Triticum aestivum (bread wheat): 123068972
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Entry
123068972 CDS
T07757
Name
(RefSeq) uncharacterized protein LOC123068972 isoform X1
KO
K19026
spatacsin
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123068972
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123068972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
123068972
NCBI-ProteinID:
XP_044347616
UniProt:
A0A3B6FLD8
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All DBs
Position
3B:complement(129295620..129315906)
Genome browser
AA seq
3106 aa
AA seq
DB search
MPISYEMEGGPTVLQLYKWKSLHPCLELSKFREAFISPTRRLFGLLSEHGDLVLSTVNVQ
PSQVESPMALSYSSLPVFERFSSIPRVKSLAWGHCCDASSQLEVPAFSEFLVLSSDDSIT
VHAFCHSEKSAVTVNCDTEELHGEWKEWFPTKCSASEDGESGARNCFRSFLTTISASVCN
GKYQARFPLKSSLPHSAEVVSFSIYDITMSFLKFWLSSCAMKTRMETDSGSPEDVPSHVP
VAEESCSCQWECLKVLPSSSGYLTGLVLTPNESVNCEVHQRNAKDILVAILELNHWGIQW
NFVVDLQTAYDDVGPNPQWVDFQLSDIFLASLNAVGFVAIWNAKTGHPISSFSVLDRCRI
DLEMPLPTVTNVGENTCVGNVVGRMFKMLVLAPHSPLVAAVDEVGVVYVFYADDILNFKA
NAHEKFDQPSINHYGDNFAAWETAGHEIGSQTFCSHQPIRQGSLNRDEMVYDFSDRDNAG
VVRARKRRKYCKCNENQVDSWPSGFSTTSQMKDVVTYPSTMAASAHVRRVVLPSCRLQEN
VISLSPFGLTRIFRSCNAEGNKHVKIIHTKLLMASCSLDERDIDAGFLGRSLPYQKEFSF
AGESAVCSFQGYLYLISQDNLSVVLPSVSVSSFSSRIDATQFWQPGFNGGSACNALNLLS
VNRLRTRLEAWQIEVLDKALLYEGPSLADRLCWENGWDMKISRLRWVQLSLHYTNISDLE
QSLNMLAEVDLAEEGVLQLLLASVYRLLCSTRSDHEAAVSSKLMVLAVRFATRTIKAYGL
LKQKKDMPDNSVKLHEMAFLLGVIRSIQGRITAKNQNSIRMQGDDKNSLKIGKEVLQNDS
PSPVVVVDGLDAPDRQGSTSTAFEFVPGSNRLLALAPVESSLTASHDNDTDQRTTQVGRP
VTQGNIKDMMNRWEMNKFDLKTIVGEALQSGRLPLAVLQLQLLRQRESCSGDDFDDVFSE
VHEIGRSIVYDLLMKGESGLAVATLERLGDDIESDLRQLMQGTVRRSLRLQIAEEMKQRG
YMRSNEWKMLETLALIERFYPSSSFWDTYLGRENVIHGAVNIVTLPGEDKPVLALHIRNH
PAIECGDVDGAVLGSWVNVNDYADLKEFSQSNLSDGYWACAAVWSDAWDQRTVDRIILDQ
PCHISAQSDLPWESQFEYFVAHDDVGEVCKLLDMIPDSVLLEGILSINVDNSRAGYSIVS
DVSVPDYKMYICDSEELEPVCMEVPHVKVFRSLSNHESTSWMRMLMQEQLAKKHIFMKEY
WQSTTEIIPLLARAGILTNTAKIGPKKEASMPLIASEMPDDERHQACERALHKLVIRFCV
QHDSPYLLDLYLDNCNLILGEDSIPLLKEAAGDCKWAQWLLFSRVKGYEYEASFSNARWN
LSQKMVNHGNLTAIEIDEILYTVDDMAERIGEMSALATLMYASPPIQKSICTGSVNRNRG
LSSQCTLENLGHCLQQFPTLWKTLRSTCFGQDGYGCLNYSPNNVSGKSAMSDYLCWRYSI
FSSAGGDTSLLQMLPCWFPKSIRRLIQLFEQGPFGMQLLSSAPSSEELFTHGVTDYIYNT
TGYSETNALSLEASIQKSVEEELYSSLEEKDLRVEHHLHRGRALAAFRHLLGKRASQLKS
