Triticum aestivum (bread wheat): 123070902
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Entry
123070902 CDS
T07757
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123070902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123070902
03012 Translation factors [BR:
taes03012
]
123070902
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123070902
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123070902
Translation factors [BR:
taes03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123070902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
OB_NTP_bind
R3H
HA2_N
Ank_2
AAA_19
Ank_5
AAA_22
nSTAND3
ATPase
Ank
AAA_16
ResIII
ABC_tran
AAA_23
Rad17
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
123070902
NCBI-ProteinID:
XP_044350247
LinkDB
All DBs
Position
3B:559051887..559063147
Genome browser
AA seq
1195 aa
AA seq
DB search
MGRKGPKGAKNAAALTKAALAAMSEETTVRITTLLEDFRASDAQVHTFEPSLTNQERAAV
HAMCKKMGMISKSKGYGERRCLSVYKTKNTQGAVKEEGPSKLGFSEEARQVLLDLFTHYP
PDDAELNGDAVKNPGDKAAKILWKTDTAFSRPAMQKHDIAKKVKMLTSKLNDTRQLRKIG
EGRSKLPIASFKDHISSTLENHQVVLISGETGCGKTTQVPQYILDHVWGKGESCKIICTQ
PRRISAMSVAERISVERGETVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRVLIGRVTNI
SKRQRAADDVIMGITHIIVDEIHERDRFSDFMLAILRDLLPIYPHLHLVLMSATIDAERF
SQYFNGCPVIQVPGHTYPVKTFYLEDVLSILQSVGDNHLNPETNDLGLDSVLTDDYKSSM
DEAISIALVSDEFDPLIELISIEQNPEIFNYQHSETGVTPLMVFARKGQLGDVCMLLSFG
VDCSARDHDGKSALDWAQQENQVEAYEVIKKHMDCSPAKLPEENELLKKYLATINPEHID
TVLIERLLRKICTDSNEGAILVFLPGWEDINQTRERLLASSFRDSSKFLVLSLHSMIPSS
EQKKVFKRAPAGVRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHTSWV
SRANARQREGRAGRCQPGTCYHLYSRFRAASLPEFQIPEIKRMPIEELCLQVKLLDPNSK
IADFLKKTLDPPVTETVKNAITVLQDLGALTQNEQLTDLGEKLGSLPVHPSTSKMLLFGI
LMNCLDPALTLACAADYRDPFVLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAFDCW
TCAKVKGQEALFCSKYFVASNTMNMLSSMRKQLHSELTQRGFLPADTSACSLNAKVPGII
SAVLVAGAYPMVGRLLPPRKNARRAVLETASGAKVRLHPHSSNFNLSFNKSSGNPLMVFD
EITRGDGGMYVKNCSVVGSYPLLLLATEIAVAPPDDVSDEDDEGSSGDEAGKSTLGQQKE
EIMSSPDNTVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGATM
YAIACILSYDGLPGNLATRHGSGQSSTDASGSAEGRKVGFIPPGGFLMSLLSDVPPNAPH
HQKSSNHPGGGSGHIRSSRAPAGRFNQSQQHPGRNSSGPGSSASQSFKRQRDAAR
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaaaggggcccaagggggccaagaacgccgccgccctcacgaaggccgccctg
gccgccatgagcgaggagacgaccgtccgcatcacgacgctgctcgaggacttccgcgcc
tcagatgcccaagtgcacacattcgaacctagtcttaccaatcaagagcgggcagcggtc
catgctatgtgtaaaaagatgggcatgatatcaaagagtaaagggtatggggaacgacga
tgcctttctgtttacaaaacaaaaaacacgcagggggctgttaaagaagaaggccctagc
aaacttggattttccgaagaagcaagacaggttttgctagatctgtttacacactatcct
cctgatgatgctgaattgaatggtgacgctgtcaagaatcctggcgataaggctgctaaa
attctatggaagacagatacggccttttccaggccagctatgcagaaacatgatatagca
aagaaggtcaagatgcttacgtctaaattaaatgataccagacagttgaggaagatcggt
gaaggcagatccaaacttcctattgcatcattcaaagatcacatttcttctaccctagaa
aatcaccaggtggttcttatttctggagaaacaggctgcggtaaaactacccaggttcca
caatatatcttagatcatgtgtggggcaagggtgaatcatgtaagatcatttgtactcaa
