Triticum aestivum (bread wheat): 123062998
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Entry
123062998 CDS
T07757
Name
(RefSeq) endoribonuclease Dicer homolog 3a-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123062998
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123062998
microRNA pathway
RISC loading complex
123062998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
PAZ
dsrm
SWI2_SNF2
DND1_DSRM
DSRM_2
SLFN-g3_helicase
PCDO_beta_N
Motif
Other DBs
NCBI-GeneID:
123062998
NCBI-ProteinID:
XP_044342634
LinkDB
All DBs
Position
3A:complement(658929307..658939466)
Genome browser
AA seq
1678 aa
AA seq
DB search
MAEAEPESAPGGGEAGEDAMDATGPAAAPAEAEAAAPVPDVNMNPLKRPSESCAQGDEAD
GQKRQKTESQVFTPRRYQLDVFEVAKARNTIAMLDTGAGKTMIAVMLMKEFGKKIDKSNN
NGKIVFLAPTVQLVTQQCEVIKTHTDFEVELYCGASGVDHWTPQRWKEKISKSQVMMMIP
DVLLSALGKAFLSLDMVSLMIFDECHRATGKHPYSRIMKDYYHQSDHKPKVFGMTASPVI
RKGVSSNLDCEVQFTELEKLLNAKIYTVADRAEIELCAPSAKEVDRYYDPKTVCFKDLSE
ELGLLHSEYDALITTLQNKPNCQNKESDEIAKESRRRLSNSSAKILYCIDDIGLLCASEA
TKIYIERGQRKGWLKKASDATNIQSVANSSFLLAEISVLHLKFFEDMSCIIDKHLQQGSD
VLLNSESGCVEAIKTGYISPKLYELIQIFHSFSNCDHVRCLIFVDRKITARAMERTMKKI
GHLSHFTFSSLTGGSSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIDVTDCSCVI
RFDLPKTTRSYMQSRGRARQKDSQYILMIERENVKQNNLISAILRSEKSMVETALNRDSE
DLLPGFFPVEEKNEYLVGTTGAKVTAGSSVSVIVQYCDKLPGDKYDTTKPLFEFTNHGDG
FVCTLTLPSSDMLPPLVGPKARNKKKAKQLVCLDACKQLHQLGVLTDSLCLSVEEPPLES
VNKTDVLTSLAGVGTTKRKELHGTTRVCGLSGTWASERTAVKLQGYRMKFLCDQVGQKYS
DFVLLIDKTIAHEAANLDIDLFLHDKMVKASVSPCGLFELDVQQMEQAKLFQALLFNGLF
GKLFTGSKSSDVPREFILNKDDTFIWNNPNMYLILPMDPTVESHDITCINWRVIDEAATA
VKLLRKIYSEEKMNIQGILDFDQNDEDLIHFANTSCETHFLRNVVVLAVHTGKIYTALHV
ADLSANSTFDGVSDEKGTEFRTFAEYFEKKYGIVLRHPSQPLLVLKPSHRPHNILSSKLR
DEGNGEKKKGGTSDITKANNRVHMPPELLIPLNFSDDILRTFYLFPSLMHRIEALMLASQ
LKSEISYDDSNVSSFLILEAITTLRCSEDFSMERLELLGDSVLKYVVSCHLFLKFPNMDE
GQLTSSRVDIISNAALYGFGIEHKIQGYIRDAAFDPRRWLAPGQLSIHPVPCNCQVNSEV
VTEDINVKVGQLCDKGHRWMCSKTISDCVEAIIGAYYVEGGLRAAMAVLKWLGINVEVEE
ELIGQFLSASVQTYLPKNDVIEKVEAKLGYVFLMKGLLLEALTHPSLQESAEGYSYERLE
FLGDAVLDILLTRHLFSSHKDTDEGELTDLRSASVNNENFAQLAVKHKLYQFLQHSSGKL
PENITEYVDSLENSSTDKLNLLSDAALRGPKVLGDVVESIAGAILIDRKLDLEVVWGIFK
PLLSPIVTPEKLELPPFRELLEWCNKSGYFLGIKCTDGIKRTDGDKIEATLDVQLKETLL
VRQGCGKSKKDAKAHAASMLLKDLEEEGLIVPKNASNTQQFQDHRNIFDAMDIQLSTPTR
GKRSAGSKIAASLDKPVDWPVRMSKGGPRAGLYEFCKKLQWPAPNFDCAKVEQSTPTPQG
QGFTFASTIKLHIPNSDVISLTGDCFADKKSAMDSAALLMLYELQQRGRLQVQEIRLP
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggaaccggaatcggcgcccggaggcggagaggccggcgaggacgcgatg
gacgccaccggtcccgcggcggcgccggcggaggcggaggccgccgcccccgtccccgac
