Triticum aestivum (bread wheat): 123068848
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Entry
123068848 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123068848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123068848
03009 Ribosome biogenesis [BR:
taes03009
]
123068848
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123068848
Spliceosome [BR:
taes03041
]
Complex A
U1 snRNP components
U1 related factors
123068848
Complex B
123068848
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
Pre-60S particles
Helicases
123068848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123068848
NCBI-ProteinID:
XP_044347466
LinkDB
All DBs
Position
3B:complement(95648519..95656061)
Genome browser
AA seq
1347 aa
AA seq
DB search
MAGAEAAADSSGPRFAPDDPTLPAPWKALIDGETLYYWNPETNLTQYDKPGAAAPPVPAA
APAPAPGAFAQPGMQQQQQPQQQQTAQQPPFQYQGQQAQQLQFQYQQQQQQQQQQEQMPN
QQGSQQPLAPQYPNAHQQPMPYQHGHYMQPQQQYSYQVGQQQQMPQTQYNQGQQMPIPQA
ANQGQQPTMPPGAYNQGQRPPMPQAAYSHGQRPPMPQSAYNQGQQPQMPHASYNQGQQLQ
GTRMPHTQVQHAQQSPGFHQPAQASQGLQASQPQVPQMSPQQGQLQHGFQFTPQQGKQPH
HGHLVTQHGQQNTTAKVDAGAHPEGKQTGFSLPLSQQHGQVPLSNQTLPSSHQRPEAHNQ
VNIHGVGGPPYPAKHHLGGSSPGETNNVSFLSAPAQTHQGGVDTNYRQQLASSHVVPNHI
APSPGRPPMGFKRGNSEDQFEKNEPLSSGRFDGINALHQQPKLAALPPSQNHLRDMRNGP
PYSQPDNFGGYNMAPPHLVQNPLNNGPFPIGALTRPPSGTFSPPDFPSVASVDAYRQHHE
VTAVGENVPPPFMTFEATGFPPEILSEVHAAGFLNPTPIQAQTWPVALQSRDIVAIAKTG
SGKTLGYLIPAFVHLRRCQNNPMSGPTVLVLAPTRELASQIQDEAIKFGRSSRVSCTCLY
GGAPKGPQLRELERGADIVVATPGRLNDILEMRKISLRQISLLVLDEADRMLDMGFEPQI
RKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLRNPVQINIGSIDELVANKSITQYVEMVP
PMDKQRRLEQILRAEERGSKIIIFCSTKKMCDQLARSIGRSFGAASIHGDKSQGERDHIL
GQFRAGIVPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTF
FSEQDWKYAADLVKVLDGTGQQVPPELQQMAARGASGAPRNQAGGMSRWDGPGGGSRFES
AVGGPGGYGGIREGPGGFGGRDGPGGFVDRDGPGRFGDRDGPGRFGGRETPDGFGGRDGP
GGFDGRMGPGPGGFGGREGPGGFGGREGPGGFGGREGPGGFGGREGPGPSGFSGRGGRGS
DGFGRRGGASPGRFGGHGGRGDSPGFGGRGRGDSSGFGGRGRGDFSGGRGGRGRGFGGRG
CSDRGPHDRFISDGRGRYDGRRGFDKGRGSSYSRSPDRSRSRGYDRRSDSRSLSSRSRSR
SRSWSRSRSRSRSWSRSCSRSRSRSRSRDQGPVERRPRVRSGFDVLPPATEAGAAVTGPL
PVPLPGSVSDGTAPIPRQSLADASDMSPMSPGGLVHVQEGAPFMGGNDANISSRQADQPS
QATDLAIPPSFSAAANFPGPAVQQDAP
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcagaggctgccgcggattcatcgggcccgcgattcgcccctgacgacccg
acgctccctgcgccttggaaagcactaatcgacggcgagacgctctactactggaaccct
gagacgaacctcactcagtatgacaagccgggtgcggccgcgcctcccgtgccggcggct
gcgccagcgccagcgcccggggcttttgcgcagcctggcatgcagcagcagcagcagcca
cagcagcagcagacggcacagcaaccgccgtttcagtatcaaggtcagcaagcacagcaa
ctgcagtttcagtatcagcagcagcagcagcagcagcagcagcaagaacagatgccgaac
cagcaggggtcacaacagccactagctcctcagtacccaaacgctcatcagcagccaatg
ccatatcagcacggtcattatatgcaaccccagcagcaatattcatatcaggtaggccag
cagcaacaaatgccgcaaactcagtataatcaaggtcagcagatgccaatcccgcaagct
gccaatcaaggtcagcagccaacgatgccaccaggagcttacaatcaaggtcagcgtcca
ccgatgccgcaagctgcctacagtcatggccagcgcccccctatgccacaatctgcctac
aatcaaggccagcagccacaaatgccgcatgcttcttacaatcaaggtcagcagttgcag
ggaacaaggatgcctcacactcaagtgcaacacgcacaacaatcaccaggctttcatcaa
cctgcccaggcttcacaagggttgcaagcttcacagcctcaagtacctcaaatgtccccc
caacagggccaactccagcatggcttccagttcacccctcaacagggaaaacaaccacat
catggtcatcttgtcacccaacatgggcaacaaaataccacagcgaaggttgatgcagga
