Triticum aestivum (bread wheat): 123062754
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Entry
123062754 CDS
T07757
Name
(RefSeq) 5'-3' exoribonuclease 3-like
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03008
Ribosome biogenesis in eukaryotes
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123062754
09123 Folding, sorting and degradation
03018 RNA degradation
123062754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123062754
03019 Messenger RNA biogenesis [BR:
taes03019
]
123062754
03009 Ribosome biogenesis [BR:
taes03009
]
123062754
03016 Transfer RNA biogenesis [BR:
taes03016
]
123062754
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123062754
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
123062754
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
Pre-60S particles
RNases
123062754
Transfer RNA biogenesis [BR:
taes03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
123062754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
123062754
NCBI-ProteinID:
XP_044342341
LinkDB
All DBs
Position
3A:complement(632894659..632903546)
Genome browser
AA seq
1054 aa
AA seq
DB search
MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVQVPVDTSKPNPNGLEFDNLYLDMNGIIH
PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR
AAKDAADAAEEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYIHR
RLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGNRNLDGFNPNTRHCLYGLDADLIMLA
LATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDEIVPKKP
YQFLNIWTLREYLEYEFRMPNPAFETDIERIIDDFIFMCFFVGNDFLPHMPTLEIREGAI
NLLMAVYKKEFPNMGGYLTDACTPDLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKR
DKAQAKRGDDLDPHVRGDLIVPVARFQGSRLASGAVASPYEHNGRSTEKGSQAKKTRVSS
SDSSLSAAVVEAEISVEAQARENKEDLKSMLKVALRDKSDLFNSENPEEDKIKLGEPGWR
ERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDL
KGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQYRQLMTDPSSPIIDFYPIDFEVD
MNGKRFSWQGIAKLPFIDEARLLSEIKKVEHTLTPEEARRNSTMYNMLFVNGAHPISPYI
YSLSSKFGHLPDNERNEIKEELNPEASGGMNGYISLCGGDPSPPVFRSPVDGLEDIMDNQ
VICSIYKLPDPHKHIARPPPGVIIPKKIVEAGDLKPPPVLWHEDNGRRPYDNNRKHCDNS
SRQNPAGSIQGRQLGEAAHRLVANSLNVRGGGQYPPARPYQTIMNGMQHYPNGMPPRMEQ
PAGRSGWHVPSDNLPNGQAPAYVQPSGHQYTRDNRGRQQPYARDSHSDSRGAGRHPSGYH
QNSSNAYSSHTAPPSSGFGRYGQPPSYAGGYAAGVYQPAPYAGAQQWQQQPPHSSYSGGG
APAARPNSRPQQSQNRYSNLDRTSNRRPPGQGRY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcccggcgttctaccgctggctcgcggagaagtacccgatggtggtggtggac
gtggtggaggaggagcccgtggagatcgagggcgtccaggtccccgtcgacacctccaag
cccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacgggattattcac
ccctgcttccaccccgaggacaggccctcgccgacaacattcgctgaggttttccagtgc
atgtttgattacatagataggctctttatcatggttcgccctcggaagcttatgtacatg
gccattgatggtgtggctcctcgtgctaagatgaaccagcagcgctctagacgattcaga
gctgcaaaagatgctgctgatgcggctgaagaggaagaaaaactgcgtgaagagtttgag
agggaaggaagaaagcttcctccaaaactgcaatcacaaacatgtgattctaatgttatt
