Triticum aestivum (bread wheat): 123062223
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Entry
123062223 CDS
T07757
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123062223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taes03009
]
123062223
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
Pre-60S particles
RNases
123062223
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
123062223
NCBI-ProteinID:
XP_044341585
LinkDB
All DBs
Position
3A:560837153..560842920
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AA seq
606 aa
AA seq
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MPPAPTHHGLSRARPPSPFPFFLVGTSRSCRLHPVRRRAPGRTSRFAPAAAPDMSTPSGP
GEADGATPAASTYYDVFGPDAKPDVIFKEATSDSTLNLQDVQGLVTWVIGEGMPPSWVFV
KNKPLIPKVILLYVPGLDAALYMSQSRLLSSLKELCGNPKPVLASSCVPDERHTIDALLT
CRVKRKRQSQTSNQPSESDGGKLSSLADLKDIPFPVKYYTLSKKDLEDNGYSLNLPGFVP
TIAAPSGSSPYEILALDCEMCVTAAGFELTRVTLVDIKGEVILDKLVKPTNPITDYNTRF
SGITAEMLSDVTTTLQEIQEEFIGLVYKETILVGHSLENDLLALRISHDLVIDTAVLYKY
NRGTRCKIALRVLANKYLSRVIQNTGSGHDSVEDARAALDLAFLKIKYGPDFGSPPSFSR
RKLSSILHECGKRSSLIDEVFVLDRYSDASCNSIAVFSDDDALSRSMKEVKNDKISFVWT
QFSGLISYLRKRAENPEKLKSCVAEAIALKTCDRKTARKRAKQICPELKAILSELDKKIK
KLYDTLPENAMFILCTGHGDTPLVQRLKKMLNHGEETVDSRENIVHALEDLQAQAEVALC
FCCVKH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgcccccacccaccacggcctctcacgcgcgcggccgccatcgccgttcccg
ttcttcctcgtcgggacatcgcgttcctgccgtctccaccccgtccgcaggcgcgcgccc
ggcagaacttctagattcgcccccgcggcggcgcccgacatgtcgaccccctccggcccc
ggggaagccgacggagccacgcccgctgcctctacgtattacgacgtcttcggccccgac
gctaaacctgatgttatttttaaggaggccacttcagattccacattgaatctgcaggat
gtccaggggctagtaacttgggttattggtgaaggcatgccgccttcatgggtgtttgtt
aaaaacaagcctcttatcccaaaagttatccttctctatgttcctggcctcgatgcagct
ttatacatgtctcagtcccgcctcctgtcttctttgaaagaattgtgtggcaatccaaaa
cctgttctagcttcaagttgtgtaccagatgaaaggcataccattgacgcactcctgaca
tgcagagtaaagcgaaagcggcagtcacaaacatcaaaccaaccatctgaatctgatgga
ggtaaattatcaagtctggcggacctaaaagatataccatttcctgttaaatattacaca
ctttctaaaaaggatttggaagataatggctactctctcaatttaccaggttttgtccct
acgattgcagctccttcaggctcttccccatatgaaattctcgctcttgattgtgagatg
tgtgtgacagcagctggatttgaacttacaagagtgacattagtcgatattaaaggagag
gtgatactggataaactagtcaagcctaccaatccaatcactgattacaatacaaggttt
agtggaatcactgctgagatgctatccgatgtgacaacaaccctccaggagattcaggaa
gagtttattggacttgtgtacaaagaaaccattcttgttgggcattctttggaaaatgac
cttttggcattacggatatctcatgacttggtcatcgacactgctgttttgtacaaatat
aatcgtggcacccgctgcaaaattgctttacgtgtcctggcaaacaaatatcttagccgg
gtgatccagaacacagggtctgggcatgacagcgtggaagatgcaagagctgctctggat
cttgcctttttgaaaatcaaatatggtcctgattttggctctccaccgtcgttttcacga
agaaagttgtcttccattctgcatgaatgtgggaaaaggagttccctcattgatgaagtg
tttgttcttgaccgctattcagatgcttcctgcaattcaattgcagttttctcagatgat
gatgccctctccagatcaatgaaagaggtaaagaatgacaaaatcagctttgtctggact
cagttttcaggattgatctcttatctacgtaaaagagctgaaaatcctgaaaaactgaaa
tcctgtgttgcggaggctattgcattgaaaacctgtgacagaaaaactgcccggaaaaga
gcaaagcaaatttgtccagagctgaaggcaattttgagtgaattggacaagaaaataaaa
aaactatatgatacactgcctgaaaatgcaatgtttattttatgtaccggtcatggggat
actcctttggtccaaagattaaagaaaatgctcaaccatggagaagaaacagtcgatagc
cgggaaaatattgtccatgcattggaagatttacaggctcaagcagaagttgctctatgc
ttctgctgtgtcaagcattag
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