Triticum aestivum (bread wheat): 123068696
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Entry
123068696 CDS
T07757
Name
(RefSeq) DNA excision repair protein CSB-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123068696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123068696
03400 DNA repair and recombination proteins [BR:
taes03400
]
123068696
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123068696
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
123068696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
WHD_SOWAH
AAA_34
Motif
Other DBs
NCBI-GeneID:
123068696
NCBI-ProteinID:
XP_044347250
LinkDB
All DBs
Position
3B:complement(75988777..75993969)
Genome browser
AA seq
1269 aa
AA seq
DB search
MEEEDDDQRLLHSLGVTSANIDDIERKILSQAKTDPKKGDAEASGPPAGGDQETKLTTPQ
DDAQAKLHQKLRSVQLEIDAVASTLGGAKQAAGKKSGGGGSGRADAEDKKKKKEKVKEEE
NADEDAPRGGALQQALAAERLRSLKRAKVQIQREILQSGPGPSGSGNQKDKMLAMLVEDE
PRRKKSLKPPGGPKKKSPTRRLKTVTYDDDDDFDAVLDGASAGFMETEREELIRKGLLTP
FHKLKGFEKRVECPGTSSRQNDSAEQAQETMEASSIAKVAQAMQNMAQSRPTTKLLDAEF
LPKLDAPTAPFQRLGVPLKRPGLPSSDERKNKRLKSKTKRPLPGKKWMKANSKKESLLDG
MPRPLQPSELFFALVLFYAHGKCSQVSLFATTLYQDTSVNSSCLVSAVADEDVGDAAASA
SVSENEDEVIEDSDGLPPVILEGGLRIPGSVYTQLFDYQKVGVQWLWELHCQRAGGIIGD
EMGLGKTVQVLSFLGALHDSGMYKPSIVICPVTLLQQWRREASKWYPKFKVEILHDSANS
SSKKGKRYSDSESDVSWDSDQEEVTRAKPAQKWDDLISRVVNSGSGLLLTTYEQLRIIRE
KLLDVEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF
PGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQ
LPKKTEQVLFCSLTQEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLERE
QAAQNPDYGNTERSGKMKVVEQVLKVWKDQGHRVLLFAQTQQMLDILENFLTARDYQYRR
MDGLTPPKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQA
RERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARDMKDL
FTLQDDDKNGSTETSNIFGQLSEDVNIGAPDGEERGEGSSALPTSAEAEPSVDGNRKSDL
RSDQADEESNILKSLFDGQGVHSAINHDAIMSANDDQKLRLEAEASQVAHRAAEALRQSR
MLRSRDDFAVPTWTGRAGAAGAPSSVRRKFGSTLNTQLVSSLQPSEGSSSSSSRVQSLQV
GALHGKALSSAELLAKMRGTREGAASDALEHQLSLGSASNQRPGSTENGRTSNSNSSRNM
IVQPEVLIRQLCTFIQQNGGSASSTSLTEHFKNRIQPKDMLVFKNLLKEIATLQRGAGGA
TWVLKPEYG
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggacgacgaccagcgcctgctgcacagcctcggcgtcacctccgccaac
atcgacgacatcgagaggaagatcctttcgcaggcgaaaaccgaccctaagaagggcgac
gccgaggcgtcggggccgcccgctggcggtgaccaggagactaaactcacaacgcctcaa
gatgatgctcaggccaaactgcaccagaaactgcggtccgtgcagcttgagatcgatgct
gtggcttctacacttggaggggctaaacaagctgctggaaagaaaagcggcgggggcggc
tcgggtagagctgacgccgaggataagaagaagaagaaggagaaggtgaaggaggaggag
aatgctgatgaagacgcccctcgtggaggagcgctccagcaggcgcttgccgccgagcgg
ctcaggagcctcaagagggctaaggtgcagattcagagagagatattgcagtcgggacct
ggcccgtccgggtcgggcaaccaaaaagataagatgctggcaatgctggttgaagatgag
cccaggcggaagaagtcgctgaagccgcctggtgggcctaagaagaagtcgccgacacgt
cggttgaaaaccgtcacctatgatgatgacgacgacttcgatgcagtgctcgatggagct
tctgcggggttcatggagactgaaagggaagagctgatcaggaagggtctgctgacaccg
tttcacaagttgaagggctttgagaagcgcgttgaatgccctggaacttctagcaggcaa
aatgactctgcagaacaagcccaggaaaccatggaagcttccagcattgctaaagttgct
caggcaatgcagaacatggcacaaagccgcccaactaccaaattgcttgatgcggagttc
