Triticum aestivum (bread wheat): 123077208
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Entry
123077208 CDS
T07757
Name
(RefSeq) DNA excision repair protein CSB-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123077208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
taes03036
]
123077208
03400 DNA repair and recombination proteins [BR:
taes03400
]
123077208
Chromosome and associated proteins [BR:
taes03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123077208
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
123077208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
WHD_SOWAH
AP1AR
AAA_34
Motif
Other DBs
NCBI-GeneID:
123077208
NCBI-ProteinID:
XP_044355366
UniProt:
A0A3B6GNH9
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All DBs
Position
3D:complement(41789401..41794622)
Genome browser
AA seq
1221 aa
AA seq
DB search
MAEEDDDQRLLHSLGVTSANIDDIERKILSQAKTDPKKGDAETPGPTATGDQESSLTTPQ
DDAQAKLHQKLRSVQLEIDAVASTLGGAKQAAGKKSGGGGSGCADAEDKKKKKKEKVKEE
ENADEDAPRGGALQQALAAERLRSLKRAKVQIQREILQSGPGPSGSGNQKDKMLAMLVED
EPRRKKSLKPPGGPKKKSPTRRLKTVTYDDDDDFDTVLDGASAGFMETEREELIRKGLLT
PFHKLKGFEKRVERPGTSSRQNGSAEQAEETMEASSIAKVAQAMQNMAQSRPTTKLLDAE
FLPKLEAPTAPFQRLGVPLKRHGLPSSDERKNKRLKSKTKRPLPGKKWMKANSKKETLLD
VADEDVGDAAASASVSENEDEVIEGSDGLPPVILEGGLRIPGSVYTQLFDYQKVGVQWLW
ELHCQRAGGIIGDEMGLGKTVQVLSFLGALHDSGMYKPSIVICPVTLLQQWRREASKWYP
KFKVEILHDSANSSSKKGKRYSDSESDVSWDSDQEEVTRMKPAQKWDDLISRVVNSGSGL
LLTTYEQLRIIREKLLDVEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQN
KLSELWSLFDFVFPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMP
YLLRRMKADVNAQLPKKTEQVLFCSLTQEQRATYRAFLASSEVEQIFDGNRNSLYGIDVL
RKICNHPDLLEREQAAQNPDYGNIERSGKMKVVEQVLKVWKDQGHRVLLFAQTQQMLDIL
ENFLTARDYQYRRMDGLTPPKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVII
FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQ
QRRFFKARDMKDLFTLQDDDKNGSTETSNIFGQLSEDVNIGAPDGEERGERSSALPTSAE
AEPSVDGDGKSDLRSDQADEESNILKSLFDGQGVHSAINHDAIMSANDDQKLRLEAEASQ
VAQRAAEALRQSRMLRSRDDFAVPTWTGRAGAAGAPTSVRRKFGSTLNTQLVSSSQPSEG
SSSSSRVQSLQVGALHGKALSSAELLAKMRGTREGAASDALEHQLSLGSTSNQRPGSTEN
GRTSNSSSSRNMIVQPEVLIRQLCTFIQQNGGSASSTSLTEHFKNRIQPKDMLVFKNLLK
EIATLQRGAGGATWVLKPEYG
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggacgacgaccagcgcctgctgcacagcctcggcgtcacctccgccaac
atcgacgacatcgagaggaagatcctgtcgcaggcgaaaaccgacccgaagaagggcgac
gccgagacgccggggccgaccgccaccggtgaccaggagagtagcctgacaacgcctcaa
gatgatgctcaggccaaactgcaccagaaactgcgctccgtgcagcttgagatcgacgct
gtggcttccacgctcggaggggctaaacaagctgctggaaagaaaagcggcggcggtggc
tcgggttgcgctgatgctgaggataagaagaagaagaagaaggagaaggtgaaggaggag
gagaatgctgatgaagacgcccctcgtggaggagccctccagcaggcgcttgccgctgag
cggctcaggagcctcaagagggctaaggtgcagattcagcgagagatattgcagtcggga
cctggcccgtccgggtcgggcaaccaaaaagacaagatgctggcaatgctggtcgaagac
gagccgaggcggaagaagtcactgaagccgcctggtgggcctaagaagaagtcgccgacg
cgtcggttgaaaaccgtcacctacgatgatgacgacgacttcgacacagtgctcgatgga
gcttctgcggggttcatggagactgaaagggaagagctgataaggaagggtttgctgaca
ccgtttcacaagttgaagggctttgagaagcgcgttgagcgccctggaacttctagcagg
