Triticum aestivum (bread wheat): 123061480
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Entry
123061480 CDS
T07757
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123061480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123061480
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123061480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123061480
NCBI-ProteinID:
XP_044340538
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All DBs
Position
3A:420300119..420305052
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AA seq
1056 aa
AA seq
DB search
MPDPEDKDGAEDAHEEEDKEEEEEDKEEDEWEQEEEEESEESEEDSEEPEAEEEPGRRVL
SDARLAGRYTGPRPGGEIFLKRKFEGWYITKMADTASPGGTVASRLRSKRRCPDAKLLRQ
ATRRKPYCVDTPSQSSSEAEEDDKDKPPPHPARSSSDEGGRGHGRTGIRRPRRRGQNADD
DSDEDGRSATRRRRGQNAAHTDEDFEEPGGMAAARREKQRMEEDDAAADGGDEADEQGAS
RRAKKEGAASCRQAAGRKGKDFPAEGWEQQGDVTFKKSSLVPPRRQDGRDQETYDDLLYS
IFEGIETTLQNASAPLDAPVPAPEQGGDPFPLVFSFGVVDKVVPEKTALDDLWAQRDLAL
DLEAESNKVSSHTCHKDAESDEHEIPAHGGTFCKRGKHDLFHDDQIGIRCRKCDYIEIEI
RHVFPSMAKESTDREPAAEHDRLDMFVDDILKSVGYEGASNVALGSDKTGVVWDLIPGVR
EDMFPHQREGFEFMWRKLAGGIDIEQLRHTMNTDTTSGCVISHAPGTGKTRLAITFVQSY
LELFPHCRPVIIAPRGMLATWEQEFSKWNVKLPFHVLSSSEIQWDQDKTIQKLVSKDHGL
GQKLAMKKLSQKSKMMLKLASWYEGSSIIGLSYSLYRNLAKGEGKDGEMQRNLLLEKPGL
LVLDEGHTPRNKKSLIWKVLAEVSTEKRIILSGTPFQNNFLELYNILCLVKPKFAKDFAC
TRLSKKGVASTSQSRAAPYVEEDEGKEFWSSLRISNITDEHITEIREKLGPFVHIHNGDI
LQKSLPGLRESVVILNPLPRQKEIIAMMEESAGKGFLDAEYKISLASIHPFLVTSTKLSD
TEASVVDKMKSVRLNPCKGVKTWFVFEIIRLCEALKERVLVFSQYLEPLALIMDQLTTEL
DWTEGKEILLMSGNVRVKQREALMEAFNDMNSEAKVMLASTKACCEGITLVGASRVVLLD
VVWNPSVGRQAIGRAYRIGQEKIVYTYNLIAEGTKEKVKYDRQATKDHMSKLLFSNEPQP
TGSNLSPELISNDRILEKMAAREELKDMFVQILPSH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgccggatccagaggataaggacggtgcagaggacgcgcatgaggaagaagataaagag
gaggaagaggaagataaagaggaagatgaatgggagcaggaagaagaggaagaatcggag
gaatcggaagaagattccgaggaacctgaggcagaggaagaaccgggccgtcgcgtgctt
agcgatgccaggctcgccggtcggtacacggggccgcggccgggcggcgagatcttcctc
aagcgcaagtttgaagggtggtacatcaccaagatggcggacaccgcctctcccggcggc
accgtcgcgtcgcggctgcggtcaaagcggagatgccccgacgcgaagctgctccggcaa
gccacccgcagaaagccgtactgcgtcgacacgccctcgcagtccagctcggaggcagag
gaggacgacaaagacaaaccaccgcctcatccagcgcggtcgtccagtgacgagggcggg
cgcggacatggcaggacggggataaggcgcccacggcgccgaggacaaaacgccgatgat
gactctgacgaagacggcagatcggcgacgaggcggcgccgaggacaaaacgctgcccac
accgatgaagactttgaggaacccggcggaatggctgccgcgagaagggagaagcagcgc
atggaagaagatgatgctgctgctgacggcggcgatgaggctgatgagcagggagcttcc
cggagggcaaagaaagaaggagcggcgtcctgccggcaggcggccggccgcaagggcaag