ANARQVISTQSDVQADVQLILAPLSQTERSVLLSVAPLAITNFEDSTLVASCTFLLELCG
MCANMLRLDIAALQRISSYYNLAQQNKQSELSSPRSTGLHVLSHGADIAPALARALAEDY
VQSDHLQILEQKQTSRGPKREQPSQPLIAILEHLERASLPLLDEGRTCGFWLLSGIGDAS
LYRSQQNEASQHWNLVTEFCLAHHLPLSTKYLALLANDNDWVGFLTEAQRAGFPIEVVIG
VASKEIKDARLRTHILTVLKNTLSNRRKSSSNIPSGSRDPSFLSVDGDNPMELFCILAVC
EKQKNPGEALLNKAKQMQWSLLALIASCFPDVTLLSCLSVWLEITAARELSLIKVDGISS
KVAKNVGSAVEVTNKLPSVSRNVEYRYNRKNPKRRRFLEASPDSFKSGFSLDIPSGANGT
ATSNPSNIEAQQERRKPTSEETEIPVDIDERLASLSSIVAVLCEQQLFLPLLRSFDLFLP
SCSLLPFIRSLQAFCQMRLSEASAHLTSFSARIKDEASQSNSFKEASSITGWVVATAVKA
ADAVLSTCPSLYEKRCLLQLLAAVDFADGGSSSAYFGRSYWKINLAEPSLCKDGDIYKWN
DSMDDASLLAALEKDGRWEDARTWARQLESSDIAWESTFDHVTESQAEAMVAEWKEFLWD
IPQERAALWGHCQSLFMRYSLPPLQAGLFFLKHAEALGKEIPARELHEILLLSLQWLTGT
ITKSSPVYPLHLLREIETRVWLLAVESETHSKADGESSVVSQSLAIGNSTSIIEQTADVI
TKIDSSMSLPSMKAAEKNGTRDNNLSHHLHLQLFEYNSEATTTTNNARAKRRGKTNLPLR
RGVTDNVESSTNDSDDNSKVFFRSKIGEQARKLLSEEEFAKMEASLSGWEQHVRPADMEK
AVLSLLEFGQITAAKQLQQKLSPSYVPEELVLVDVALRVANNGGDGEINLLSFDTEALSI
LQSLQIASGSNMIDPSQAMEKLAVKCGEGRGRALIRRIIAVVQTAKILGLPFSEAFEKQP
IELLQLLSLKAQDSFDEAKFLVETHIMPASSIARILADSFLKGLLAAHRGGYLDSQKEEG
PAPLLWRSSDFLKWAKLCPSEPEIGHALMRLVMTGHEVPHACEVELLILSHHFYMSSSCL
DGVDVLVTFAANRVDSYVSEGDFSCLARLITGVSNFHSLSFILSILIENGQLELLLQKYS
STDTATVAPASVRGFRLAVITSLKHFNPNDDEALSLVYKHFDMKHEAASLLESRAEQYME
SWLDRHDKERRNDELLKAMHNLVQTAEILSTIDAGQRTHRACARASLLSLQIRIPDLVWI
GLTETNARRIFVDQSRFQEALIVAEAYSINQPMEWAPVFWNQMLKPDLIELFVAEFVLVL
PLHPPMLVELARFYRAEVAARGDQSHFSVWLSPGGLPAEWGKHLGRSFRSLLRRTRDMRL
RLQLATLATGFSDVLEGCNAVLDKVPENAGPLILRKGHGGAYLPLM
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atgcccatatcttatgagatggagggtgggcctactgtactgcagttatataaatggaaa
agcttgcatccctgtcttgaactatcgaaattccgggaagcgttcatttctcctacaagg
cgcctgtttggactgctctcggaacatggcgatcttgttctgtcaactgtcaatgtccaa
ccatcacaagttgaatcacctatggctctctcatatagtagcttgccagtgtttgagcgt
ttttcttctattcccagagtgaagtctttagcatgggggcactgctgtgatgcttctagt
caacttgaggttccggctttcagtgaatttcttgttttgtctagtgatgattctatcaca
gttcatgcgttttgtcattctgagaaaagtgcagtaacagtcaattgtgatactgaagag
ctgcatggggagtggaaagaatggtttcctaccaagtgctcagcgtctgaggatggcgag
tcgggtgcaaggaactgctttcgctcttttctgactacaatcagtgcatctgtttgcaac
ggaaaataccaagccagatttcctctgaagtcttcattacctcattctgcagaggtggta
tcatttagcatatatgatattactatgtcctttctgaaattctggttaagcagttgtgct
