Triticum aestivum (bread wheat): 123070118
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Entry
123070118 CDS
T07757
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123070118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123070118
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123070118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123070118
NCBI-ProteinID:
XP_044349077
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Position
3B:412566924..412571582
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AA seq
1061 aa
AA seq
DB search
MPDPEDKDGAEDGHEEEDKEEEEEDKEEDEWEQEEEEESEESEEDSEEPEAEEEPGRRVL
SDARVAGRYTGPRPGGDGSGAEIFLKRKFEGWYITKMADTASPGGTVASRLRSKRRCPDA
KLLRQATRRKPYCVDTPSQSSSEAEEDDKDKPPPHPTRSSSDEGGRGHGRTGIRRPRRRG
QNADDDSDEDGRTAARRRRGQNAAHIDEDFEEPGGMAAARRREKQRMEEDDAAADGGDEA
DEQGASRRAKKEGAASCRQAAGRKSKDFPAEGWEQLGDVTFKKSSLVPPRRQDGRDQETY
DDLLYSIFEGIETTLQNASAPLDAPVPAQEQGGDPFPLVFSFGVVDEVVPEKTALDDLWA
QRDLALDLEAESNKVFSHTCHKDAESDEHEIPAHGGTFCKRGKHDLFHDDQIGVRCRKCD
YIEIEIRHVFPSMAKESTDREPAAEHDRLDMFVDDILKSVGYEGASNVGLGSDKTGVVWD
LIPGVREDMFPHQREGFEFMWRKLAGGIDIEQLRHTMNTDTTSGCVISHAPGTGKTRLAI
TFVQSYLEVFPHCRPVIIAPRGMLATWEQEFSKWNVKLPFHVLSSSEIQWDQDKTIQKLV
SKDHGLGQKLAMKKLSQKSKMMLKLASWYEGSSIIGLSYSLYRNLAKGEGKDGEMQRNLL
LEKPGLLVLDEGHTPRNKKSLIWKVLAEVSTEKRIILSGTPFQNNFLELYILCLVKPKFA
KDFACTRLSKKGVASTSQSRAAPYVEEDEGKEFWSSLRISNITDEHITEIREKLGPFVHI
HNGDILQKSLPGLRESVVILNPLPRQKEIIAMMEESAGKGFLDAEYKISLASIHPFLVTS
TKLSDTEASVVDKMKSVRLNPCEGVKTWFVFEIIRLCEALKERVLVFSQYLEPLALIMDQ
LTTELDWTEGKEILLMSGNVRVKQREALMESFNDMNSEAKVMLASTKACCEGITLVGASR
VVLLDVVWNPSVGRQAIGRAYRIGQEKIVYTYNLIAEGTKEKVKYDRQATKDHMSKLLFS
NEPQPTGSNLSPELISNDRILEKMAAREELKDMFVQILPSH
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgccggatccagaggataaggacggtgcagaggacgggcatgaggaagaagataaagag
gaggaagaggaagataaagaggaagatgaatgggagcaggaagaagaggaggaatcggag
gaatcggaagaagattccgaggaacctgaggcagaggaagaaccgggccgtcgcgtgctt
agcgatgccagggtcgccggtcggtacacggggccgcggccgggcggcgacggcagcggc
gcagagatcttcctcaagcggaagtttgaagggtggtacatcaccaagatggcagacacc
gcctctcccggcggcactgtcgcgtcgcggctgcggtcaaagcggagatgccccgacgcg
aagctgctccggcaagccacccgcagaaagccgtactgcgtcgacacgccctcgcagtcc
agctcggaggcagaggaggacgacaaagacaaaccaccgcctcatccaacgcggtcgtcc
agtgacgagggcgggcgcgggcatggcaggacggggataaggcgcccacggcgccgagga
caaaacgccgatgatgactctgatgaagacggcagaacggcggcgaggcggcgccgagga
caaaacgctgcccacatcgatgaagactttgaggaacccggtggaatggccgccgcaagg
agaagggagaagcagcgcatggaagaagatgatgctgctgctgacggcggcgatgaggct
gatgagcagggagcttcccggagggcaaagaaagaaggagcggcgtcctgccggcaggcg