actcccggcacagagtttatggctgttctatcagttgctttgcagtactacatccaccgc
agattgaattatgatcctggatggaaacaaattaaagttattctttctgatgccaatgtt
cctggtgaaggggaacataaaatcatgtcctatattcgtggcaataggaaccttgatgga
tttaacccaaatacccgacattgcctgtacggcctggatgcagatctaatcatgttagct
ctagcaacacacgaagtgcacttctccatactgagagaggtggttttcacacctggacag
caggacaaatgcttcttgtgtggtcaagttggacatctagcagcaaagtgtgaaggaaag
gcaaaacggaaagctggggagtttgatgagaagggtgatgaaatagtaccaaagaaacct
taccagttcttgaatatatggaccctgcgagagtacctagaatacgagttccgaatgcca
aatccagctttcgagactgatattgaacgcatcattgatgatttcatcttcatgtgcttt
tttgttggcaatgattttcttccacacatgccgacactagagattcgtgagggagctatt
aatttgttaatggctgtatacaagaaggaatttcctaatatgggtggctatttaactgac
gcttgcacgcctgatctgaatagagtcgaacacttcattcaagcagttggttcatacgag
gataaaatatttcagaaaagagctcgtttgcaccagcgtcaagctgaaagaataaaacgt
gataaagcccaagcaaagcgaggtgatgatctggatccccatgtaaggggtgatcttatt
gtacctgttgcacgtttccaaggatctcgccttgcctctggggctgtggcttcaccatat
gaacataatggacgtagtacggaaaagggcagtcaagctaagaaaacacgtgtatcatct
tcagattccagcctttctgctgctgttgttgaagctgaaattagcgttgaagcacaggca
cgtgaaaacaaagaagacctgaagtcaatgcttaaagttgcacttcgtgataaatcagat
ctttttaattctgaaaatcccgaggaggacaagataaagcttggagaaccaggatggaga
gaaaggtattatgaagacaagtttggggcaagaacacctgagcaaattgaagaaatacgt
agagatgttgttctcaaatatactgaaggtttgtgttgggtaatgcactactattatgaa
ggtgtctgctcatggcaatggttttacccttatcactatgccccttttgcttcggattta
aaaggtttaggccagcttaatataacttttgaacttgggtcaccattcaaacctttcgat
cagcttatgggagttttcccagcggcgagctcacatgcactccctgtacagtatcggcaa
ttgatgaccgatcctagttcgccaataattgacttttatccgattgattttgaagtagat
atgaatggaaagaggttttcttggcaggggatagctaagctgcccttcattgatgaagct
aggttgctgtctgagattaaaaaagtcgagcatactttgacgcctgaagaagcaaggcga
aacagtacaatgtacaatatgctttttgtgaatggcgcacacccaatttcgccttatatc
tactctctcagcagcaaattcggacatctgcctgataacgagcgaaatgaaattaaagag
gaactcaatcccgaagctagtggaggaatgaatggttacatctcactttgtggtggggat
ccaagtccgcctgtctttagatctcctgtggatggactggaggatattatggacaatcaa
gtgatatgctcaatttacaagcttccagaccctcataagcacatagcacgtccacctcct
ggtgttatcatacccaagaagattgttgaagctggtgacctgaaaccaccgcctgtgctg
tggcatgaagacaatggcaggaggccttatgacaataacaggaagcattgtgataacagc
agcaggcaaaaccctgcaggatcgatacagggccgccaactaggggaggctgcacaccga
ctagttgcaaacagcttgaatgttcgcggtggcggacaataccccccggctaggccatat
caaactataatgaatggtatgcagcattatccaaacggaatgccaccaaggatggagcag
cctgctggacgttctggttggcatgttcctagtgataatctacccaatggtcaggcacca
gcctatgtgcagccatcaggtcatcagtatacaagagataatcgcggaaggcaacaacca
tatgcgagagacagccacagtgattcaagaggagcaggccggcatccatctggataccat
cagaatagtagcaacgcatattcatcacatactgctcctccgtcatcgggttttggacga
tatgggcaacccccctcgtatgctgggggctatgctgctggggtctaccagcctgcacca
tatgcaggagcccaacagtggcagcagcaaccacctcatagttcctattctggaggtggg
gcgcctgctgctagacctaattcacgaccgcagcagtcacagaaccgctacagcaactta
gataggacttcaaacaggagaccaccaggtcagggccgctactag
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integrated database retrieval system