atgaagactaggatggaaactgacagtggatctcctgaagatgttccaagtcatgtacct
gtagctgaagaatcatgcagttgccagtgggaatgtttaaaagttttgcctagctcttcc
ggttatttgactggtttagtcttaactcctaatgaatcagtaaattgcgaggtccatcaa
cgcaacgccaaagatattttggtggctatccttgagctaaaccattggggtatacagtgg
aactttgtggtagaccttcagactgcatatgatgatgtggggcctaatccacagtgggtc
gatttccaactgtcagatatatttcttgcctcccttaatgcagtgggttttgtcgccatt
tggaatgcaaaaactggtcaccctatcagctcgtttagtgttcttgatcggtgcagaata
gatctggagatgcctttgcccactgtaacaaatgtaggagaaaacacctgtgttgggaat
gtcgttggcagaatgttcaagatgttagttttggcaccacattctccacttgttgctgct
gtagatgaggttggggtagtctatgtgttctatgctgacgatatcttaaatttcaaagcc
aatgcacatgaaaagtttgaccagccttctataaatcattatggcgataattttgctgcc
tgggaaactgctggtcatgagatcgggagtcaaacattttgcagtcatcagccaattaga
caagggtcacttaatcgagacgaaatggtatatgatttttcagatagagacaatgctggt
gtcgtcagagctaggaaaagaagaaaatactgtaaatgtaatgaaaatcaagtggatagc
tggccaagtggtttcagtactacatcacaaatgaaagatgtggtaacttatccttccaca
atggcagcttctgctcatgtgcgaagagtagtccttccttcatgcagattacaggagaat
gtaataagcctctcaccatttggactgacaaggatctttagaagttgcaatgcagaggga
aataaacatgtcaaaattattcacacaaagttgcttatggcttcatgttcacttgacgag
agagatattgatgctggttttctgggcaggagcctcccatatcagaaggaattttctttt
gctggcgaatctgctgtttgctcctttcagggatatttgtatttgatttcgcaggataac
ctttctgtggtccttccatcagtgtctgtatcgtctttttcatctcgtatcgatgccact
caattttggcaaccaggttttaatggtggtagtgcatgcaatgctctgaatttgttgtca
gtaaatagactccgaacaagattggaggcctggcaaatagaggttttggataaagcattg
ttgtatgaaggaccttcattagcagacaggctctgctgggagaatggatgggacatgaaa
atctccaggctgcgctgggtgcaattgtcattgcattacacaaatatcagtgatctggag
caatcgttgaatatgctcgcggaggttgatcttgcagaagaaggtgttttgcaactgcta
ttggcatctgtttatcggctattatgtagcacaagaagtgatcatgaggctgcagtgtca
tctaagttaatggttttagcagtccgctttgcaacgagaacaatcaaggcttatgggctt
cttaagcaaaagaaagacatgccagacaattcagtaaagcttcatgaaatggctttcctt
ttgggagtaattagaagtatccagggccgaatcaccgcaaagaaccagaattcaatccgg
atgcaaggagatgataaaaactcactgaaaataggcaaagaagtactacaaaatgattct
ccatccccagttgtggtagtggatggtttagatgctcctgacagacaaggatcaacatct
actgcatttgagtttgttcctggtagtaacaggctgttagcattagcgccagttgaatcc
tcccttactgcttctcatgacaatgacactgatcaaagaaccactcaagttggaagaccg
gttactcaaggaaatatcaaggatatgatgaaccgttgggaaatgaataagtttgacttg
aaaacaatagtcggtgaagcactacaatctggtcgactaccgttggcagttcttcagctg
