Triticum aestivum (bread wheat): 123062641
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Entry
123062641 CDS
T07757
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123062641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123062641
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123062641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
Spectrin_SESTD1
NAP
SGT1
Motif
Other DBs
NCBI-GeneID:
123062641
NCBI-ProteinID:
XP_044342176
LinkDB
All DBs
Position
3A:620517929..620525337
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AA seq
709 aa
AA seq
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MATSFAFGNSGGAGSTSSSPFSFSTAPSAFSSSPAPAFGSSPAPAFGSSPFSATTASSAP
AFGSSLFGSTPASAPATATASSPSPFGFGATGFGFSQPAATSSASPLFGAPATSAAATTP
SIFGAATTTPSPFGAPATSSAATTPSLFGAVSSPAATPGLFGATTAAASTPSIFGASSAA
STPGLFSGAATGFGFGSSASGSAAASAPSFGFGAPAASSTATTSASAPSLFGPATGSSLF
GSTSTAPLFSNAAASSPATTATTAPSLGFSLAPATTASAPSFGFTPSSGSTTAASTTPSL
FSSAPSASAFSFSNTASAAPTTPASAPASGFSLATSQAASAPSLFSNTGAAARSSASSLS
SPFGASFATPTPTFASASAASASTAPSATSGSSLFSASGFSFTVPPASSAAAVTTTATTI
TTSAATTPSTTTSAFPSFSLQAPTPAPASTPATQSTLLGGSTTAASTLATIATTSQATSS
AVQASSTGASTSAITPAAPQAAKLPSEIVGKCVEEIIRDWNNGLQDRTAKFRKHATAISE
WDRRILQNRNVLIRLEADVAKVVETQTSLERQLELIETHQKEVDKALQSMEEEAERIFQD
ERVLLREDEAASARDIMYEQGEVVENELQHMTEQVKSIIQTMNSTQGGELEATDNMAPFD
VAVRILDNQLRSLMWIDEKANEFSNRIQRLPNNSTAAERDSGIPRFWLS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttcgcgttcggcaattccggcggggcgggatccacctcgtcctccccc
ttctccttctccaccgccccatccgccttctcctcctcccccgcccccgcgttcggctcg
tcccccgccccggcattcggctcttcccctttctccgcgaccaccgcttcatctgctccg
gcttttggttcgtccctcttcggatccacccccgcctccgctccggccaccgccaccgct
tcctccccgtccccctttggcttcggggccactggtttcgggttctctcagcccgcggcc
acctcgtccgcctctcccctcttcggcgcacccgccacctccgccgcagcaaccacgcct
agcatattcggggccgccacgaccacgcccagccccttcggcgcaccggccacctcgtct
gcggccaccaccccgagcctcttcggcgccgtctcctcccccgcggccacaccaggtctc
ttcggtgcgaccaccgccgccgccagcacccccagtattttcggcgcttcttccgctgcg
tccactccaggtcttttctctggcgccgccacgggcttcggcttcggctcatcggcatca
ggctccgccgccgcctcggcaccatcattcggcttcggcgcgcccgccgcatctagcacc
gccactacctcggcttccgcaccgtctctgtttgggcccgccactggttcgtccttgttt
ggatccacctccaccgcgccgctgttcagcaacgccgcggcatcgtctccagcaaccact
gccacgaccgcgccatcccttggcttttcattagcgccagcaactactgcctctgctccg
tcgtttggtttcacgccgtcatcaggaagcacgacggcggccagcaccaccccttccttg
ttctcgagtgctccctcagcctctgccttctcgttctcaaacactgcatccgctgctccc
accacgcctgcctctgcgcccgccagtggtttctccttggccacttcgcaggctgcatct
gctccctcattgttctctaatactggtgcagctgcaaggtcttcagcgagctctcttagc
tccccgtttggtgcatcttttgctactcccacgccaacatttgcttctgcttccgcagcg
agtgcatcgactgcaccatcagcaacctcggggtcatcactgttctccgctagcggtttc
agctttacagtaccgccggcgtcatcagcagcagcagttacaaccactgccaccactatc
actacttctgcagccacgactccttctaccacaacatctgcatttcctagttttagcttg
caagcgcccacaccagctcctgcctcaactccggcaactcagtctacactgcttggtggt
tctacgacagccgcaagcacactagccaccatcgccaccacaagtcaggcgacttcctca
gctgttcaagctagtagcactggagctagtacgagtgccatcactccagcagcacctcaa
gcagctaagcttccgtcagaaattgttggtaaatgtgtcgaggagattattagggactgg
aacaatgggcttcaagatcgcacagcaaagttccggaagcatgccactgccatatctgaa
tgggacaggagaattctgcaaaacaggaatgttcttataaggcttgaggctgatgtggcc
aaagttgttgaaacacaaacaagcttggagaggcaacttgagttaatagaaactcatcag
aaagaggtggacaaggctctgcagagcatggaggaggaagccgaacgtatattccaggat
gaacgggtcttacttcgtgaagatgaggctgcctcggcaagggatataatgtacgagcaa
ggtgaagttgtggagaatgagttgcagcatatgacagaacaagtaaaatccatcattcag
accatgaactctactcagggtggtgagcttgaggctacagataacatggcaccatttgat
gtcgctgtccggatactggataatcagctgcgctctctaatgtggattgacgagaaggca
aacgagttctcaaacagaatacagagactgcccaacaatagtactgcggctgagcgcgac
tcaggaatcccaaggttttggttaagctga
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