Triticum aestivum (bread wheat): 123072613
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Entry
123072613 CDS
T07757
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123072613
03015 mRNA surveillance pathway
123072613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123072613
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123072613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123072613
NCBI-ProteinID:
XP_044352135
LinkDB
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Position
3B:814977673..814982899
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AA seq
426 aa
AA seq
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MAKPRRGRSGSRSSSGSSSRSASSGSSRSRSRSRSLSSSSSSPARSRGRSPPAAKRSSPG
AKKARSPSPPVKKGSPSRKGRSSSPPPKKASPPRKASPPPQSVVLHVDHLSRNVNEAHLK
EIFGNFGEVVNVELSMDKFVNLPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLKFTL
PPRQRASSPLKPPPPPPKRDAPQNDKVAIGAEKDAPQRPGGSASPRKKPPSPPRKRSPPN
RRAESPRRPPNPSPRRRAESPIRRRPDLSPVRRGDRRPGSPIRRRSPSPRRHRSPMRRGR
GSLSPRRRSPGPPRRSPGPPRRRSPPPRRLRSPPRRPPPPPPRRHSRSPPPRRPLHSRSR
SISPRRGRGPPLRRGRSDSSYSASPSPPRKGPRRVSRSRSPRRPPRGRSGSSDSGSSSSS
PTPRRR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccccgccgcggccgctccggctcgcggtcctcgtcgggctcctcctcccgc
tccgcctcctcgggctcctcccgctcgcgctcgcgctcgcgctccctctcctcctcctcc
tcctcgcccgcccgctcccggggccgctcccctcccgccgccaagcgcagttcacctgga
gcaaagaaagctcgatcaccttcaccccctgtcaaaaaagggtcaccatcaagaaaaggc
cgctcatcatctcccccacccaagaaagcgtcacctcctaggaaagcatctcctcctcct
cagtcggttgttctacatgttgatcatctatccagaaatgtgaatgaggctcatttgaag
gagatatttggaaattttggtgaagtggtgaatgtggagctatcaatggacaaatttgtt
aatctccctcgtgggtatggatacatcgagttcaagaagaggactgatgctgagaaggct
cttctttacatggatggtgggcaaattgatggaaatgttgtcaagttgaagttcacactg
ccaccacgccaaagggcttcttcacctttaaagccacctcctcctccccccaaaagagat
gctcctcagaatgataaagttgctattggtgctgaaaaggatgctccgcagcggcctggg
ggatcagcatctccacgaaagaagccaccttctcctccgcgaaagaggtctcctccaaac
agaagggctgagtcaccccggcgtccacccaatccatctccaaggcgtcgtgctgagtct
cctattcgtcgtcgaccagatctttcccctgttaggcgtggtgacagaagaccaggatct
ccaattagaagacgttctccttcacctagaaggcataggtcaccaatgcggaggggtcgt
ggcagcttatcaccacgcagacgctccccggggcctcctaggcgctcacctgggcctccc
agacggcggtcaccaccaccaaggaggttgaggagccctccgagaaggccaccaccacca
cctccgcgccgtcacagccgctcccctcctcctcgccgccctcttcactcccgctccaga
tcaatttctcctcgtaggggccggggaccaccattgaggcgtggaaggtcagattcgtcc
tattctgcatcacccagtcctccaagaaagggacctagaagggtgtcaaggagccgcagc
cctagaaggcctccaagaggaaggagtggctctagcgacagcgggagcagcagctcttcc
ccaaccccaaggcgcaggtag
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