Triticum aestivum (bread wheat): 123067360
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Entry
123067360 CDS
T07757
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta''-like
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123067360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123067360
03400 DNA repair and recombination proteins [BR:
taes03400
]
123067360
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123067360
Transcription machinery [BR:
taes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
123067360
DNA repair and recombination proteins [BR:
taes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
123067360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
DUF4407
Motif
Other DBs
NCBI-GeneID:
123067360
NCBI-ProteinID:
XP_044346123
LinkDB
All DBs
Position
1A:556479743..556484088
Genome browser
AA seq
1472 aa
AA seq
DB search
MAERANLVFHNKEIDGTGMKRLISRLIDHFGMGYTSHILDQLKTLGFHQATTTSISLGIE
DLLTIPSKGWLVQDAEQQSFLLEKHYYYGAVHAVEKLRQSVEIWYATSEYLKQEMNSNFR
ITDPSNPVYLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII
SCYGARKGVVDTAVRTADAGYLTRRLVEVVQHIIVRRRDCGTIRGISVSPQNGMTEKLLV
QTLIGRVLADDIYIGSRCIAARNQDIGIGLVNRFITAFRAQPFRAQPIYIRTPFTCRSTS
WICQLCYGRSPTHSDLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTADLVRSP
SNGKXKFNENLVHPTRTRHGQPAFLCYIDLHVTIQSQDILYSVNIPSKSLILVQNDQYVK
SEQVIAEIRAGTSTLHFKERVQKHIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLW
ILSVSMCRSSIASFSLHKDQDQMNTYGKKDREILDYSTXGRIMSNGHWNFIYPSIFQDNS
DLLAKKRRNRFVIPLQYHQEQEKELISCFGISIEIPLMGVLCRNTIFAYFDDPRYRKDKK
GSGIVKFRYRTLEEEYRTRAEDSEEEYETLEDEYRTQEDEYEYETLEESKYGILEDEYEY
ETLEDEYGNPENEYRTLEKDSEEEYGSPESKYRTQEDEYGTIEEDSEDEYGNPGESAEEK
YGTLEEDSEEDSEDEYESPEEDSILKKEGLIEHRGTKEFSLKYQKEVDRVFFILQELHIL
PRSSSLKILDNSIIGVDTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKIL
GGCLIPPERQKKDSKESKKRKNWVYVQRKKILKSKEKYFVSVRPTVAYEMDEGRNLATLF
PQDLLQEENNLQIRLVNFISHENSKLTQRIYHTNSQFVRTCLVVNWEQEEKEKAGASLVE
VRANDLIRDFLRIELVKSTISYTRKRYDRTSAGPIPHNRLDRANINSFYSKAKIESLSQH
PEAIGTLLNRNKEYHFLMILSASNCSRIGLFKNSKHPNAIKEWNPRIPIREIFGPLGAIV
ASISHFSSSYYLLTHNKILLKKYLFVDNLKQTFQVLQELKYSLIDENKRISNFDSNIMLD
PFLLNCHFVHHDSWEETSAIIHLGQFICENVCLFKSHIKKSGQIFIVNMNSFVIRAAKPY
LATTGATVNGHYGEILYKGDRLVTFIYEKSRSSDITQGLPKVEQIFEACSIDSLSPNLER
RIEDWNERIPRILGVPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQ
VTSKVRVSEDGMSNVFSPGELIGLLRAERAGRALDESIYYRAILLGITRASLNTQSFISE
ASFQETARVLAKAALXGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSPQDKNLYFEIKK
KNLFASEMRDFLFLHTELVSSDSDVTNNFYET
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgggccaatctggtctttcataataaagagatagacggaactggtatgaaa
cgacttattagcagattaatagatcattttggaatgggatatacatcccatatactggat
caactaaagactctgggcttccatcaagccactactacatcgatttcgttaggaatcgag
gatcttttaacaataccctctaagggatggttagtccaagacgcggaacaacagagtttt
cttttggagaaacactattattatggggctgtacacgcggtagaaaaattacgccaatct
gttgagatatggtatgcgacaagtgaatatttgaaacaagaaatgaattccaattttcgg
ataacggatccttctaatccagtctatctaatgtctttttcaggagccagaggaaatgca
tctcaagtacaccaattagtaggtatgagaggattaatgtcggaccctcaaggacaaatg
attgatttacctattcaaagcaatttacgcgagggactttctttgacagaatatataatt
tcctgctatggagcccgcaaaggggttgtagatactgctgtgcgaacagcagatgctgga
tatcttacacgtagacttgttgaagtagttcaacatattattgtgcgtagaagagattgt
ggtactatccgaggtatttctgtaagtcctcaaaatgggatgacggaaaaacttcttgtc
caaacactaattggtcgtgtattagcagacgatatatatatcggttcacgatgcattgcc
gcgcgaaatcaagatattggaattggattagtcaatcgattcataactgcctttcgagca
caaccatttcgagcacaaccaatatatattagaaccccctttacttgccgaagcacttct
tggatctgtcaattatgctatggccggagtcctactcatagtgatctggtcgaattggga
gaagccataggtattattgcaggtcaatcaattggggagccagggactcaactaacatta