gccggccgcaagagcaaggacttccccgcagagggatgggagcagctgggtgatgtcacc
ttcaagaagagctccctggttcctccgaggcggcaggacgggcgagaccaagagacttac
gacgatctgctctactccattttcgagggaatcgagaccactcttcagaacgcctctgct
cctctggacgcccctgttcctgctcaagaacagggaggcgatccgtttcctctggtgttc
tccttcggggttgtagatgaggtggtgccggagaagactgctctggacgacctgtgggca
caacgtgacttggccttggacttggaggccgaatccaacaaggttttttctcacacctgc
cacaaggacgcagagagcgatgagcatgaaattcctgcacatggagggactttttgcaag
cgagggaagcatgatctctttcatgatgatcaaatcggcgttcgatgtcgaaaatgcgat
tacatcgaaatcgaaattagacacgtatttccatccatggccaaggaatcaacggatagg
gagccagcagcggagcatgataggcttgacatgttcgttgatgacatcctgaaatcagtt
ggatacgaaggggcaagcaacgtgggactgggaagtgacaaaactggcgtcgtctgggat
ctcattcctggggtacgggaagacatgttcccacaccagcgggaagggtttgagttcatg
tggagaaaacttgcaggagggatcgacattgagcagctgaggcacaccatgaacactgac
accacaagtggctgtgtgatctctcatgccccggggaccggcaagaccaggctagcaatc
acattcgtgcagtcttacctggaggtcttcccgcactgcaggccagttatcattgccccc
aggggtatgctggctacatgggagcaggagttcagtaaatggaatgtcaagctcccattc
catgtcctcagttccagtgagatccagtgggatcaagacaagaccatccagaaactggtc
tccaaggatcatggtctgggccagaagctggccatgaagaaactgagccagaaatccaag
atgatgctgaagctggcatcatggtatgaagggagcagcatcatcggtctaagctattcg
ctctacaggaatcttgccaaaggcgaaggcaaggatggagaaatgcagaggaacctgctt
cttgagaagcccggcttgctggtcctcgacgaggggcacacaccaaggaacaagaagagc
ctcatttggaaagttctcgcagaggtcagcaccgaaaagcggataatcctgtcagggact
ccattccagaacaacttcctagagctatacatcttgtgcttggttaagcccaagtttgcc
aaagattttgcttgtacaagactcagcaagaaaggagttgcttccaccagccaatcaaga
gcagcgccttatgtggaggaggatgaaggcaaagaattctggagttcattaaggataagt
aacatcacggatgaacacatcactgaaatccgggaaaagctgggcccttttgtgcacatc
cataatggtgacattcttcagaagtctcttccaggattgagagaatctgttgtgatcctg
aaccctcttcctcgtcagaaggaaatcatcgcaatgatggaggaaagtgcagggaagggt
tttcttgacgcagaatacaagatatctcttgcgtccatacacccattcctcgtcacaagc
acaaaactgtcagacacagaagcctctgttgtggacaagatgaagagcgtgcggctgaac
ccatgcgaaggagtgaagacatggttcgttttcgagatcatccgtctttgcgaagcactg
aaagaaagagtgctggtgttcagtcagtaccttgaaccactggccctgatcatggaccag
cttaccacagagctagactggacagaaggcaaggagatcctactcatgagtggaaatgtg
cgtgttaaacagcgcgaagccttgatggaatccttcaacgacatgaacagtgaggctaag
gtgatgcttgcatcaaccaaggcctgctgtgaaggaataacactggtcggtgcatcgcgt
gtggttctccttgatgtcgtctggaatccttctgttggacggcaggcgattggccgagcc
tatagaatcggccaggagaagattgtgtacacatacaacctgattgcagaaggaacaaag
gagaaggtcaaatatgacagacaagctaccaaggatcacatgtccaaattactgttttca
aatgaaccgcaacctaccgggagcaatctgtcgccagaactgatatccaatgataggatt
ctggaaaaaatggctgcacgtgaagaactcaaagacatgtttgtgcagattctcccttcc
cattga
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integrated database retrieval system
