Triticum aestivum (bread wheat): 123068937
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Entry
123068937 CDS
T07757
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123068937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123068937
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123068937
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123068937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD_DEAH11
KH_DEAH11_2nd
KH_DEAH11_1st
KH_DEAH11
RRM_DEAH11
Helicase_C
DEAD
OB_NTP_bind
zf-RING_UBOX
AAA_19
RRM_1
AAA_22
ResIII
zf-C3HC4_2
nSTAND3
HA2_N
RRM_9
zf-C3HC4_4
zf-C3HC4
ABC_tran
AAA_29
SLFN-g3_helicase
Arc_MA
Helicase_RecD
AAA_30
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
123068937
NCBI-ProteinID:
XP_044347568
LinkDB
All DBs
Position
3B:complement(123434658..123444863)
Genome browser
AA seq
1626 aa
AA seq
DB search
MRPSQDRRPFRPPDRFSPPPHLHRQPPPHARQFAVILLRAGPSFSSPPATEVDALVAGLQ
SPPPDNLSVCSAGRQAARLLFRSLPAAAAAARELWSLRLDGLHLLTPYLPDAALASHAFP
LVASLFASHASRLLDSGLVSRSAARSAELAVSIQSVKRRLRGHNNFRDFDQFNLQKKTLE
AEKELVDAKIAEYKAAMSSIRRAMLRGTDDEEEVEEEGVDVFGIGEGEDVDFVRLHMMMM
RECRRLNEGLPIYSYRRKILNHIFNNQVMILIGETGSGKSTQLVQFLADSGLSGNDSVVC
TQPRKIAALSLAHRVDEESKGCYADNFVSSYSSFLNYQNFSSKIIFCTDSCLLHHCMNDA
DLNGISYIIVDEAHERSLNTDLLLALIKQKLLDRLNLRLIIMSATADANRLAEYFYGCQT
FHVKGRNFPVEIKYVPDVSVDASFNIVPNSLCGPCAAASYVNDVIRQVSIIHKNEEEGAI
LAFLTSQLEVEWACENFTDASAVVLPMHGKLSPVEQSRVFKSYSGMRKIIFCTNIAETSL
TIKEVKYVVDSGLVKDSRFVPSSGLNVLKVNWISQSSANQRAGRAGRTGVGKCYRLYSEA
DFSMMELHQEPEIQKVHLGTAVLRILALGVKDARNFEFVDAPNPEAINMAVKNLEQLGAV
KCNCNCYELTDTGRHLVKLGIEPRLGKIMLDCFGFGLRKEGVVLAAVMANSSSIFCRVGT
DEEKHKADLQKVRLCHQDGDLFTLLAVYKKWEDGHENRNMWCWQNSINAKTMRRCQETIS
ELENCLKHELKIIIPSYWCWNPEAPSEHDKLLKRIILSSLAGNLAMFLGHERFGYQVIST
DQIVNLHPSCSLLNYGTKPDWVVFSEILSVPNQYLVCVTAVDHDALYAIHPMSSIQQLEK
HKLQIKVISGLGNNLLGKFVGKSGQNQQKIISRLKEDCRDDRVTVEVNFNNNEVVLFATA
QHMEKVFCIVNNALECEGKLMRNECLERSLFPERSGSSPIALFGSGAEVKHLELGKRYLT
VEVLHQNASDINDKELISLVDSLVSGVANFHKSSGNFRLGSGETKWGKITFLKPENAEDA
VSKLNGVEFYGSSLKIVPVCSPDNQGLRFPSVRAKLCWPRKESRGLALVTCASGEAQSVV
DDCFALGIDGRYISCRVSKKEENCVFVERIPLHVSELELYDAFRSTTTRRILNIRLLRVK
EATIASPSVSVCEEALIREISPFMPNKSFPGKSFRVEVFPPEENDSMMRATLTFDGNLHR
EAARALDHLEGSILPCCQPWQIIQCKHVFHSTMSCSVRVYNVISQEVTSLLESFRSQKGV
SYNYEKTENGIFRVKLTANATKTIADLRRPLEILMKGKTINHPDLTLSAVQMLLSRDGVA
HLKSIEQETGTYILYDRQSLNIKVFGHQHHMAEAEAKLVHALPQLLEKRPLEICLRGHNL
PPDLMKKTVENFGVDLEGFKTVTPSVKVELHKHRHILKVWGSKEDKRRVEGMISELITSV
KHNVPVHLPSENFGGGKEDNQRVADNELSMDACPICLCETEDPFKLESCGHIFCRACLVD
QCEVATKSHDGFPVCCLKTGCKKPFLIVDLKHLVSNEKLEDLFRASLRAFVASRAGIYRF
CPTPDC