cctcggcggatatcagctatgtcagttgctgaacgaatttctgttgaaagaggagagact
gttggtgacacagttgggtacaagatacgtttggagtcgaagggagggaagaattcgtca
atcatgttctgcacaaatggtgttctcttgagggtgttgataggcagagtaactaacatt
tcaaagaggcaacgcgcggctgatgatgtaattatggggataacacacattattgtggat
gaaatccatgaaagggataggttttccgatttcatgctggctatcttgagagatttgctg
ccgatatatcctcatcttcatttggtgctcatgagtgcaacgattgatgctgagcggttt
tcacaatatttcaacggatgcccggttattcaagtcccaggccatacctatccggtcaaa
actttctatttggaggatgtgctttctattctgcaatctgtaggtgataatcatcttaat
cctgaaacaaatgatctgggacttgacagtgtgctaaccgatgattacaaaagctcaatg
gatgaagcaattagcatagctttagtcagtgatgaatttgatcctctcattgagcttatt
tctatagagcagaacccagaaatcttcaactaccaacattcagagactggtgtgacacct
ttgatggtttttgccaggaagggtcagcttggggatgtctgtatgcttctatcatttggt
gtggattgttctgcacgggatcatgatggaaaatctgcattagattgggcacagcaagag
aatcaggtagaggcttatgaagttattaagaaacatatggattgtagtcctgcaaaatta
cctgaagaaaacgagctgcttaagaaatacttggcaactatcaacccagaacacattgat
actgtgctgatagaacgcttgcttagaaaaatatgtactgactccaatgaaggagctatc
ttagtcttccttcctggttgggaagatataaatcaaacacgggagaggttacttgcttct
tcctttcgggattcttcaaaatttcttgtactgtcacttcattccatgatcccatcttca
gagcagaaaaaggttttcaaacgtgcaccggcaggggttcgtaaaattattctctcaacc
aacatagcggagactgcagtaacaattgatgatgttgtatttgttatagatagtgggagg
atgaaagagaaaagctatgatccatacaataatgtgtctacacttcatacttcttgggta
tctcgagctaatgcaagacagcgtgaaggacgtgccggtcgttgtcagccaggaacttgc
tatcatctttactctagatttcgagcagcctcattgccagaattccaaattcctgaaatt
aagaggatgcctattgaagagctgtgtttgcaggtcaaactgcttgatccaaactctaaa
atagcagacttcttaaagaagaccttggatcctccagttacagagactgtaaaaaatgct
attactgtgcttcaggatcttggtgctttaactcaaaatgaacaattgacagatttgggt
gaaaagttaggttctctcccggtccatccatccacaagcaagatgctcctgtttggtata
ttgatgaactgccttgatcctgcattgacattggcatgtgcagcagactatagagatcct
ttcgtccttcctatggctccggatgagagaaaaagggctgctgcagccaaggttgagctt
gcttcattatatggtggatatagtgaccagcttgctgttgtagcagcatttgattgttgg
acgtgtgccaaagtgaaaggacaagaagctttgttttgttcaaagtacttcgtagcttca
aacaccatgaatatgttgtctagtatgaggaaacaacttcacagtgaactaactcaaaga
ggatttcttcctgctgatacatctgcctgcagcttgaatgctaaagttccaggtatcatt
agtgctgtccttgtggctggcgcttacccaatggtaggaagattgctccctcctcgcaaa
aatgctagaagggcagttttggaaacagcaagtggtgccaaagttcgattacacccgcat
tcttccaactttaacttgtcatttaataaatcgtctgggaatccactaatggtatttgat
gaaatcactcgaggtgatggcggaatgtatgtaaagaactgttcagttgttggatcatat
cctttacttctgcttgctacagaaatagctgttgctccacctgatgatgtaagtgatgag
gatgatgaaggttccagtggggatgaagcgggaaaaagcactctgggacaacaaaaggaa
gagattatgtcttctcccgacaacactgtttcagttgttgttgatcggtggctccgattt
gatgctactgctctggatgttgctcaaatatactgcctacgagaacgcctagcatctgct
attcttttcaaagtgaaacatccacaggatgttctcccgcctgctcttggagcaacgatg
tatgcgattgcttgtatcctatcgtatgatggcttgcctggtaatttggcaacaagacat
ggttcaggtcagagctcaacagatgctagcggatcagctgagggaaggaaagttggtttt
attccgcctggcggtttccttatgtcattgctatcggacgtaccgcccaatgcacctcat
catcagaagtcatctaatcatccagggggtggttcagggcatattaggtcatcaagggcc
ccggctggtagatttaatcagtcgcagcagcatcctggccgcaacagctctggaccaggg
agttcagcatcacaatctttcaaaagacagcgggacgctgcacggtga
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