Triticum aestivum (bread wheat): 123077503
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Entry
123077503 CDS
T07757
Name
(RefSeq) uncharacterized protein LOC123077503 isoform X1
KO
K19026
spatacsin
Organism
taes
Triticum aestivum (bread wheat)
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123077503
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123077503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
123077503
NCBI-ProteinID:
XP_044355715
LinkDB
All DBs
Position
3D:complement(71584558..71605143)
Genome browser
AA seq
3112 aa
AA seq
DB search
MPISYEMEGGPTVLQLYKWKSLHPCLELSKFREASISPTRRLFGLLSEHGDLVLSTVNVQ
PSQVESPMALSDSSLPVFECFSSIPRVKSLAWGHCCDASSQLEVPAFSEFLVLSSDDSIT
VHAFCHSDKSAVTVNCDTEELHGEWKEWFPTKCSLPEDGESGARNRFRSFLTTISASVCN
GKYQARFPLKSSLPHSAVVVSFSIYDITLSFLKFWLSSCAMKTRMETDSGSPEDLPSHVP
VAEASCSCQWECLKVLPSSSGYLTGLVLTPNESVNCEVHQHNAKNILVAILELNHWGIQW
NFVVDLQTAYDDVEPNPQWVDFQLSDIFLASLNAVGFVAIWNAKTGHPISSFSVLDRCRI
DLEMPSATVTNVGESTCVGNVVGRMFKRLVLAPHSPLVAAVDEAGVVYVFYADDILNFKA
NAHEKFDQPSINHYGNNFAAWETAGHEIGSQTFCSHQPIRQGSLNPDKMVYDFSDRDNAG
VVRARKRRKYCKCNENQVDSWPSGFSTTSQMKDVVTYPSTMADSAHVRRVVLPPCRSQEN
VISLSPFGLTRIFRSCNAEGNKHVKIIHTKLLMASCSLDERDIDAGFLDRSLPYQKDFSF
AGESAVCSFQGYLYLVSQDNLSVVLPSVSVSSFSSRIDASQFWQPGFSGGSACNALNLLS
VNRLRTRLEAWQIEVLDKALLYEGPSLADRLCWENGWDMKISRLRWVQLSLHYTNINDLE
QSLNMLAEVDLAEEGVLQLLLASVYRLLCSTRSDHEAAVSSKLMVLAVRFATRTIKAYGL
LKQKKDMPANSVKLHEMAFLLGVIRSIQGRITAKNQNSVRMQGDDKNSLKIGKEVLQNDS
PSPVVVVDGVSPGLSAGLDAPDRQGSASTAFEFVPGSNRLLALTPVESSLTTNDIDTDQR
TTQVGRPVTQGNIKDMMNRWEMNKFDLKTIVGEALQSGRLPLAVLQLQLLRQRESCSGDD
FDDVFSEVHEIGRSIVYDLLMKGESGLAVATLERLGDDIESDLRQLMQGTVRRSLRLQIA
EEMKQRGYLRSNEWKMLETLALIERFYPSSSFWDTYLGRENVIHDAVNIVTLPGEDKPVL
ALHIRNHPAIECGDVDGAVLGSWVNVNDYADLKEFSQSNLSDGYWVCAAVWSDAWDQRTV
DRIILDQPCHISAQSDLPWESQFEYFVAHDDVGEVCKLLDMIPDSVLLEGILSINVDNSR
AGYSIVSDVSVPDYKMYICDSEELEPVCMEVPHVKIFRSLSNHESTSWMRMLMQEQLAKK
HIFMKEYWQSTTEIIPLLARAGILTNTAKIGPKKEASMPLIASEMPDDERHQACERALHK
LVIRFCVQYDSPYLLDLYLDNCNLILGEDSIPLLKEAAGDCKWAQWLLFSRVKGYEYEAS
FSNARWNLSLKMVNHGNLTAIEIDEILYTVDDMAERIGEMSALATLMYASPPIQKSICTG
SVNRNRGLSSQCTLENLGHCLQQFPTLWKTLRSTCFGQDGYGCLNYSPTNVSGKSAMSDY
LCWRYSIFSSAGGDTSLLQMLPCWFPKSIRRLIQLFEQGPFGMQLLSSAPSSEELFTHGV
TDYIYNTTGYSETNALSLEASIQKSVEEELYSSLEEKDLRVEHHLHRGRALAAFRHLLGK
RASQLKSANARQVISTQSDVQADVQLILAPLSQTERSVLLSVAPLAITNFEDSTLVASCT
FLLELCGMCTNMLCLDIAALQRISSYYNSAQQNKQSELSSPRSSGLHVLSHGADIAPALA
RALAEDYVQSDHLQILEQKQTSRGPKREQPSQPLIAILEHLERASLPLLDEGRTCGFWLL
SGIGDASLYRSQQNEASQHWNLVTEFCLAHHLPLSTKYLALLANDNDWVGFLTEAQRAGF
PIEVVIGVASKEIKDSRLRTHILTVLKNTLSNRRKSSSNIPSGSRDPSFLSVDGDNPMEL
FCILAVCEKQKNPGEALLNKAKQMQWSLLALIASCFPDVTLLSCLSFWLEITAARELSLI
KVDGISSKVAKNVGSAVEVTNKLPSVSRNVEYRYNRKNPKRRRFLEASPDSFKSGFSLDI
ASGPNGTATSNPSDIDAQQERRKPTSEETEIPVDIDERLASLSSIVAVLCEQQLFLPLLR
SFDLFLPSCSLLPFIRSLQAFCQMRLSEASAHLTSFSARIKDEASQSNSFKEASSITGWV
VATAVKAADAVLSTCPSLYEKRCLLQLLAAVDFADGGSSSAYFGRSYWKINLAEPSLCKD