gctcatcctgaaggaaagcagactggcttttccttaccgcttagtcagcagcatggccaa
gttcctctttcaaaccagacgttgccttctagtcatcaacgtcctgaagcccataatcaa
gtaaatattcatggagtcggagggccaccatatcctgcaaagcatcatcttggcggatca
tccccaggtgaaactaataacgttagtttcttgagcgcacctgctcaaacacatcaaggc
ggagtggatactaattaccggcaacaactggctagtagccatgtagttcccaatcatatt
gctccttcaccaggtcgacctccaatgggtttcaagagaggcaatagtgaagatcaattt
gaaaaaaatgagcctctctcctctgggaggtttgatggaataaatgctctccatcagcag
ccaaaacttgctgctcttccaccctcacaaaaccacctgcgggatatgaggaatggccca
ccttattcccagccagataattttggtggttataacatggcacctccacatttggtacaa
aacccacttaacaatggtccatttcctatcggagctttaacgaggccaccatccggaaca
ttttctcctcctgatttcccaagtgtcgcttcagttgatgcatatcgtcaacaccatgaa
gtaactgcagtgggcgagaatgttcctcctccatttatgacatttgaggctactggattc
ccccccgagatcctgagcgaggttcatgctgctggcttcttaaaccccaccccaattcag
gctcaaacatggcctgttgcacttcaaagcagggacatagtagctattgcgaagacagga
tcggggaagacactggggtaccttattcctgcttttgtacatctgaggagatgccaaaac
aatccaatgtcgggtcctacagtgttggttttggcccctactcgtgagcttgcttcacaa
atacaagatgaagcaattaagtttggtcgatcatctagagtgtcatgcacatgcctgtat
ggtggagctccaaagggacctcagctcagagaacttgagcgtggagcagatattgtggta
gctacccctggacgactcaatgatattctggaaatgaggaagattagtctccgtcagatt
tcattacttgtgcttgatgaagctgaccgcatgcttgacatgggctttgagccacaaata
cggaagattgtggacgagattcctcgtaatagacaaactctgatgtacactgccacttgg
ccaaaggaggttacaaaaatagctggggatttattgagaaatcctgtccagatcaatatt
ggtagcattgatgaacttgttgccaacaaatccatcacacagtatgtagagatggttcca
cccatggataagcagcgtcgcttggagcagattcttagagctgaagaaaggggctcaaag
atcatcatattttgctcaaccaagaaaatgtgcgatcagcttgctcgtagcattggtcgt
agttttggtgctgcaagcattcacggcgacaaatcacagggtgaaagggatcatattcta
ggtcagtttcgggctggtattgtgccagtattagtggccacagatgttgctgctcgtgga
cttgacatcaaagacatcagagtggtgatcaattatgacttcccaactgggatcgaagac
tatgtgcatcgcatagggcgtacaggaagggctggggctactggagttgcatacactttc
ttctctgagcaagattggaaatatgctgctgatttggtgaaagtcttggatggtactggt
cagcaggtacctccagagctgcaacagatggctgcacggggtgcgtctggtgctccaaga
aaccaggctggtggcatgagccgttgggatggtcctggtggtggtagtcgttttgaatct
gctgttggcggccctggtggctatggtggaattagggagggccctggaggctttggtggt
cgagatgggccaggtggatttgttgatcgggatggcccgggcagattcggtgatcgagat
ggccccggccgctttggtggtcgagagactcctgacggctttggtggtcgggatggccct
ggtggctttgatggacggatgggccctggtcctggtggctttggtggacgggaagggcct
ggtggatttggtggaagggaggggcctggtggatttggtggaagggaggggcctggtgga
tttggtggaagggagggtcctggacctagtggcttcagcgggagaggggggcgtgggtct
gatggctttggcaggagaggtggagcaagccctggtagatttggtggtcacggtggcagg
ggtgattctcctggttttggtggtcgtggtaggggtgattcttctggttttggtggacga
ggccggggtgatttctctggtggacgtggtggaagagggcgtggatttggaggacgggga
tgttctgaccgaggtccacatgatcgttttatctcagatggacgtggaaggtatgatggc
cgtcgaggatttgacaagggtcgaggcagtagctacagccgtagcccagatagaagccgc
tcgcgaggctatgacagaagaagtgatagcaggagcctaagtagtaggagcagaagccgt
agcagaagctggtcacgcagcaggagtcgcagcaggagttggtcgcggagctgcagccgt
agtcgcagcaggagcagaagccgtgatcagggtccagtagaacgcaggccacgggtaaga
tctggttttgatgtgctgccacctgcaactgaagctggagctgctgtaactgggccactt
cctgtaccactacctggttcagtgtctgatggtactgcacccatacctagacaatcgctg
gctgacgcatctgatatgtcacctatgtcgcctggtggcttggtccatgtccaggagggt
gcaccgttcatgggtgggaacgatgccaacattagcagcagacaggctgaccagccttcc
caagcgactgatctagcaataccaccgagcttctctgcagctgcaaattttccagggccg
gcagttcagcaggatgccccatga
DBGET
integrated database retrieval system
