Triticum aestivum (bread wheat): 123071847
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Entry
123071847 CDS
T07757
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123071847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123071847
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123071847
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123071847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
123071847
NCBI-ProteinID:
XP_044351362
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All DBs
Position
3B:complement(699467240..699468642)
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AA seq
299 aa
AA seq
DB search
MFAVYPPPPPRFKFNRMFPVQAQLPPFAYHAAPLPPVQPQLAVQVRPVWAGSFNEEWAYL
QSFAACARYVAIDVHYPGLVHAAGQDLSSLTVEHRYALMKADVDGLKPLQVGIAVCDHLG
QQVAWEFNLRDFCRPADPHNDKALDYHAARGLDLDTLRNHGVDAYMLGALLMGSGLIGAG
HGRPLSWITHAGAYHVAYLLKIVTGGAPLPHDVAGFLGAVQYYLGQHVYDVATMAADCEG
MPVGLDCIAASLRIHPPWGSPRLAGAAGVRALLAFRILKDGQFGGNVERFRGLFQGLQH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgtgtatccaccgccgccgccgcgcttcaagttcaaccgcatgtttcccgtg
caggcgcagctcccgccgtttgcctaccacgctgctcccctgccgccggtacagccgcag
ctggcggtccaggtgcgtccagtgtgggcggggagcttcaacgaagagtgggcctacctc
cagagcttcgccgcgtgcgcccgctacgtcgctatcgacgtgcactacccgggactcgtc
cacgccgccggacaggacctcagcagcctgacggtagagcaccgctacgcgctcatgaag
gccgacgtggacggcctgaagccgctccaggtcggcatcgccgtctgcgaccacctcggc
cagcaggtcgcctgggagttcaacctccgcgacttctgccgccccgccgacccgcacaac
gacaaggccctcgactaccatgccgcccgcggcctcgacctcgacacgctccgcaaccac
ggcgtcgacgcctacatgctcggcgcgctgctcatgggttccggcctcatcggcgccgga
cacgggcggccgctgtcgtggatcacccacgccggtgcctaccacgtggcgtacctcctg
aagattgtcacgggcggggccccgctgccgcacgacgtggccgggttcctcggcgccgtg
cagtactacctcggccagcatgtctatgatgttgccacgatggcagccgactgcgagggc
atgccggtggggctggactgcatcgccgcgagcctgcgcatccatccgccgtgggggagc
cctcgcctcgcgggcgccgccggcgtgcgcgcgcttctggccttcaggattttgaaggac
gggcagttcggcggcaatgtggagaggttccgaggcctgtttcagggcctgcagcattag
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