ttgcctaagctggatgcaccgactgctccgtttcaaaggcttggagtacctctaaaacgc
cctggccttcccagctcagacgagcggaaaaacaaaaggctaaagagtaagaccaagaga
ccgttgcctggcaagaaatggatgaaagccaactcaaagaaggagtcattattggatggt
atgccaaggcctcttcagccttcagagcttttttttgctttagtgttattctatgcacat
ggaaaatgcagtcaggtttccttatttgctaccactttgtaccaagatacctcagtgaac
tcatcatgtctggtttctgcagttgcagatgaggatgttggagatgcagccgcatcagct
tctgtgtctgagaatgaagatgaagtaatagaagattctgatgggttacctccagtcatc
cttgaaggtggtttaagaattcctggctcagtttacacacagctgtttgactaccaaaaa
gtgggagtgcagtggttatgggagttacattgtcaaagggctggtggaataattggcgat
gaaatgggcttaggaaagaccgtgcaggtcttatcatttcttggtgctttgcatgacagt
ggtatgtacaagcctagtattgttatctgtcctgtgacccttttgcaacagtggcgaagg
gaggccagtaagtggtatccaaaattcaaagttgagatcttacatgattctgcaaacagt
tcaagtaagaagggcaagagatacagcgattctgagagtgatgtttcttgggatagcgat
caggaagaggttacacgggcgaagcctgcacaaaagtgggacgacttgatttcacgtgtt
gtaaattcagggtcaggtttgcttctgacgacatacgagcagctaagaatcatacgggag
aagttgcttgatgtagaatggggatatgctgtattggatgagggtcaccgcataaggaat
cctaatgccgaagtaactcttgtgtgcaagcaattgcagactgtgcacaggataattatg
acaggggcgcctattcagaataaactttcggaactgtggtctctctttgattttgtgttc
cctgggaaattaggagtcctgccagtgtttgagactgagttctctgttccaattactgtc
ggtgggtatgctaatgcaacaccgttgcaagtgtccacagcgtacagatgtgctgttgtc
ctgcgtgacttgatcatgccatatcttcttaggagaatgaaagctgatgtcaatgcacag
cttcccaagaaaacagagcaggttcttttctgtagtttaactcaagagcaacgtgctact
tatcgtgcatttcttgctagttcagaggtggaacaaatatttgacggtaacagaaactcc
ctttacgggatagatgttctaaggaagatatgtaatcatcctgatcttcttgagagagaa
caagctgctcagaatcctgactatgggaatactgaaagaagtggaaagatgaaagtggtt
gagcaagtccttaaagtctggaaagatcaaggccatcgtgttcttctttttgctcagacc
caacagatgcttgacattttggagaacttcttgaccgcccgtgactaccaatatcgacga
atggatggacttacacctccaaagcaaagaatggcactcattgatgagttcaataataca
gatgaaattttcattttcattctgacaacaaaagttggtggattgggtacgaatttgact
ggtgcaaacagggttataatatttgatcctgactggaacccttcgacagacatgcaggcc
agggaacgagcatggcgaattgggcaaaaaagagacgtgacagtttacaggttgatcaca
cgtgggacgatagaggagaaagtttaccatcgacagatatacaagcattttctcacaaac
aaagtactgaaaaaccctcagcaaaggaggttctttaaagccagggacatgaaagattta
ttcacattgcaagatgatgacaagaatggttcaactgaaacatcaaacatttttggccaa
ttgtctgaagatgtgaacatcggtgctccagatggtgaggagcgaggcgagggatcttca
gctttaccgaccagtgcagaggctgaaccatctgttgatggaaataggaaatcagacctt
agatctgaccaagcggatgaagaatccaacattttgaagagtctttttgatggccagggc
gttcatagtgccataaatcatgatgccataatgagtgctaacgacgatcagaagctgcgc
ctagaagcagaagcttcacaggtggcacacagggcagctgaggctttacgccaatcacgg
atgctcagaagccgtgatgactttgctgttcccacatggacaggaagagctggtgctgcc
ggggcgccgtcttctgtccgcaggaaatttgggtcaacactcaacacccagctggttagt
tctttgcagccatcagaaggttcaagcagcagcagcagcagggttcaaagtcttcaggtg
ggcgctctacatggcaaagcgctgtcctctgccgagcttctggctaagatgcgtggaacg
cgagagggggcagcttcagatgcactggaacatcagctcagcctgggctccgcttccaat
caaagaccaggctcgacagagaacgggcgcacatcaaactctaattctagcaggaacatg
atcgtgcagcctgaggtcctgatccgccagctgtgcaccttcatacaacaaaacggtggc
tccgccagctcgacgagcttgacggaacatttcaagaaccgcatacaaccaaaggatatg
ctggtgttcaagaacctgctcaaggagatagcaaccttgcaaaggggcgcaggcggcgca
acgtgggtgctgaaacccgagtatgggtaa
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integrated database retrieval system
