Triticum aestivum (bread wheat): 123062660
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Entry
123062660 CDS
T07757
Name
(RefSeq) WD repeat-containing protein ATCSA-1-like isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03420
Nucleotide excision repair
taes04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123062660
09124 Replication and repair
03420 Nucleotide excision repair
123062660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
taes04121
]
123062660
03400 DNA repair and recombination proteins [BR:
taes03400
]
123062660
Ubiquitin system [BR:
taes04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123062660
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
123062660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_VPS8
WDR54
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
123062660
NCBI-ProteinID:
XP_044342207
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Position
3A:621621083..621624183
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AA seq
453 aa
AA seq
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MWWEEVRRRERGELRPRRFEALARSRRAASLALSNRKEIATPHLGAVNSLQVDLTEGRYL
LSGASDGSAAVFDLKDATEYEAGFIAKHRSILLVDRQHQHGHKFTVSKAIWYPVDTGLFV
TASFDNYVKVWDTNSSQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIASG
AFTHTLSGHLDGIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLVLDQLRSQLGRRP
PIIDSTTDNQHQKNLGRSSSSKSYSVQQRTGNHKKQSKALRKSLTMVRGHTQQKVHPGMS
SSQNHKTAHYGAVTGLRTTTDGMHLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTSKPL
QLAVTDDPSLVFIPCMSSIKAYNTWSGTTFQTFRGHYDHVNCCYYNSQDQELYTGSNDRQ
ILVWSPSTPALTEMEDDDKRQEGFAADEDNWSD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgggaggaggtgaggaggagggaacgcggggagctgcgcccgcggcgcttcgag
gccctcgcccgctcgcgccgcgctgcctcgctcgcgctctccaaccgcaaggagatcgcg
accccgcacctcggcgccgtcaactccctccaggttgatttgacagaggggaggtacctg
ctctcgggggcgtcggacggatcggccgccgtcttcgatctcaaggacgcgacggagtac
gaggccgggttcatagccaagcacaggagcattctgctcgtggacaggcagcatcagcat
ggccacaagttcaccgtctccaaggccatctggtatcctgtggacaccgggctgttcgtc
acggcctccttcgataactatgtcaaagtgtgggataccaattccagtcaagtggtcatg
gattttaagatgcccggaaaagtgtacagtgctgcaatgtccccaattgcaacaacgcat
atgctcatcgcaaccggaagcgcagacgttcaggtccgtttgtgtgatattgcttccgga
gcctttactcacacgttgtccggtcatcttgatggtatcatgtctttggagtggtctacc
tcaagcgagtggatcctaatgagtggtggctgcgacggggcgatacgtttttgggacata
agacgagctggatgcttccttgtccttgatcagttacggtctcagctaggaagacggcct
cccattattgatagcaccacggacaaccagcatcagaagaacttaggacgttcatcttca
tcaaagagttactcagttcagcagaggacaggcaatcataagaagcagtccaaagcacta
cgcaaaagtctaaccatggtacgtggacatacgcaacagaaagtgcatcccggtatgtca
tccagtcaaaatcataaaacagctcattatggtgctgttacaggattaagaacaacaaca
gatgggatgcaccttcttagctcaggatctgattctcgtttaagactctgggatatcgat
tcaggctgcaatactttggtcaattttgaagccatgcgattgcaaactagcaagccacta
caattagctgtcactgatgatccatcacttgttttcattccatgcatgtcaagcatcaag
gcatacaatacatggtctggtacgacatttcaaacattccgtgggcattatgaccatgta
aattgctgctactataactcacaagaccaagaactctatactggtagcaatgatcgacaa
attcttgtgtggtctccatcgactcctgctttgactgaaatggaagacgatgacaagcgg
caagagggttttgcagctgatgaggataactggagtgactaa
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