtgtccggaaggac
ctgaaagcaaagagggagagcagaaagcaggctgagaagcttgttgcagccgtcgaccca
gcgcggcacgccaagaggaagttgcgtatgtctgccaagcaccgagaacacaagaagcgg
aagataacggcgatgaagatgggaaggtggttgaggtag
DBGET
integrated database retrieval system