gttaacatgaaccctctgaagaggccatcggagtcgtgtgctcaaggagacgaagcagac
gggcagaagcggcagaagacggagtctcaagttttcacacccagaagataccagctcgat
gtctttgaggttgccaaggcgcgaaacacgattgcaatgcttgacacaggagccgggaag
acgatgattgctgtgatgctcatgaaagagtttgggaaaaagattgacaaatcaaataac
aatgggaagatcgtattccttgcaccaacagttcagctcgtcacacagcaatgtgaggtg
attaaaacccacacagattttgaggtggagctgtattgcggtgcctcgggggttgatcac
tggacgcctcagagatggaaagaaaaaatatcgaaatctcaggtcatgatgatgatacca
gatgtgttgctaagtgctttaggcaaagctttcttgagcttggacatggttagtcttatg
atatttgatgagtgccatcgtgcaactggcaaacacccttattcgagaataatgaaggac
tactatcaccaatctgaccacaagccaaaggtgtttggtatgacggcctcgcctgttata
aggaaaggtgtctcttctaatctggattgtgaagttcagttcactgaactggaaaagctt
ctaaatgctaagatctacactgtggctgatagagcagagatagagctttgcgctccttct
gcaaaagaagtggacagatactatgacccaaaaacagtttgtttcaaggatttgagtgaa
gagttgggacttttgcattctgagtacgatgcgttaataactacattgcagaataagcct
aactgccagaataaagaatccgatgaaatagctaaagaatcacggaggcgtctatccaat
tcttcagccaaaatcctgtattgcatcgatgatattggtcttctttgtgctagtgaggcc
accaaaatctacattgaaaggggtcagagaaaaggttggctgaagaaagcttctgatgcc
acaaatattcaaagtgttgcaaatagctcgttcctgcttgcagaaatttcagtgcttcat
ctgaagttctttgaggatatgtcatgtataattgacaagcacctccagcaaggtagcgat
gtgcttctaaattctgagagtggatgtgtggaagcaattaagacgggttatatttcacca
aagctttatgaactcatccaaatcttccactctttcagcaactgtgatcatgtccgatgc
ctcatttttgtggatcgaaagatcactgctagagccatggaacggacaatgaagaaaatt
ggacacctctcacattttacattttcttctcttactggagggagttcttcagtggacgct
ctgacccctaaaatgcaaaaggacacactggattcatttcgctctggaaaggtgaactta
ctatttactacggatgtcgcagaagagggtattgatgtcacagactgctcgtgtgtaata
agatttgatttgccaaagactacccgtagttatatgcagtcacgtggacgagcacgccag
aaggactctcagtacatactaatgattgaaagggaaaatgttaaacaaaataatttgata
tctgccattttgagaagcgagaagtcaatggttgagactgctttgaacagagattccgag
gatctactccctggtttcttcccagttgaagaaaaaaatgaataccttgtaggcacaacc
ggagcaaaagtaactgctggttctagcgttagtgttatcgtccaatactgtgacaagctt
ccaggagacaagtacgacaccacaaaacctttgtttgagttcaccaaccacggtgatggt
tttgtgtgtacgttaacactaccatctagtgacatgttgccacctttggtgggtccaaaa
gcaagaaacaagaagaaagcaaaacagcttgtttgtcttgatgcatgtaagcagctgcat
cagctaggagtacttactgactctctttgtctatctgttgaagagccaccactggaatct
gtgaacaaaactgacgttctcacatctttggctggtgtaggtacaaccaaacgaaaggag
ctacatggtacaactagagtatgtgggttgtctggtacctgggcatcagagagaactgct
gttaagcttcaaggctacagaatgaaatttctttgtgaccaagttggtcagaaatactcc
gattttgttctgttaattgataaaactatagcacatgaagctgctaatttggatattgat
ctgtttctacatgacaagatggtgaaagcttcagtctctccttgtggcctttttgagttg
gatgttcaacagatggagcaagcaaagctatttcaagcacttctgttcaatggtttgttt
ggaaagttgttcactggatcaaaatcatccgacgttccgcgggagtttattctcaataaa
gatgacacgtttatctggaataatccaaatatgtatttgattttacctatggatcctact