caactgttgcgccagagggaatcatgttctggtgatgattttgatgacgttttctccgaa
gttcatgaaataggaagatccattgtttatgatctgttaatgaagggtgaaagtggactg
gctgtagcgacactagaaagactaggagatgacatagagtcagaccttagacaacttatg
caaggtactgtcagaaggtcacttaggctacaaatagccgaggagatgaaacagcgtggg
tacatgcgatcaaatgagtggaagatgttggagaccttagcactgattgagcgtttttac
ccaagcagcagcttctgggacacatatcttggcagggagaacgttattcatggtgctgta
aatattgttacacttccaggggaagataaaccagtgcttgctctccatattcgtaaccac
cctgctattgaatgtggtgatgttgatggagctgtgcttggttcttgggtgaacgttaat
gattacgctgatttaaaggagttctctcaaagcaacctttccgatggatattgggcatgt
gctgctgtgtggtctgatgcttgggatcaaagaactgtggaccgcataatactggatcag
ccttgtcatatttctgctcaatcggacctcccatgggaatctcagtttgaatattttgtt
gctcatgatgatgtgggggaagtctgcaaactcttggacatgattcctgacagtgtactt
ctagaagggatacttagcattaatgtggacaattcacgagctggttacagcattgtgtct
gacgtcagtgtccctgattataaaatgtatatatgtgactcagaggagctagagcctgtt
tgtatggaagtaccacatgtcaaagtattcagatccttgtctaatcatgaatcaacatca
tggatgagaatgctaatgcaggaacaactggcaaagaaacacatctttatgaaagagtac
tggcaaagtactaccgaaattatacctttacttgctcgagctggcatacttactaataca
gccaagataggccccaagaaagaagcttctatgccattaattgcttcagagatgccagat
gatgaacgtcaccaggcttgtgaaagagcattgcataaactagtcatccgtttttgtgtg
caacatgactctccatacctactcgatctctatttggacaactgcaatttgattctcggg
gaggactctattcctttgctcaaagaagctgcaggtgattgcaagtgggcacaatggtta
ctcttctccagagtcaaaggttatgagtatgaggcatccttttctaacgcccgttggaat
ctgtcacagaaaatggttaatcatggcaatctaactgcaattgagatagatgagatatta
tatactgttgatgatatggctgaacggattggggaaatgtctgcactagctaccttaatg
tatgcttcaccaccaattcaaaagtccatatgcactggtagtgtgaacagaaatcgtgga
ttgtcttctcagtgcacattagagaacctaggtcattgtctccagcaatttccaacccta
tggaagacacttcgttccacctgttttggacaagatgggtatggctgtctaaattattct
ccaaataatgtttctggaaaatccgcaatgtcagattacttgtgctggcgctatagcatt
ttttcctctgctggaggagacacttcattgttgcaaatgctcccgtgttggtttccaaag
tctattagaagattaatccaactatttgaacagggcccttttgggatgcaactgctatcg
agtgcaccgtcatctgaagagttatttactcatggtgtcactgattacatatacaatacc
actggatatagtgaaaccaatgcgttgtccttagaagcatccattcaaaaaagtgttgaa
gaagaactatattcttcccttgaggagaaagacttgagggtagagcatcatttgcaccgt
ggtcgcgcactagcagctttcaggcatcttcttggtaaaagagcttcgcaattaaaatca
gccaatgcgcgccaagtgatctccacacagtctgatgttcaagcagatgtacaactgatc
ctagcccctttaagtcaaactgaacgatcagttcttctatcggtggctccactagctatc
acaaacttcgaggactccacactggttgcttcctgcacattcctgttggaactatgtggc
