Triticum aestivum (bread wheat): 123071897
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Entry
123071897 CDS
T07757
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-3-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03022
Basal transcription factors
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123071897
09124 Replication and repair
03420 Nucleotide excision repair
123071897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123071897
03400 DNA repair and recombination proteins [BR:
taes03400
]
123071897
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123071897
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123071897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
123071897
NCBI-ProteinID:
XP_044351404
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Position
3B:706960701..706970178
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AA seq
600 aa
AA seq
DB search
MGTMTIGAKYKTTLKDPGHGGVLRMSEDKLTFTPNDPRSLMKLSVDFRSIKGHKFNKVDG
SKPAPPLLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARPNVPPEKAA
VSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETNKAS
KQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKD
FWTKYCRAEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEAD
AGDDYIHLPDHGILRDGSRETTDIDSELARRTLSQDLNRHAAVVLEGRSTDIESTDTKTV
AEALARSKKEPPPSSAADDASHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQ
QANALRPLGSNDGRKARSCSLSTDDAFRHLMDQISSVKMNCPVVQSDVALKVLSELNEGI
SRSRRLNLKNPQDSLLGRLPHRTREELMDHWTAIQELLRHFWSSYPITTTVLSNKVQRLK
EAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFYHDQQQKSSKAGTGSKPNGF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatgacgatcggtgccaagtacaagaccacgctcaaggaccccggccacggc
ggcgtcctccgcatgagtgaagataagttaacatttacccctaatgatccgcgctcacta
atgaagctcagtgttgatttccgaagcatcaaaggccataagtttaacaaggtagatggt
agcaaaccagcgccaccattattgaatctttcaaaagattctgacaaggggggaggctat
atttttgagtttgacaatgttggtaaccgtgatttgtgtcgcgactttgtagctagggtt
ttaggcaaacatcaaggtactgtgcctgctagaccaaatgtacccccagagaaagcagct
gtgtcaactggtccagaacagctcagttctgccgaaatggaacggcggatgaaattgcta
cgagaagacagtgaactgcagaagttacataagaagtttgtgcttggcaatattcttcaa
gagtctgaattttgggcaacaagaaagaatttacttgacgatgaaacaaacaaagcgtca
aaacaaaagccaggtttcaaaagtgccatgctagctgatgttaggccatcagctgatgga
cagacaaacaaggttactttcagtctgactactgagattatccatcagatttttgcagaa
aagccagctgtgcatcgggcatttttggattatgtcccgaagaagttgtcagaaaaggat
ttttggacaaaatactgtagagctgagtatctacttaggacaaaaaatactttagcggca
aaagctgaagccgctgacgatgaggaattagccatgtttttgaaaaatgatgatatactt
gccaaggaggcaaagctcaagataaaacgagttgatccaacattagacatggaggcagat
gcaggggatgactacatccatcttccggatcatgggattctccgtgacggcagcagagag
acaactgacattgatagcgaattggctaggagaacactttctcaggatctgaatcggcat
gctgctgttgttcttgaagggagatcaacagatattgaatcaactgatacgaagactgtg
gctgaagcacttgcaaggtccaagaaggaaccacctcctagctctgctgctgatgatgct
agtcatgagagattggtaaaggtggcccgcatgactgagatagaggatctgcaagctcca
cgaagtctcccatatgcaccactttgtataaaggatcctcgagaatattttgattctcag
caagcaaatgctctgagacctttaggtagcaacgatggaagaaaggcccgcagctgcagc
ctgagcaccgatgatgcattccgtcatttaatggatcaaatatcttccgtaaaaatgaac
tgtcctgttgttcagtcagatgttgctctaaaggttcttagcgaattgaatgaaggaatt
tcacgttcacggaggcttaatcttaagaatccccaagacagtctccttggtcgtcttcct
caccgaacacgagaggaacttatggatcattggacggctatccaggagttgctgcgccat
ttttggtcatcatacccaataacaaccacagtccttagtaataaggttcaacgactgaag
gaagcaatgacacagatatatcagaagttacaggatataaaggaatcggcacagcctgat
gtacggcatgaaatatctcaactcgtaaagcccatgacacaggctctggatgctgcattc
taccatgaccagcagcagaaatcttcaaaggccgggaccgggagcaagcccaatgggttt
tga
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