Triticum aestivum (bread wheat): 123077348
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Entry
123077348 CDS
T07757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123077348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123077348
03009 Ribosome biogenesis [BR:
taes03009
]
123077348
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123077348
Spliceosome [BR:
taes03041
]
Complex A
U1 snRNP components
U1 related factors
123077348
Complex B
123077348
Ribosome biogenesis [BR:
taes03009
]
Eukaryotic type
Pre-60S particles
Helicases
123077348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123077348
NCBI-ProteinID:
XP_044355565
LinkDB
All DBs
Position
3D:complement(53604858..53612552)
Genome browser
AA seq
1354 aa
AA seq
DB search
MAGAEAAADSSGPRFAPDDPTLPAPWKALIDGETLYYWNPETNLTQYDKPGAAAPPLPAA
ASTPAPGAFAQPGMQQQQPSTPAPGAFAQPGMQQQQPPQQPQQTAQRPPFQYQGQQAQQP
PFQYQGQQAQQPPFQYQQQQEQMPNQQGSQQPLAPQYPNAHQQPMPYQHGHYMQPQQQYS
YQVGQQPQMPQTQYNQGQQMPIPQAANQGQQPTMPQGAYNQGQRPPMPQAAYSHGQRPPM
PQSAYNQGQQPQMPHASYNQGQQLQGTRMPQTQVQHTQQSPGFHQPAQASQGLQASQPQV
PQMSPQQGQLQHGFQFTPQQGKQPHHGHLVSQHGQQNTTVKVDAGAHHEGKQTGFSLQLS
QQHGQVPLSNQTLPSSHQRPEAHNQLNIHGVGGPPYPAKHHLGGSSPGETNNVSFLSAPA
QTHQGGVDTNYRQQLASSHVVPNHIAPSPGRPPIGFKRGNSEDQFEKNEALSSGRFDGIN
ALHQQPKPAALPPPQNHLQDMRNGPPYSQPDNFGGYNMAPPHLVQNPLNNGPFPIGALAR
PPSGTFSPPDFPSVASVDAYRQHHEVTAVGENVPPPFMTFEATGFPPEILSEVHAAGFLN
PTPIQAQTWPVALQSRDIVAIAKTGSGKTLGYLIPAFVHLRRCQNNPMSGPTVLVLAPTR
ELASQIQDEAIKFGRSSRVSCTCLYGGAPKGPQLRELERGADIVVATPGRLNDILEMRKI
SLHQISLLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLRNP
VQINIGSIDELVANKSITQYVEMVPPMDKQRRLEQILRAEERGSKIIIFCSTKKMCDQLA
RSIGRSFGAASIHGDKSQGERDHILGQFRTGIVPVLVATDVAARGLDIKDIRVVINYDFP
TGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLVKVLDGTGQQVPPELQQMAARGA
SGAPRNQAGGMSRWDSPGGGTRFESAVGGPGGYGGIREGPGGFGGRDGPGGFIDRDGPGR
FGDRDGPGRFGGRETPDGFGGRDGPGCFDGRMGPGPGGFGGREGPGGFGGREGPGPSGFS
GRGGRGSDGFGRRGGASPGRFGGHGGRGDSPGFGGRGRGDSSGFGGRGRGDFSGGRGGRG
RGFGGRGRSDRGPHDRFISDGRGRYDGRRGFDKGRGRSYSRSPDRSRSRGYDRRSDSRSL
SSRSRSRSRSWSRSRSRSRSWSRSRSRSRSRSRSRDQGPVERRPRVRSGFDVLPPATEAG
AAVTGPLPVPLPGSVSDVAAPIPRQSLADASDMSPMSPGGLVHVQEGAPFMGGNDANISS
RQADQPSQATDLTIPPSFSAAANFPGPAVQQDAP
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcagaggctgccgcggattcatcgggcccgcgattcgcccctgacgacccg
acgctcccagcgccttggaaagcattaatcgacggcgagacgctctactactggaaccct
gagaccaacctcactcagtatgacaagccgggtgcagctgcgcctcccttgcccgcggct
gcgtccacgccagcgcccggggcttttgcgcagcctggcatgcagcagcaacagccctcc
acgccagcgcccggggcttttgcgcagcctggcatgcagcagcaacagcccccgcagcag
ccgcaacagacggcacagcgaccgccgtttcagtatcaaggtcagcaagcacagcaaccg
ccgtttcagtatcaaggtcagcaagcacagcaaccgccgtttcagtatcaacagcagcaa
gaacagatgccgaaccagcaagggtcacaacagccactagctcctcagtacccaaatgct
catcagcagccaatgccatatcagcacggtcattatatgcaaccccagcagcaatattca
tatcaggtaggccagcagccacaaatgccgcaaactcagtataatcaaggccagcagatg
ccaatcccgcaagctgccaatcaaggtcagcagccaacgatgccacaaggagcttataat
caaggtcagcgtccaccgatgccgcaagctgcctacagtcatggccagcgcccccctatg
ccacaatctgcctacaatcaaggccagcagccacaaatgccgcatgcttcttacaatcaa
ggtcagcagttgcagggaacaaggatgcctcagactcaagtgcaacacacacaacaatca
ccaggctttcatcaacctgcccaggcttcacaaggcttgcaagcttcacagcctcaagta
cctcaaatgtccccccaacagggccaactccagcatggcttccagttcacccctcaacag
