Triticum aestivum (bread wheat): 123077468
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Entry
123077468 CDS
T07757
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123077468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
taes03041
]
123077468
Enzymes [BR:
taes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123077468
Spliceosome [BR:
taes03041
]
Complex C
Other components
Step II factors
123077468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD_DEAH11
RRM_DEAH11
Helicase_C
KH_DEAH11_1st
DEAD
OB_NTP_bind
RRM_1
AAA_19
ResIII
AAA_22
nSTAND3
AAA_11
HA2_N
AAA_29
ABC_tran
Helicase_RecD
Arc_MA
gp37_trimer
Motif
Other DBs
NCBI-GeneID:
123077468
NCBI-ProteinID:
XP_044355679
LinkDB
All DBs
Position
3D:complement(67133156..67141191)
Genome browser
AA seq
1337 aa
AA seq
DB search
MRPSQDRRPFRPPDRVSPPPHLHRQQRLRQPPPHARQFAVILLLAGPTFSSPPATEVDAL
VAGLQSPPPDGLSVCSSGRHAARLLFRSLPAAAAAARELWSLRLDGLHLLTPHLPDAALA
SHAFPLVASLFASHASRLLDSGLISRSAARSAELAVSIQSVKRRLRGHNNFRDFDQFNLQ
KKTLEAEKELVDARIAEYKAAMSLITRAMLRGTDDGEEVEEEGVDVFGIGEGEDVDFVRL
HMMMLRECRTLNEGLPIYAYRRKILNHIFNNQVMILIGETGSGKSTQLVQFLADSGLSGN
DSIVCTQPRKIAALSLAHRVDEESKGCYADNFMSSYSSFLNGQNFSSKIIFCTDSCLLHH
CMNDADLNGISYIIVDEAHERSLNTDLLLALIKKKLLDRLDLRLIIMSATADANRLAEYF
YGCQTFHVKGRNFPVEIKYVPDVSVDASFNIVASSLRGPCAAASYVNDVIRQVSIIHKNE
EEGAILAFLTSQLEVEWACENFTDASAVVLPIYGKLSPVEQSRVFKSYSGMRKIIFCTNI
AETSLTIKEVKYVVDSGLVKDSRFVPSSGLNVLKVNWISQSSANQRAGRAGRTGVGKCYR
LYSEADFSMMELHQEPEIQKVHLGTAVLRILALGVKDAQNFEFVDAPNPEAINMAVKNLE
QLGAVNCNCNCYELTDTGRHLVKLGIEPRLGKIMLDCFGFGLRKEGVVLAAVMANSSSIF
CRVGTDEEKHKADLQKVRLCHQDGDLFTLLAVYKKWEDGHENRNMWCWQNSINAKTMRRC
QETISELENCLKHELKIIIPSYWCWNPEAPSEHDKLLKRIILSSLAGNLAMFLGHERFGY
QVISTDQIVNLHPSCSLLNYCTKPDWVVFSEILSVPNQYLVCVTAVDHDALYAIHPMSSI
QQLEIHKLQIKVISGLGNNLLGKFVGKSGQNQQKIISRLKEDCKDDRLTVEVNFNNNEVV
LFATAQHMEKVFCIVNNALECEGKLMRNECLERSLFPERSGSSPIALFGSGAEVKHLELG
KRYLTVEVLHQNASDINDKELISLVDSLVSGIANFHKSSGNFRLGSDETKWGKITFLKPE
NAEDAVSKLNGVEFHGSSLRIVPVCSPDNQGLRFPSVRAKLCWPRKESRGLALVTCASGE
AQSVVDDCFALGIDGRYISCRVSTKEENCVFVERIPLHVSERELYDAFRSTTTRRILNIR
LLRVKEATIASPSVSVCEEVLIREISPFMPNKSFPGKSFRVEVFPPEENDSMMRATLTFD
GNLHREAARALDHLEGSILPCCQPWQIIQCKHVFHSTMSCSVRVYNVISQEVTSLLESFR
SQKGVSYNYEKTENGIF
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgtctcaggaccgccgccccttccgcccgccggaccgggtctcgccgcctccc
cacctccaccgccagcagcgcctccgccagccgcccccgcacgcgcggcagttcgcggtg
atcctcctcctcgcgggccccactttctcctccccgccggccacggaggtcgacgccctc
gtcgcgggcctccagtcgccgcctcccgacggcctctccgtctgctcctccggccgccac
gccgcccgactcctcttccgctccctccccgccgccgcggccgccgcgcgcgagctctgg
tcgctccgcctcgacggcctccacctcctcaccccgcacctccccgacgccgccctcgcc
tcccacgccttccctctcgtcgcctccctcttcgcctcccacgcgtcccgcctcctcgac
tccggcctcatctcccgttccgccgcccgctccgctgagctcgcagtctccatccagtct
gtgaaacgccgcctgcgcggtcacaataacttccgcgacttcgatcagttcaatctccag
aagaaaacgctggaggctgagaaggaattggtagatgcccgaattgccgagtacaaagca
gcgatgagtttgataacgcgcgccatgttacgtgggacggatgacggggaggaggtggag
gaagaaggtgtggatgtgtttgggattggggaaggagaggatgtggactttgtgaggttg
cacatgatgatgctgcgcgagtgcaggacgctcaacgaggggctaccaatctacgcatac
cgcagaaagattctcaatcacattttcaataaccaggttatgatcttaattggggaaact
ggttctgggaaaagcacacaactagttcagtttcttgctgactcaggtctttctggtaac
gattcaattgtctgcacacaacctcggaaaattgctgctttatcattggcacatagagta