caaaatggctctgcagaacaagccgaggaaaccatggaagcttccagcattgctaaagtt
gctcaggcaatgcagaacatggcacaaagccgcccaactaccaaattgcttgatgcggag
ttcttgcctaagctggaagcaccgactgctccgtttcaaaggcttggagtacctctaaaa
cgccatggccttcccagttcagatgagcggaaaaacaaaaggctaaagagtaagaccaag
agaccgttgcctggcaagaaatggatgaaagccaattcaaagaaggagacattattggat
gttgcagatgaggatgtgggagatgcagccgcatcagcttctgtgtctgagaatgaagat
gaggtaatagaaggttctgatgggttacctccagtcatccttgaaggtggtttaagaatt
cctggctcagtttacacacagctgtttgactaccaaaaagtgggagtgcagtggttatgg
gagttacattgtcaaagggctggtggaataattggcgatgaaatgggcttaggaaagacc
gtgcaggtcttatcatttcttggtgctttgcatgacagtggtatgtacaagcctagtatt
gttatctgtcctgtgacccttttgcaacagtggcgaagggaggccagtaagtggtatcca
aaattcaaagttgagatcttacatgattctgcaaacagttcaagtaaaaagggcaagaga
tacagtgattctgagagtgatgtttcttgggatagcgaccaggaagaggttacacgtatg
aagcctgcacaaaagtgggatgacttgatttcacgtgttgtaaattcagggtcaggtttg
cttctgactacatacgagcagctaagaatcatacgggagaagttgcttgatgtagaatgg
ggatatgctgtattggatgagggtcaccgcataaggaatcctaatgccgaagtaactctc
gtgtgcaagcaattgcagactgtgcacaggataattatgacaggggcgcctatccagaat
aaactttcggaactgtggtctctctttgattttgtgttccctgggaaattaggagtcctt
ccagtgtttgagaccgagttctcagttccaattactgtcggtgggtatgctaatgcaaca
ccattgcaagtgtccacagcgtacagatgtgctgttgtcctgcgtgacttgatcatgcca
tatcttcttaggagaatgaaagctgatgtcaatgcacagcttcccaagaaaacagagcag
gttcttttctgtagtttaactcaagagcaacgtgctacttatcgtgcattccttgctagt
tcagaggtggagcaaatatttgatggtaacagaaactccctttacgggatagatgtccta
aggaagatatgtaatcatcctgatcttcttgagagagaacaagccgctcagaatcctgac
tatgggaatattgaaagaagtgggaagatgaaagtggttgagcaagtacttaaagtctgg
aaagatcaaggccatcgtgttcttctttttgctcagacccaacagatgcttgacattttg
gaaaacttcttgactgcccgcgactaccaatatcgaagaatggatggacttacacctcca
aagcaaagaatggcactcattgatgagttcaataatacagatgaaattttcattttcatt
ctgacaacaaaagttggtggattgggtacgaatttgactggtgcaaacagggttataata
ttcgatcctgactggaacccttcgacagacatgcaggccagggaacgagcatggcgaatt
gggcaaaaaagagatgtgacagtttacaggttgatcacacgtgggacgatagaggagaaa
gtctaccatcgacagatatacaagcattttctcacaaacaaagtactgaaaaaccctcag
caaaggaggttctttaaagccagagacatgaaagatttattcacattgcaagatgatgac
aagaatggttcaactgaaacatcaaacatttttggccaactgtctgaagatgtgaacatt
ggtgctccagatggcgaggagcgaggcgagcgatcttcagctttaccgaccagcgcagag
gctgaaccatctgttgatggagatgggaaatcagaccttagatctgaccaagcggatgaa
gaatccaacattttgaagagtctttttgatggccagggcgttcatagtgctataaatcat
gatgccataatgagtgctaacgacgatcagaagctgcggctagaagcagaggcttcacag
gtggcacaaagggcagccgaggctttacgccaatcacggatgctcagaagccgtgatgat
tttgctgttcccacatggacaggaagagctggtgctgccggggcaccaacctctgtccgc
aggaaatttgggtcaacactcaacacccagctggtcagttcttcgcagccatcagaaggt
tcaagcagcagcagcagggttcaaagtcttcaggtgggcgctctacatggcaaagcactg
tcctccgccgagcttttggctaagatgcgtggaacgcgagagggggcagcttcagatgca
ctggaacatcaactcagcctgggctccacttccaaccagagaccaggctcgacagagaac
ggacgcacatctaactcttcttctagcaggaacatgattgtgcagcctgaggtcctgatc
cgccagttgtgcaccttcatacaacagaatggtggctccgccagctcgacgagcttgacg
gaacatttcaagaaccgcatacagcccaaggatatgctggtgttcaagaacctgctgaag
gagatagcaaccttgcaaaggggcgcaggcggcgcgacgtgggtgctgaaacccgagtac
gggtaa
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