Triticum aestivum (bread wheat): 123063510
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Entry
123063510 CDS
T07757
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123063510
03015 mRNA surveillance pathway
123063510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123063510
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123063510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123063510
NCBI-ProteinID:
XP_044343254
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All DBs
Position
3A:complement(725621630..725627076)
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AA seq
426 aa
AA seq
DB search
MAKPRRGRSGSRSSSGSSSRSASSGSSRSRSRSRSLSSSSSSPARSRGRSPPAAKRSSPG
AKKGRSPSPALKKGSPSRKGRSSSPPPKKASPPRKASPPPQSVVLHVDHLSRNVNEAHLK
EIFGNFGEVVNVELSMDKFVNLPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLKFTL
PPRQRASSPLKPPPPPPKRDAPPNDKVAIGAEKDAQQRPGGSASPRKKPASPPRKRSPPN
RRAESPRRPPNPSPRRRADSPIRRRPDLSPVRRGDRRPGSPIRRRSPSPRRHRSPMRRGR
GSLSPRRRSPGPPRRSPGPPRRRSPPPRRLRSPPRRPPPPPPRRHSRSPPPRRPLHSRSR
SISPRRGRGPPLRRGRSDSSYSASPSPPRKGPRRVSRSRSPRRPPRGRSGSSDSGSSSSS
PTPRRR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccccgccgcggccgctccggctcgcggtcctcgtcgggctcctcctcccgc
tccgcgtcctcgggctcctcccgctcgcgctcgcgctcccgctccctctcgtcgtcctcc
tcatcgcccgcccgctcccggggccgctcccctcccgccgccaagcgcagttcacctgga
gcaaagaaaggtcgatcaccttcacccgctctcaaaaaagggtcaccatcaaggaaaggc
cgctcatcatctcccccaccgaagaaagcttcacctcctaggaaagcatctcctcctcct
cagtcggttgtactacatgttgatcatctatcccgaaatgtgaatgaggctcatttgaag
gagatatttggaaattttggtgaagtggtgaatgtggagctatcaatggacaaatttgtt
aatctccctcgtgggtatggatacatcgagttcaagaagaggactgatgctgagaaggct
cttctttacatggatggtgggcaaattgatggaaatgttgtcaagttgaagttcacactg
ccaccacgccaaagggcttcttcacctttaaagccacctcctcctccccccaaaagagat
gctcctccgaatgataaagttgctattggtgctgaaaaggatgctcagcagcggcctggg
ggatcagcatctccacgaaagaagccagcttctccgccgcgaaagaggtctcctccaaat
agaagggctgagtcaccccggcgtccacccaatccatctccaaggcgtcgtgctgattct
cctattcgtcgtcgaccagatctttcccctgttaggcgtggtgatagaagaccaggatct
ccaattagaagacgttctccttcacctagaaggcataggtcaccaatgcggaggggtcgt
ggcagcttatcaccgcgcagacgctccccggggcctcctaggcgctcacctgggcctccc
agacggcgatcaccaccaccaaggaggttgaggagtcctccaagaaggccaccaccacca
cctccgcgtcgtcacagccgctcccctcctcctcgccgccctcttcactcccgctccaga
tcaatttctccacgcaggggccggggaccaccattgaggcgtggaaggtcagattcatcc
tattctgcatcacccagtcctccaagaaagggaccgagaagggtgtcaaggagccgcagc
cctagaaggcctcccagaggaaggagtggctctagcgacagcgggagcagcagctcttcc
ccaaccccaaggcgcaggtag
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