Triticum aestivum (bread wheat): 123065554
Help
Entry
123065554 CDS
T07757
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
KO
K14962
COMPASS component SWD2
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123065554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123065554
03036 Chromosome and associated proteins [BR:
taes03036
]
123065554
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123065554
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
123065554
COMPASS/SET1 complex (yeast)
123065554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
PQQ_3
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
WD40_RFWD3
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_IFT122_2nd
AC_1
Motif
Other DBs
NCBI-GeneID:
123065554
NCBI-ProteinID:
XP_044344748
UniProt:
A0A3B5Y5P4
LinkDB
All DBs
Position
1A:546329862..546337798
Genome browser
AA seq
320 aa
AA seq
DB search
MAATLSQLDDGIVRSMAIGAVFTDYAGKISCLDFHRKEDLLVTSSEDDSIRLYNTTSATL
SKTTYHKKHGADRVCFTHHPSSILCSSRYNVESGESLRYLSLYDNRCLRYFKGHKDRVVS
LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPSVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSVLLTTTNNHIYVLDAYGGEKKCGFS
LEPSRNIATEAAFTPDGQYVISGSGDGTLHAWNINTVQEIACWNSHIGPITALKWAPRRA
MFATASTALTFWIPNESSSS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgctgtcgcagctggacgacggcatcgtccgcagcatggccatcggcgcg
gtcttcaccgactacgccgggaagataagctgcctcgacttccaccgcaaggaggacctc
ctcgtcacctccagcgaggacgactccattcgcctctacaacaccaccagcgccacgttg
tcgaagacaacttatcataaaaaacatggtgctgaccgtgtctgttttactcatcatccg
agttccatattatgttcatcaagatacaatgtggagtcaggagaatcacttcgttacctg
tcattgtatgacaaccgttgcttgagatatttcaaaggacacaaagacagggttgtttca
ctatgtatgtcacctgtcaatgatagctttatgtcggggtcacttgatcacagtgtcaga
atatgggatcttcgtgtaaatgcttgtcagggtatactacgtctgcgtggtaggccttct
gttgcatatgatcagcagggacttgtttttgctgtagcaatggagggaggtgctattaag
ctgttcgattctcggtcatacgacaagggtccatttgacactttcttggttggtggagat
acggctgaagtgtctgacattaaattcagcaatgatggcaagtctgtgcttttgactaca
actaacaaccatatatatgttctggatgcatatggaggggagaagaagtgtggcttcagc
ttggagccatctcgcaacattgcaactgaagctgctttcactccagatggtcaatatgta
atttcaggatctggtgatggtaccttgcatgcttggaacatcaatacagtacaggagatt
gcctgttggaacagtcatattggtcctatcactgctttgaaatgggcccctcgtcgagct
atgttcgcaactgcatcaaccgcactaactttctggattcccaacgaatccagttcgagt
tag
DBGET
integrated database retrieval system
