Triticum aestivum (bread wheat): 123072636
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Entry
123072636 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123072636
03009 Ribosome biogenesis [BR:
taes03009
]
123072636
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123072636
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123072636
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
90S particles
Helicases
123072636
Pre-60S particles
123072636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_C_2
SNF2-rel_dom
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
123072636
NCBI-ProteinID:
XP_044352171
LinkDB
All DBs
Position
3B:817755797..817759311
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AA seq
645 aa
AA seq
DB search
MDVAGAQARALPLLLGRPAASLRCSVSFSCGGARRSWAATADGEDGSRDYERVAMDTSGA
YRLVDRSTGKSVIVWGGVDDDGVPSPAVLSRVTADRCASKGAENGGSTAGVGSFGRLKAQ
KVQALARRSAAQLKREGTCGRTSIARPSESPYADSDEDGSKSGRRKSVSDRAKPNGDSGD
ERSRAVRSLNSVLRQYKGDDDSDFSDEEPASGPKVWGKVADATSYRREDRKQKAPLDSGF
FSRRSFKEIGCGDEILGALRTFGFPQPSHIQAMAYGPVLEGRSCIIADQSGSGKTLAYLC
PIVQNLRKEEAMGIHKPSPRNPRVIILTPTAELSSQVLQNCRSISKSGVPFRSMVATGGF
RQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCAVFDEVDILFSEEGFEQVLHQ
LITVAPVTTQYLFVTATLPLDIYNKVVETFPDCEVIMGPSVHRTSARLEEILVDCSGNDS
DEKNPETAFSNKRTALLKIIEESPVRKTIVFCNKIETCRKVENVLTRLDRKASQIKVLPF
HAALDQAKRIANMKEFLKKQTNDSMFLVCTDRASRGIDFTNVNHVVLFDYPRDPSEYVRR
VGRTARGASGDGKAFVFAVGKQVSLARRVMERNLKGHPLHDVPCF
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgggggcgcaggcgcgcgcgctgccgctcctcctcggccgcccggccgcc
tcactccggtgctccgtctcgttctcctgcggcggcgcgcggcggagctgggccgccacg
gcggatggggaggacggcagccgcgactacgagcgggtggccatggacacctccggcgcg
taccggctcgtggaccggagcaccgggaagagcgtcatcgtgtggggcggcgtcgacgac
gacggcgtgccgtccccggcggtcctctccagggtcaccgccgaccgctgcgcctccaaa
ggtgcagaaaatggggggagtactgcaggtgttgggagctttggaagactcaaggcgcag
aaagtgcaggctttagctaggagatcagcagcccagctcaagagggagggcacttgtggc
cgcacaagcatcgcacggcctagtgaatctccttatgctgattctgatgaagatggaagc
aaatctggaagaaggaagtctgtctcagaccgcgcaaaaccgaatggtgactccggggat
gagaggagcagggccgtgcgttctctgaattctgtcctgaggcaatacaaaggcgacgat
gattcagatttttctgatgaagagcctgcttctggccccaaagtttggggtaaagttgcc
gatgctacgtcttatagaagagaggatcggaagcagaaggcccctttggacagtgggttt
ttcagccgcagatcttttaaggagattggctgcggcgatgagattctaggtgcattgaga
acctttgggtttcctcaaccatcacatattcaggctatggcatatggtcctgtcttggag
gggaggagttgcattattgctgatcagagtgggtctggcaagacattggcatatctctgc
cctatagttcaaaatttaaggaaggaagaagctatggggatccacaaaccatcgcccagg
aacccgcgagtcataatattgacacctactgctgaactttcttctcaggtccttcagaat
tgccgttcaatttcaaaatctggggtccccttcaggtctatggttgcgaccggtggattt
cgacagaagacgcagctggaaagccttgatcaagagctagatgtacttatagcaacacct
ggtcggttcctgtatctgcttcaggaaggctttgtgcagctaaataacctcagatgtgcc
gtgttcgatgaagtggatattttatttagtgaagaaggctttgaacaagtgcttcatcag
ttgattactgtcgcaccagtgaccacacaatatctttttgtcactgcaactcttcctctt
gatatatataacaaggttgttgaaacctttcccgactgtgaggtgatcatgggacctagt
gtccaccggacaagcgcccgtcttgaagagattcttgtggactgcagtggaaatgacagt
gatgaaaagaatccggaaacagccttttcaaacaagagaacagcacttctaaagattatt
gaggaatctccagttcgtaaaacaatcgttttctgcaataagattgagacatgtagaaag
gttgagaacgtgctgacacggctggacaggaaggcgtcacagatcaaggttctaccgttc
catgctgcactggaccaggcgaaacgcatcgcaaacatgaaagagttcctgaagaaacag
actaacgactcaatgttcctcgtgtgcacagacagagcttcgcgagggatcgacttcaca
aacgtgaaccacgtggtgctcttcgactacccccgcgacccgagcgagtacgtgcgcagg
gtcggcaggacggcccgtggcgcgtcgggcgacggcaaggcttttgtgttcgcggtgggc
aagcaggtgtccctggccaggagggtgatggagaggaacctcaaggggcacccgctgcac
gacgtcccgtgcttctag
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