gacttccccgcagagggatgggagcagcagggcgatgtcaccttcaagaagagctccctg
gttcctccgaggcggcaggacgggcgagaccaagagacttacgacgatctgctctactcc
attttcgagggaatcgagaccactcttcagaacgcctctgctcctctggacgcccctgtt
cctgcaccagagcagggaggcgatccgtttcctctggtgttctccttcggggttgtagat
aaggtggtgccggagaagactgctctggacgacctgtgggcacaacgtgacttggccttg
gacttggaggccgaatccaacaaggtttcttctcacacttgccacaaggacgcagagagc
gatgagcatgaaattcctgcacatggagggactttttgcaagcgagggaagcatgatctc
tttcatgatgatcaaatcggcattcgatgccgaaaatgtgattacatcgaaatcgaaatt
agacacgtatttccatccatggccaaggaatcgacggatagggagccagcagcggagcat
gataggcttgacatgttcgttgatgacatcctgaaatcagttggttatgaaggggcaagc
aacgtggcactgggaagtgacaaaactggcgtcgtctgggatctcattcctggggtacgg
gaagacatgttcccacaccagcgggaagggttcgagttcatgtggagaaaactcgcagga
gggatcgacattgagcagctgaggcacaccatgaacactgacaccacaagtggttgtgtg
atctctcatgccccgggtaccggcaagaccaggctagcaatcacattcgtgcagtcttac
ctggagctcttcccgcactgcaggccagttatcattgcccccaggggtatgctggctaca
tgggagcaggagttcagtaaatggaatgtcaagctcccattccatgtcctcagttccagt
gagatccagtgggatcaagacaagaccatccagaaactggtctccaaggatcatggtctg
ggccagaagctggccatgaagaaactgagccagaaatccaagatgatgctgaagcttgca
tcatggtatgaagggagcagcatcatcggtctaagctattcgctctacaggaatcttgcc
aagggcgaaggcaaggatggagaaatgcagaggaacctgcttcttgagaagcccggcttg
ctggtcctcgacgaggggcacacaccaaggaacaagaagagcctcatttggaaagttctc
gcagaggtcagcaccgaaaagcggataatcctgtcagggactccattccagaacaacttc
ctagagctgtacaacatcttgtgcctggttaagcccaagtttgccaaagattttgcttgt
acaagactcagcaagaaaggagttgcttccaccagccaatcaagagcagcgccttatgtg
gaggaggatgaaggcaaagaattctggagttcattaaggataagtaacatcacggatgaa
cacatcactgaaatccgggaaaagctgggcccttttgtgcacatccataatggtgacatt
cttcagaagtctcttccaggattgagagaatctgttgtgatcctgaaccctcttcctcgt
cagaaggaaatcatcgcaatgatggaggaaagtgcagggaagggttttcttgacgcagaa
tacaagatatctcttgcgtccatacacccattcctcgtcacaagcacaaagctgtcagac
acagaagcctctgttgtggacaagatgaagagcgtgcggctgaacccatgcaaaggagtg
aagacatggttcgttttcgagatcatccgtctctgcgaagcactgaaagaaagagtgctg
gtgttcagtcagtaccttgagccactggccctgatcatggaccagcttaccacagagcta
gactggacagaaggcaaggagatcctactcatgagtggaaatgtgcgtgttaaacagcgc
gaagccttgatggaagccttcaacgacatgaacagtgaggctaaggtgatgcttgcatca
accaaggcctgctgtgaaggaataacactggtcggtgcatcgcgtgtggttctccttgat
gtcgtctggaatccttctgttggacggcaggcgattggccgagcctatagaatcggccag
gagaagattgtgtacacatacaacctgattgcagaaggaacaaaggagaaggtcaaatat
gacagacaagctaccaaggatcacatgtccaaattactgttttcaaatgaaccgcaacct
actgggagcaatctgtcaccggaactgatatccaatgataggattttggaaaaaatggct
gcacgtgaagaactcaaagacatgtttgtgcagattctcccttcccattga
DBGET
integrated database retrieval system