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgtctcaggaccgccgccccttccgcccgccggaccggttctcgccgcctccc
cacctccaccgccagccgccccctcacgcgcggcagttcgcggtgatcctcctccgcgcg
ggccccagcttctcctccccgccggccacggaggtcgacgccctcgtcgcgggcctccag
tcgccgccccccgacaacctctccgtctgctccgccggccgccaggccgcccgactcctc
ttccgctccctccccgccgccgcggccgccgcgcgcgagctctggtcgctccgcctcgac
ggcctccacctcctcaccccgtacctccccgacgccgccctcgcctcccacgccttcccc
ctcgtcgcctccctcttcgcctcccacgcgtcccgcctcctcgactccggcctcgtctcc
cgctccgccgcccgctccgctgagcttgcggtctccatccagtctgttaaacgccgcctt
cgcggtcacaataacttccgcgacttcgatcagttcaatctccagaagaaaacattggag
gctgagaaggaattggtagatgccaaaattgccgagtacaaagcagcgatgagttcgata
aggcgtgccatgttacgtgggacggatgacgaggaggaggtggaggaggaaggggtggat
gtgtttgggattggggaaggagaggatgtggactttgtgaggttgcacatgatgatgatg
cgcgagtgcaggaggctcaacgaggggctaccaatctactcataccgcagaaagattctc
aatcacattttcaataaccaggttatgatcttaatcggggaaactggttctgggaaaagc
acacaactagttcagtttcttgctgactcaggtctttctggtaatgattcagttgtctgt
acgcaacctcggaaaattgctgctttatcattggcacatagagtcgatgaagaaagcaag
ggctgctatgcggacaattttgtgtcgtcatattcaagctttttgaattatcaaaacttc
agttcgaagattatattttgcacagatagttgtcttctacatcactgtatgaacgatgcg
gacctgaatggcatttcctatatcattgttgatgaagctcatgaaagaagtttgaacacc
gatcttctcttagctttgatcaagcagaagctgcttgataggttgaatttgcgactcatt
ataatgtctgccactgctgatgctaatagacttgctgaatacttttatggctgccaaaca
ttccatgtgaaagggagaaattttcctgttgaaattaaatatgtacctgatgtatcagtt
gatgcttctttcaatattgtgccaaactctttgtgtggtccttgtgctgctgcttcttat
gtcaatgatgttataagacaggtaagcatcatccacaagaatgaagaagagggtgccatc
cttgctttcttgacatcccagctagaagttgaatgggcttgtgaaaatttcaccgatgca
agtgcggtggtacttcctatgcatggaaagctttcccctgtggaacagagtcgtgttttc
aaaagttattctggaatgagaaaaattatcttctgcaccaatatagctgaaacatcactt
actataaaagaagtgaagtatgttgttgattctggactggtcaaggacagcagatttgtg
cctagcagtggtcttaatgttctgaaagtcaattggatttcccaaagttcagctaatcaa
cgcgctggccgggcaggtcgaacgggagtggggaagtgttatagactttactccgaagcc
gacttcagtatgatggaactgcatcaagaacctgaaatccaaaaagttcatcttggcact
gctgttctaagaatacttgctttgggtgttaaagatgcacggaattttgagtttgttgac
gccccgaatccagaagcgatcaatatggctgtgaagaaccttgaacagttgggtgctgtc
aaatgtaattgtaattgctatgagctgactgataccggacgccacttggtcaaattggga
attgagccaaggcttggaaaaattatgcttgattgctttggttttggtttgaggaaggaa
ggtgtagttttagctgcagttatggcaaattctagcagcatcttttgtagagtgggcact
gatgaggagaaacacaaagctgaccttcagaaagtccgtttgtgtcaccaagatggagat
ctgttcactctactcgctgtttataagaaatgggaggacgggcatgaaaacaggaacatg
tggtgttggcagaacagcatcaacgccaaaaccatgaggaggtgccaggaaactatatca
gaacttgaaaattgtctaaagcatgagttgaaaattataatcccaagttattggtgttgg
aatcctgaggctcccagtgagcatgataagttgctaaaaagaattatcctgtcatctctt