atgtgtgctaacatgctccgtctagatattgctgctcttcagcgcatctcttcctactat
aacttggctcagcaaaataaacaaagtgagctatcttcaccaaggagcactgggttacat
gtgctctcccatggagctgatattgctcctgctcttgctcgagcattagctgaagattat
gtccagtctgatcatcttcagattttagagcagaagcaaacctcgaggggtcctaaaagg
gaacaaccatcacagcctcttattgctatactggagcacctggaacgagcaagtttgcca
ttattagatgaaggtagaacctgtggattttggcttttgagtggcattggtgatgcatct
ctttaccggtcgcagcaaaatgaagccagccaacattggaatttggttacagaattctgt
ctagcgcaccatctcccattaagtacaaaatatctggctttactggccaatgacaatgat
tgggttggttttctaacagaagcccagagagctggttttccaattgaagttgttatcgga
gtggcttccaaagagataaaggacgcaagattgaggactcatatactaacagttctgaaa
aacacgttatcaaatagaaggaaatcgtctagcaatataccctcgggtagtagggaccca
tcctttttgtctgttgatggcgacaaccccatggaacttttctgcatacttgctgtttgt
gaaaagcaaaagaaccctggggaggcacttctgaataaagcaaaacaaatgcagtggtct
ttattggcgttgattgcttcatgctttccagatgtaactcttctctcatgcttaagcgtt
tggcttgagattacagctgcaagggagttgtccttaatcaaggtggatggtatttcctct
aaagtagctaagaatgttggatctgctgttgaggtcacaaataagttgccaagcgtgagt
aggaatgttgaatatcgttacaacaggaagaatccaaagcgaagacggttcttggaggcc
tctccagatagcttcaaatcaggtttttcgctggacattccaagtggggcaaatggtact
gcaacttccaatccttccaatattgaggctcagcaggaaagaagaaagcccacctccgaa
gagactgaaattccagttgatattgatgagaggcttgcatctttatcaagtatagtagca
gtgctgtgtgaacaacagctgttcctaccattacttcgatcctttgacttgtttctacca
tcctgctcccttctccccttcatccgttctcttcaggcgttttgtcaaatgcgcttgtcc
gaggcctctgcacatttgacatcattttcagcaaggataaaagatgaagcctctcaatca
aactcgttcaaagaagcatcatcaataacaggatgggtagttgctacagctgtaaaagcc
gcagatgcagtactctcaacctgcccatcactttatgagaagaggtgtttgctacagctc
cttgcagcggttgattttgcagatggtggttcttcgtcagcttacttcggccgcagttat
tggaaaatcaatctggctgagccgtccttatgcaaagatggtgatatctacaagtggaac
gattccatggatgatgcttctctcctggcagcattagagaaggatggacgatgggaggac
gctcgtacttgggcaaggcaactggagtcgagtgatatagcttgggaatctacttttgat
catgtgacggaatcacaggcagaagctatggttgccgaatggaaggagtttctctgggat
attccacaagaacgtgcagctttgtggggccactgtcagtcgcttttcatgagatattct
ttgccacctttacaggctggattatttttccttaagcatgctgaagcattagggaaagag
ataccagcacgagagctccatgaaatacttttgctatctttacaatggcttactggaact
attactaaatcctctccggtatatcctcttcatcttctccgggaaattgagactcgggtt
tggctcctggcagttgagtcagagactcactctaaggctgatggcgaatcttctgttgtt
tctcagagtctagctattggaaacagtaccagtattatagaacagactgctgatgtcatc