gtggagtcccatgatattacatgcatcaactggagagtgattgatgaagccgcaacagct
gttaaacttttgaggaagatttattctgaagaaaaaatgaacatacagggaatacttgat
ttcgaccaaaatgatgaagatctaattcatttcgccaacacttcatgtgagactcatttc
cttagaaatgtggtagtgctggcagtccacacaggaaagatatatactgctcttcatgtt
gccgatctatctgccaatagcacatttgatggtgtatcagatgaaaaaggaacagagttc
cgcacctttgcagaatactttgagaagaagtatggcatagttcttcgtcatccctcacag
ccactactagtgctgaaacccagtcataggcctcacaacattctttcctcgaagctcaga
gatgaaggtaacggtgagaagaaaaagggtggcacatcagatataactaaggcaaacaac
cgtgttcacatgcccccagagttgctgattccccttaatttttctgatgacattttaaga
acattttatttgttcccatctttgatgcatcgtatagaggcattaatgctagccagtcaa
ctaaagagtgaaatttcatatgacgattctaatgtatcaagctttctgattctagaagct
atcacaactcttcgatgctctgaagacttctcaatggagcgtctggaattattgggagat
tctgtgttgaagtatgtcgttagttgtcaccttttcctaaaatttcctaacatggatgag
gggcagttaacatccagtagggttgatataatatctaatgctgcactttatgggtttgga
attgaacacaaaatacagggttatatacgtgatgctgcatttgatcctcgtcgatggctt
gcaccaggacagctctccattcatcctgttccttgtaattgccaagtaaattctgaggtt
gtcactgaggatattaatgtgaaagtaggccagctgtgtgataagggacacagatggatg
tgttccaaaacaatttctgattgcgtcgaagctataatcggtgcatattatgtagaaggt
ggcttaagagcagctatggctgttctcaaatggttgggaattaatgttgaagttgaggaa
gaattgattggtcagttcttgagtgcatctgtgcagacttatcttccaaaaaatgatgta
attgaaaaggttgaagcaaaactaggctatgtatttttgatgaaaggtcttctgctagaa
gctcttacccacccatcactgcaggaatcagcagaaggatattcctacgagcgtctggag
ttccttggtgatgctgtcttggatattcttttaacacgacatcttttctctagtcataaa
gacaccgatgagggggagctgacagatttacggtctgcatcagtaaacaatgaaaatttt
gcacaactcgcagtgaagcataagttatatcagtttctccagcattcttctgggaaatta
ccagaaaatattactgaatatgtggatagtttagagaattcttccacggacaaactcaac
cttttatcagatgcggcattaagagggcctaaggttctgggtgatgttgtagaaagtatt
gcgggtgcaattcttatagatagaaaacttgatttggaggtagtttggggtattttcaaa
cctcttctttcccctattgttacacctgagaagctggagttacctcccttcagagagctt
ctcgaatggtgcaacaaaagtgggtactttctaggaattaagtgtacagatggaattaag
cgtacagatggagacaaaatagaggctactctggatgtgcaactcaaggagacgctcctt
gtcaggcaaggttgtggcaagagcaaaaaggatgctaaagcacatgcagcttccatgtta
ctcaaggaccttgaggaggaaggacttatagtaccaaagaatgcaagcaacacgcaacag
ttccaggatcatcgtaacatttttgatgcaatggatatacaactttcaacaccaaccagg
ggaaagcgatcagctggatcaaagatagctgccagtcttgataaaccagtggactggccg
gtgagaatgagcaaaggaggaccccgtgcaggactgtatgagttctgcaaaaagttacaa
tggccagctcccaatttcgattgtgcgaaggtagaacaaagcacgcctacgcctcaaggt
caagggttcaccttcgcgtcaaccataaaactgcacataccgaatagtgatgtgatcagc
ctcacaggggattgctttgcggataagaagagcgcgatggattccgccgcactgctcatg
ctctatgagcttcagcagcgagggagattgcaagtccaggagattcgtcttccctga
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integrated database retrieval system