gcaggtaatcttgctatgtttttaggacatgaaaggtttggttaccaggtgatttcgaca
gatcagattgtgaaccttcatccctcatgctcattgctcaattatggtaccaagccagat
tgggtggtgttttcagaaatcttatccgtcccaaatcaatatctggtatgcgtaactgct
gttgatcatgatgctttgtatgcaattcacccaatgtcttccattcagcaactggagaaa
cataaattgcagataaaggtgattagtgggcttggtaataacttgctgggaaaatttgtt
ggcaaatctggccaaaatcagcagaagatcatctcacgtctcaaggaagattgcagggat
gaccgagtaactgtcgaagttaactttaacaataacgaagttgtgttatttgctaccgca
cagcacatggaaaaggtcttttgcattgttaacaatgctttggaatgtgaaggtaagttg
atgaggaacgagtgccttgagagaagtttatttcccgagaggtcaggcagttctcctatt
gcactatttggctcaggtgcggaagtcaaacatttagaacttgggaagagatatctgaca
gtagaggttctacatcaaaatgcaagtgacatcaatgacaaggagcttattagcttggtg
gatagtcttgtttccggtgttgctaattttcataaatccagtggaaatttccggctaggc
tcaggtgaaactaaatgggggaagattacattcctcaaacctgaaaatgctgaagatgct
gtctcaaaattgaacggggtagaattttatggttcctctctaaaaatagttcctgtatgt
tctcctgataatcaaggtttacgatttccttcagtaagagctaaattatgttggccacgt
aaggaaagcaggggccttgcacttgtaacatgtgccagtggggaagctcaatctgttgta
gatgactgctttgccttaggaatcgatggaaggtatatcagttgtagggttagtaagaag
gaggagaactgtgtatttgtcgaaagaattccattgcatgtatcggagctggaactatat
gatgcttttcgcagcacaacaacaaggagaatccttaatatccgtctgctcagggtcaag
gaagccactatagctagcccctctgtttctgtatgcgaagaagcgctgattagagaaatt
tctccattcatgccaaacaagagttttcctggaaaaagtttccgtgttgaagtgttccct
cccgaggaaaatgactcgatgatgagagcaactttaacttttgatggaaatcttcatcga
gaagctgcaagagcactggaccatcttgaaggaagtattcttccttgttgtcaaccttgg
cagataatacagtgcaagcatgtatttcatagcactatgtcctgttcagtgcgtgtttac
aatgttatcagccaggaagtgacttctctgcttgagagcttccgaagccaaaaaggtgtg
tcttacaattatgagaagaccgagaatggtattttccgagtaaagctcactgcaaatgcc
acaaaaacaatagcagatctgagaaggccgcttgagattttgatgaaagggaaaaccata
aaccaccctgatctgacattaagtgcagttcagatgctcttatcccgtgatggcgtagcc
catttgaaatcaattgaacaagaaactggtacttacattttgtatgacaggcaaagtcta
aatattaaagtctttggacaccaacatcacatggctgaagcggaagcgaaattggtccat
gcacttccacagctccttgagaagcggcctcttgaaatttgtcttcgtgggcataacctc
cctccagacttgatgaagaaaacagtagaaaattttggagttgatctggaaggattcaag
actgtgacgccctcggtaaaggttgagttacataaacaccgccatatacttaaagtttgg
ggcagtaaagaggataagcgaagggtggaggggatgatctctgagctgataacctcagtt
aaacacaatgtcccggttcaccttccgtcagagaattttggaggcggtaaagaagataat
caaagggtggctgacaatgagctttcaatggatgcatgccctatttgcttgtgtgagacg
gaagatccttttaagcttgaatcgtgtgggcacatattttgtcgggcttgcttggtggat
cagtgtgaagttgccacaaaatcgcatgatgggttccctgtttgttgcctcaaaactggg
tgcaagaagccattcctcattgttgatctgaagcacctcgtgtcaaatgagaagctggag
gacctattcagagcttccttaagggcatttgttgcatctagggcaggaatataccgtttc
tgcccaacaccggattgctga
DBGET
integrated database retrieval system
