Triticum aestivum (bread wheat): 123069570
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Entry
123069570 CDS
T07757
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123069570
09123 Folding, sorting and degradation
03018 RNA degradation
123069570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123069570
03041 Spliceosome [BR:
taes03041
]
123069570
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123069570
mRNA degradation factors
5'-3' decay
Lsm complex
123069570
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123069570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
123069570
NCBI-ProteinID:
XP_044348392
LinkDB
All DBs
Position
3B:complement(251704426..251710599)
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AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGRGRGRGDIGTKPGGRGIGRGQDDG
KGGGRGRGGIGSKGGNKGGRGRG
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctcgctcctcaagaccgcccaggggcatcccatgctcgtggagctcaaa
aacggcgagacctacaatgggcacttggtgaactgcgacacgtggatgaacatccacctc
cgggaggttatttgcacctccaaggatggtgataagttttggaggatgccggagtgctat
attcgtgggaacacaatcaagtatcttcgggttcctgatgaggtgattgacaaggttcaa
gaggaaacttctaagagtagatctgataggaagccaccaggtgttggccgcggaagagga
agaggagatataggcactaaacctgggggcagaggcatcggacgtggccaagatgatggc
aaaggcggtggccgcggaaggggcggaattggaagtaaaggtggcaacaaaggcggacgt
ggtcgtgggtaa
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