ggaaaacaaccacatcatggtcatcttgtctcccaacatgggcaacaaaataccacggtg
aaggttgatgcaggagctcatcatgaaggaaagcagactggcttttccttacagcttagt
cagcagcatggccaagttcctctttcaaaccagacgttgccttcaagtcatcaacgtcct
gaagcccataatcaactaaatattcatggagtcggagggccaccatatcctgcaaagcat
catcttggtggatcatccccaggtgaaactaataacgttagtttcttgagcgcgcctgct
caaacacatcaaggcggagtggatactaactaccggcaacaactggctagtagccatgta
gttcccaatcatattgctccttcaccgggtcgacctccaataggtttcaagaggggcaat
agtgaagatcaatttgaaaaaaatgaggctctctcctctgggaggtttgatggaataaat
gctctccatcagcagccaaaacctgccgctcttccacccccacaaaatcacctgcaggat
atgaggaatggcccaccttattcccagccagataattttgggggttataacatggcacct
ccacatttggtacaaaacccacttaacaatggtccatttcctatcggagctttagcgagg
ccaccatccggaacattttctcctcctgatttcccaagtgtcgcttcagtagatgcatat
cgtcaacaccatgaagtaactgcagtgggtgagaatgttcctcctccatttatgacattt
gaggctactggattccccccagagatcctgagcgaggttcatgctgctggcttcttaaac
cccaccccaattcaggctcaaacatggcctgttgcacttcaaagcagggacatagtagct
attgccaagacaggatcagggaagacactggggtaccttattcctgcttttgtacatctg
aggagatgccaaaacaatccaatgtcgggccctacagtgttggttttggcccctactcgt
gagcttgcttcacaaatacaagatgaagcaattaagtttggtcgatcatctagagtatca
tgcacatgcctgtatggtggagctccaaagggacctcagctcagagaacttgagcgtgga
gcagatattgtggtagctacacctggacgactcaatgatatcctggaaatgaggaagatt
agcctccatcagatttcattacttgtgcttgatgaagctgaccgcatgcttgacatgggc
tttgagccacaaatacggaagattgttgacgagattcctcgtaatagacaaactctaatg
tacactgccacttggccaaaggaggttacaaaaatagctggggatttattgagaaatcct
gtccagatcaatattggtagcattgatgaacttgttgccaacaaatccatcacacagtat
gtagagatggttccacccatggataagcagcgtcgcttggagcagattcttagagcggaa
gaaaggggctcaaagatcatcatattttgctcaaccaagaaaatgtgcgatcagcttgct
cgtagcattggtcgtagttttggtgctgcaagcattcacggcgacaaatcacagggtgaa
agggatcatattctgggtcagtttcggactggtattgtgccagtattagtggccacagat
gttgctgctcgtggacttgacatcaaagacatcagagtggtgatcaattatgacttccca
actgggatcgaagactatgtgcatcgcatagggcgtacaggaagggctggggctactgga
gttgcatacactttcttctctgagcaagattggaaatatgctgctgatttggtgaaagtc
ttggatggtactggtcagcaggtacctccagagctgcaacagatggctgcacggggtgca
tctggtgctccaagaaaccaggctggtggcatgagccgttgggatagtcctggtggtggt
actcgttttgaatctgctgttggcggccctggtggttatggtggaattagggagggccct
ggaggctttggtggtcgagatgggccaggtggatttattgatcgggatggcccgggcaga
tttggtgatcgagatggccccggccgctttggtggtcgagagactcctgacggctttggt
ggtcgggatggccctggttgcttcgatggacggatgggccctggtcctggtggatttggt
ggaagggaggggcctggtggatttggtggaagggagggtcctggacccagtggcttcagc
gggagaggggggcgtgggtctgatggctttggcaggagaggtggagcaagccctggtaga
tttggtggtcacggtggcaggggtgattctcctggttttggtggtcgtggtaggggtgat
tcttctggttttggtggacgaggccggggtgatttctctggtggacgtggtggaagaggg
cgtggatttggaggacggggacgttctgaccgaggtccacacgatcgttttatctcagat
ggacgtggaaggtatgatggccgtcgaggatttgacaagggtcgaggcaggagctacagc
cgtagcccagatagaagccgctcgcgaggctatgacagaagaagtgatagcaggagccta
agtagtaggagcagaagccgtagcagaagctggtcacgcagcaggagccgcagcaggagt
tggtcacggagccgcagccgtagtcgcagcaggagcagaagccgtgatcagggtccagta
gaacgcaggccgcgggtaagatctggttttgatgtgttgccacctgcaactgaagctgga
gctgctgtaactgggccacttcctgtaccactacctggttcagtgtctgatgttgctgca
cccatacctagacaatcgctggctgacgcatctgatatgtcacctatgtcgcctggtggc
ttggtccatgtccaggagggtgcaccgttcatgggtgggaacgatgccaacattagcagc
agacaggctgaccagccttcccaagcgactgatctaacaataccaccaagcttctctgca
gctgcaaattttccagggccggcagttcagcaggatgccccatga
DBGET
integrated database retrieval system