gatgaagaaagcaagggctgctatgcggacaattttatgtcgtcatattcaagctttttg
aatggtcaaaacttcagttcgaagattatattttgcacagatagttgtcttttacatcac
tgtatgaacgatgcggacctgaatggcatttcctatatcattgttgatgaagctcatgaa
agaagcttgaacaccgatcttctcttagctttgatcaagaagaagctgcttgataggttg
gatttgcgactcattataatgtctgccactgctgatgctaatagacttgctgaatacttt
tatggctgccaaacattccatgtgaaagggagaaattttcctgttgaaattaaatatgta
cctgatgtatcagttgatgcttctttcaatattgtggcaagctctttgcgtggtccttgt
gctgctgcttcttatgtcaatgatgttataagacaggtaagcatcatccacaagaacgaa
gaagagggtgccatccttgctttcttgacatcccagctagaagttgaatgggcttgtgaa
aatttcaccgatgcaagtgcggtggtacttcctatttatggaaagctttcccctgtggaa
cagagtcgtgttttcaaaagttattctggaatgagaaaaattatcttctgcactaatata
gctgaaacatcacttactataaaagaagtgaagtatgttgttgattctggactggtcaag
gacagcagatttgtgcctagcagtggtcttaatgttctgaaagtcaattggatttcccaa
agttcagctaatcaacgcgctggccgggcaggtcgaacaggagtggggaagtgttatagg
ctttactccgaagccgacttcagtatgatggaactgcatcaagaacctgaaatccaaaaa
gttcatcttggcactgctgttctaagaatacttgctttgggtgttaaagatgcacagaat
tttgagtttgttgatgccccaaatccagaagcaatcaatatggctgtgaagaaccttgaa
cagttgggtgctgtcaattgtaattgtaattgctatgagctgactgataccggacgccac
ttggtcaaattgggaattgagccaaggcttggaaaaattatgcttgattgctttggtttt
ggtttgaggaaggaaggtgtagttttagctgcagttatggcaaattctagcagcatcttt
tgtagagtgggcactgatgaggagaaacacaaagctgaccttcagaaagtccgtttgtgt
caccaagatggagatctgttcactctactcgctgtttataagaaatgggaggacgggcat
gaaaacaggaacatgtggtgttggcagaacagcatcaacgccaaaaccatgaggaggtgc
caggaaactatatcagaacttgaaaattgtctaaagcatgaattgaaaattataatccca
agttattggtgttggaatcctgaggctcccagtgagcatgataagttgctaaaaagaatt
atcctgtcatctcttgcaggtaatcttgctatgtttttaggacatgaaaggtttggttac
caggtgatttcaacagatcagattgtgaaccttcatccctcatgctcattgcttaattat
tgtaccaagccagattgggtggtgttttcagaaatcttatccgtcccaaatcaatatctg
gtatgcgtaactgctgttgatcatgatgctttgtatgcaattcacccaatgtcttccatt
cagcaactggagatacataaattgcagataaaggtgattagtgggcttggtaataacttg
ctgggaaaatttgttggcaaatctggccaaaatcagcagaagatcatctcacgtctcaag
gaagattgcaaggatgaccgattaactgttgaagttaactttaacaataacgaagttgtg
ttatttgctaccgcacagcacatggagaaggtcttttgcattgttaacaatgctttggaa
tgtgaaggtaagttgatgaggaacgagtgccttgagagaagtttatttcccgagaggtca
ggcagttctcctattgcactatttggctcaggtgctgaagtcaaacatttagaacttggg
aagagatatctgacagtagaggttctacatcaaaatgcaagtgacatcaatgacaaggag
cttattagcttggtggatagtcttgtctccggtattgctaattttcataaatccagtgga
aatttccggctaggctcagatgaaactaaatgggggaagattacattcctcaaacctgaa
aatgctgaagatgctgtctcaaaattgaacggggtagaatttcatggttcctctctaaga
atagttcctgtatgttctcctgataatcaaggtttacgatttccttcagtaagagctaaa
ttatgttggccacgtaaggaaagcaggggccttgcacttgtaacatgtgccagtggggaa
gctcaatctgttgtagatgactgctttgccttaggaatcgatggaaggtatatcagttgt
agggttagtacgaaggaggagaactgtgtatttgtcgaaagaattccattgcatgtctcg
gagcgggaactatatgatgcttttcgcagcacaacaacaaggagaatccttaatatccgc
ctgctcagggtcaaggaagccactatagctagcccctctgtttctgtatgcgaagaagtg
ctgattagagaaatttctccattcatgccaaacaagagttttcctggaaaaagtttccgt
gttgaagtgttccctcccgaggaaaatgactcgatgatgagagcaactttaacttttgat
ggaaatcttcatcgagaagctgcaagagcactggaccatcttgaaggaagtattcttcct
tgttgtcaaccttggcagataatacagtgcaagcatgtatttcatagcactatgtcctgt
tcagtgcgtgtttacaatgttatcagccaggaagtgacctctctgcttgagagcttccga
agccaaaaaggtgtgtcttacaattatgagaagaccgagaatggtattttctga
DBGET
integrated database retrieval system