agaacttttcatactggcggagtattcacagggggtactgccgaccttgtacgatcccct
tcgaatggaaaantaaaattcaatgagaatttggttcaccccacacgtacccgtcatggg
cagcctgcttttctatgttatatagacttgcatgtaactattcagagtcaagatattcta
tatagtgtgaatattccctcaaaaagcttgattctagtgcaaaatgatcaatatgtaaaa
tccgaacaagtaattgcggagattcgtgccggaacgtccactttacattttaaagaaagg
gtacaaaagcatatttattctgaatcagacggcgaaatgcactggagtactgatgtttac
catgcgcccgaatatcaatatggtaatcttcgccgattaccaaaaacaagccatttatgg
atattgtcagtaagtatgtgcagatccagtatagcgtctttttcactccacaaggatcaa
gatcaaatgaatacttatggtaaaaaagatagggaaattcttgattattcaacgntcggt
cgaatcatgtccaatggccattggaattttatctatccttctatttttcaagataattca
gatttgttggcgaaaaagcgaagaaataggttcgtcattccattacaatatcatcaagaa
caagagaaagaactaatatcctgttttgggatttcgattgaaatcccccttatgggtgtt
ttatgtagaaatactatttttgcttattttgacgatccccgatacagaaaagataaaaag
ggttcaggaattgttaaatttagatataggaccctagaagaagaatataggactcgagcg
gaagactcagaagaggaatatgagaccctagaagacgaatacaggacccaagaggacgaa
tatgaatatgaaaccctagaagaatctaaatatggaatcctagaagacgaatacgaatat
gaaaccctagaagacgaatatgggaacccagagaacgaatataggactttagagaaagac
tcagaagaggaatatgggagcccagagagcaaatataggacccaagaggacgaatatgga
actatagaggaagactcagaagacgaatatggcaaccccggggaaagcgcagaggaaaaa
tatggtactttagaggaagactcagaagaagattcagaggatgaatatgagagcccagag
gaagattccatcttaaaaaaagagggtttgattgagcatcgaggaacaaaagaatttagt
ctaaaataccaaaaagaagtagatcgggtttttttcattcttcaagaacttcatatcttg
ccgagatcttcatccctaaagatacttgacaatagtattattggagtggatacacaactc
acaaaaaatacaagaagtcgactaggcggactggtccgagtgaagagaaaaaaaagccat
acggaactcaaaatattttccggagatattcattttcctgaagaggcggataagatatta
ggtggctgtttgataccgccagaaagacaaaaaaaagattctaaggaatcaaaaaaaagg
aaaaattgggtctatgttcaacggaaaaaaattctcaagagcaaggaaaagtattttgtt
tccgttcgccctacagtggcatatgaaatggacgaaggaagaaatttagcaacacttttc
ccgcaggatctcttgcaagaagaaaataacctccaaattcgacttgtcaattttatttct
catgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaact
tgcttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgag
gtaagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatt
tcgtatacacgaaaaaggtatgataggacaagtgcaggaccgattccccataataggtta
gatcgcgccaatatcaattctttttattccaaggcgaagattgaatcacttagccaacat
ccagaagctattggcactttgttgaatcgaaataaagaataccactttttgatgattttg
tcggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgata
aaagaatggaatcctagaattcctattcgagaaatttttgggcccttaggcgctattgta
gctagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgtta
aaaaaatatttgttcgttgacaatttaaaacaaaccttccaagtacttcaagaacttaaa
tactctttaatagatgaaaataaaaggatttctaatttcgatagtaacataatgttggat
ccattccttttgaattgtcactttgtccatcatgattcttgggaagagacatcggcaata
attcaccttggacaatttatttgtgaaaatgtatgtctatttaaatcgcacataaaaaaa
tccggtcaaattttcattgtaaatatgaattcctttgttataagagcagctaaaccttat
ttggccactacaggagcaactgttaatggtcattatggagaaatcctttacaagggagat
aggttagttacgtttatatatgaaaaatcgagatctagtgacataacgcaaggtcttcca
aaagtggaacaaatctttgaagcgtgttcaattgattcattatccccgaatctcgaaagg
agaattgaggattggaatgagcgtataccaagaattcttggggtcccttggggattcttg
attggagctgagctaaccatagcccaaagtcgtatctctttggttaataaaatccaaaag
gtttatcgatcccaaggggtacagatccataatagacatatagagattattatacgccaa
gtaacatcaaaagtgcgggtttccgaagatggaatgtctaatgttttttcgcctggggaa
ttaatcggactattgcgagcggaacgagcagggcgagctttggatgaatcgatctattat
cgggcaatcttattgggaataacaagggcttccctgaatacccaaagtttcatatctgaa
gcaagttttcaagaaactgctcgagttttagcaaaagctgccctatgaggtcgcattgat
tggttgaaaggcttgaaagaaaacgtagttctgggggggattatacctgttggtaccgga
ttccaaaaatttgtgcatcgttccccacaagacaagaacctttatttcgaaataaaaaaa
aaaaatctattcgcgtcggaaatgagagattttttgtttctccatacagaattagtttct
tcagattctgacgtaacaaacaatttttatgagacataa
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integrated database retrieval system