acaaaaatagacagtagtatgagtttgccaagcatgaaagctgcagaaaaaaatggtaca
agggacaataacttatcacaccatctacatttgcaactatttgaatataacagtgaagca
acaacaacaacaaataatgcaagagcaaagcgaaggggcaaaacaaatctaccacttaga
cgaggtgtcactgataatgttgaaagtagcaccaatgattctgatgataattctaaagtt
ttctttcgttctaagattggcgaacaagcaagaaaattactatctgaagaggaatttgca
aagatggaagcgtctctgtctggttgggagcaacatgtcaggcctgcagatatggagaag
gctgtgctctccttattagaatttgggcaaataactgcagctaagcaactccaacaaaag
ttatctccatcatatgttcctgaagaacttgtcctcgttgatgttgcgttaagagttgca
aataacggcggtgatggagagatcaatttattatcctttgatacagaagccctttcaata
cttcaatctctccagattgcaagtggcagcaatatgattgatccatcacaggctatggag
aaattagccgtgaaatgtggcgaggggcgcggacgggctcttattaggagaataatagcg
gttgtgcaaactgcaaaaatactgggactcccattttctgaagcatttgagaaacagcca
attgaacttctgcagttgctttcactgaaagctcaggattcttttgatgaagctaaattt
ctggtggagacacacatcatgcctgcatctagcattgcaagaattcttgctgattccttt
ctgaagggacttttagctgcacatcgtggaggttatctggactcccaaaaagaagaaggc
cctgcaccactattgtggagatcaagtgacttcttgaagtgggcaaaactatgcccatca
gaaccagaaattggtcacgctttaatgcgtttggtaatgactgggcatgaagtaccgcat
gcttgtgaggttgaactccttatactgtcacatcacttctacatgtcatcttcttgtctt
gatggtgtggatgttctcgtcacatttgcagctaatagagtggattcatatgtttcagag
ggggatttttcctgcttagctcgcttgataactggagtgagcaattttcactccttgagc
ttcatcctttccatccttatagaaaatggccaattggagttgctacttcaaaagtattct
tccactgacacagccacagtggcacctgcatcagttcgagggtttaggttggctgttatt
acatcactgaaacatttcaacccaaatgatgatgaggctctgtctctggtatacaagcac
ttcgacatgaaacatgaggcggcttccctccttgagtcgcgtgcagagcagtacatggaa
agctggttagatcggcatgataaggaacgacggaatgatgagctccttaaggctatgcat
aaccttgtacagacggctgagattctttcaacaattgacgctggccaaaggacacatcgt
gcttgcgctcgtgcttctctcctatctcttcagatccgaatacctgatcttgtatggatt
ggtcttacagaaaccaacgcacgccgtatttttgtggatcaatctaggttccaggaggcc
ctcattgttgccgaagcatacagcataaatcagccaatggaatgggccccagtcttttgg
aaccagatgctgaaacctgacctcatcgagctatttgtggctgaatttgtactggttctg
cccctgcacccaccaatgctcgtggagcttgcgagattttaccgggcagaggttgcagcc
aggggcgaccagtcgcacttctcagtctggctttcgcctggaggcttgcctgcggagtgg
ggaaagcatctcggcagatcattcaggagcctgctgcgccgaacgagggatatgaggctg
aggctgcagttggcaactctggcgactgggttcagcgatgtccttgagggctgcaatgca
gttctggacaaggtccccgagaacgccgggccgctaatactgaggaagggccatgggggt
gcatacctccctctcatgtaa
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integrated database retrieval system
