Triticum aestivum (bread wheat): 123070406
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Entry
123070406 CDS
T07757
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123070406
Transcription machinery [BR:
taes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123070406
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
123070406
NCBI-ProteinID:
XP_044349562
UniProt:
A0A3B5Y7P6
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Position
1A:588234117..588237053
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AA seq
570 aa
AA seq
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MGLPMARGPCCCSPSSSSSSSSPWMLQAQLPKNPHPPLSGRSVCSESLRVLALHLLLNRR
ANLSRRWGDITRTAASSSGLLQITGNMSGCSPKIKVDAERTSLDGALDRNAQFDMIYEDM
SSWMNGAHTSGNSLQYNLLMQNIHVLQSSLAAQDLVLLERDILVHIEQLGALKWFNASRS
GATITHTSHAPDFALPWNDTEFAPVTPLDEQSDDQLVIIRSGKSQERKLKRIRASEKVSV
VCVKASSQKPRKSRRSTSSQFISEWKNYPGRRRSIVREQSDLLVTIKECANLEKIRENMV
KEGQEVCYDKWAKAAGVDEAVLKSRLQAGYCCRERLLVTTEWLVKYIARTYTGMGTAFED
LLQAGKMGVLDGAERFDSQRGCKFSTYVKYWIRKPMLALLAENSGVIQLPARMDCIIRKV
REAKRAIRSSTGRNPIDAEIATFVGASVANVRLARKCSRRVVSLYMEVGAGQNAKFMDVT
PDTSLEDPEEAIFRRQLRERLLMVLDRLPAREGRVLKLRHGLEDGRCRSLEQIGGIYHVS
KEWIRKIEKSAMSKLRNEDVHGELKDFCGF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcccatggcgcgcggcccgtgctgctgctcgccgtcatcgtcgtcctcctcc
tcctcgccgtggatgctgcaggcccagctccccaagaacccccaccctccactgagtggg
aggtcagtttgctctgaatcgttgagagttctggccctgcatctcttgctcaatcggcgc
gctaatcttagccggcgctggggtgacatcaccagaactgctgcatcttcatccggtttg
cttcagataacagggaacatgtcaggctgctcaccaaaaataaaggtggatgccgaaaga
acatcccttgatggtgctcttgacaggaatgcgcagttcgacatgatctacgaggacatg
tcttcttggatgaatggggcacacacaagtggcaacagtttgcagtataacttgttgatg
caaaacatccatgtgttacagagtagtttggctgctcaagatttggtgttgctggagaga
gatatccttgtacatattgaacagcttggagctctgaaatggtttaacgcgtcgaggtcc
ggtgccaccataacacatacctcacatgcaccagattttgcactcccttggaatgatact
gaatttgctccggtgactcctctcgatgagcaaagcgatgatcaattggtgattattcga
agtgggaaaagccaagagaggaaattgaagagaattagagcatcagaaaaggtctctgtg
gtttgtgtaaaagcatcctcacaaaaaccaagaaaatcacgcaggtccaccagtagtcaa
tttatatctgagtggaaaaactatccaggccggcgaaggagcatagttcgggaacagtcg
gacttgctggtgactatcaaggaatgtgcaaaccttgagaagatcagggagaacatggtg
aaggaagggcaggaggtctgctatgataagtgggccaaagcagctggagttgatgaagcg
gtcctgaagagtagactgcaagcaggctactgctgcagagagaggttactggtgaccacc
gagtggcttgtcaagtacattgcaaggacatacaccggaatgggaacagctttcgaggat
ctactccaggctgggaaaatgggtgtccttgatggcgctgagaggttcgacagccagaga
ggatgcaaattctcaacctatgtgaagtactggataaggaaacccatgctagcgctcctt
gctgaaaattctggagtgatccagctccccgcaaggatggattgtatcatccgaaaggtc
agggaagctaagcgggcaattcgatccagcactgggaggaatccaatagacgcggagatc
gcgaccttcgttggcgcgtcggttgccaatgttagattggcgcggaagtgctcccgtcgt
gtcgtttcactctacatggaggtcggggccggacagaacgccaagttcatggacgtgacc
ccagacacatcactagaagatccagaggaggccatcttccggaggcagctgagggagagg
ctgctcatggttctggacaggctcccggcaagagaagggcgtgtgctgaagctgcggcac
ggcctcgaggatggcaggtgccggtccctggagcagatcggaggcatttaccacgtgtcc
aaggagtggatcaggaagattgagaagtcggccatgtccaagctcaggaacgaggacgtg
catggtgagctcaaggacttctgcggattctag
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