GDIYKWNDSMDDASLLAALEKDGRWEDARTWARQLESSGIAWESTFDHVTESQAEAMVAE
WKEFLWDIPQERAALWGHCQSLFMRYSLPPLQAGLFFLKHAEALGKEIPARELHEILLLS
LQWLTGTITKSSPVYPLHLLREIETRVWLLAVESETHSKADGESSVVSQSPAIGNSTSII
EQTADVITKIDSSMSLPSMKAAERNGMRDNNLSHHQHLQLFEYNSEATTTNNARAKRRGK
TNLPLRRGVTDNVESSTNDSDDNSKVFFRSKIGEQARNLLSEEEFAKMEASLSGWEQHVR
PADMEKAVLSLLEFGQITAAKQLQQKLSPSYVPEELVLVDVALRVANNGGDGEINLLSFD
TEALSILQSLQIASGSNMIDPSQAMEKLAVKCGEGRGRALIRRIIAVVQTAKILGLPFSE
AFEKQPIELLQLLSLKAQDSFDEAKFLVETHIMPASSIARILADSFLKGLLAAHRGGYLD
SQKEEGPAPLLWRSSDFLKWAKLCPSEPEIGHALMRLVMTGHEVPHACEVELLILSHHFY
MSSSCLDGVDVLVTFAANRVDSYVSEGDFSCLARLITGVSNFHSLSFILSILIENGQLEL
LLQKYSSTDTATVAPASVRGFRLAVITSLKHFNPNDDEALSLVYKHFDMKHEAASLLESR
AEQYMESWLDRHDKERRNDELLKAMHNLVQTAEILSTIDAGQRTHRACARASLLSLQIRI
PDLVWIGLTETNARRIFVDQSRFQEALIVAEAYSINQPMEWAPVFWNQMLKPDLIELFVA
EFVLVLPLHPPMLVELARFYRAEVAARGDQSHFSVWLSPGGLPAEWGKHLGRSFRSLLRR
TRDMRLRLQLATLATGFSDVLEGCNAVLDKVPENAGPLILRKGHGGAYLPLM
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
atgcccatatcttatgagatggagggtgggcctactgtactgcagttatataaatggaaa
agcttgcatccctgtcttgaactatcgaaattccgggaagcgtccatttctcctacaagg
cgcctgtttggactgctctcggaacatggcgatcttgttctgtcaactgtcaatgtccaa
ccatcacaagttgaatcacctatggctctctcagatagtagcttgccagtgtttgagtgt
ttttcttctattcccagagtgaagtctttagcatggggacactgctgtgatgcttctagt
caacttgaggttccggctttcagtgaatttcttgttttatctagtgatgattctatcaca
gttcatgcgttttgtcattctgacaaaagtgcagtaacagtcaattgtgatactgaagag
ctgcatggggagtggaaagaatggtttcctaccaagtgctcactgccggaggatggcgag
tcgggtgcaaggaaccgctttcgctcttttctgactacaatcagtgcatctgtttgcaat
ggaaaataccaagccagatttcctctgaagtcttcattgcctcattctgcagtggtggta
tcatttagcatatatgatattactttgtcctttctgaaattctggttaagcagttgtgct
atgaagactaggatggaaactgacagtggatctcctgaggatcttccaagtcatgtacct
gtagctgaagcatcatgcagctgccagtgggaatgtttaaaagttttgcctagctcttcc
ggttatttgactggtttagtcttaactcctaatgaatcagtaaattgcgaggtccatcaa
cacaacgccaaaaatattttggtggctatccttgagctaaaccattggggtatacagtgg
aactttgtggtagaccttcagactgcatatgatgatgtggagcctaatccacagtgggtc
gatttccaactgtcagatatatttcttgcctcccttaatgcagtgggttttgttgccatt
tggaatgcgaaaactggtcaccctatcagctcgtttagtgttcttgatcggtgcagaata
gatctggagatgccttcggccactgtaacaaatgtaggagaaagcacctgtgttgggaat
gtcgttggcagaatgttcaagaggttagttttggcaccacattctccacttgttgctgct
gtagatgaggctggggtagtctatgtgttctatgctgacgatatcttaaatttcaaagcc
aatgcacatgaaaagtttgaccagccttctataaatcattatggcaataattttgctgcc
tgggaaactgctggtcatgagatcgggagtcaaacattttgcagtcatcagccaattaga
caagggtcacttaatccagacaaaatggtatatgatttttcagatagagacaatgctggt
gtcgtcagagctaggaaaagaagaaaatactgtaaatgtaatgaaaatcaagtggatagc
tggccaagtggtttcagtactacatcacaaatgaaagatgtggtaacttatccttccaca
atggcggattctgctcatgtgcgaagagtagtccttcctccatgcagatcacaggagaat
gtaataagcctctcaccatttggactgacaaggatctttagaagttgcaatgcagaggga
aataagcatgttaaaattattcacacgaagttgcttatggcttcatgttcacttgacgag
agagatattgatgctggttttctggacaggagcctcccatatcagaaggatttttctttt
gctggtgaatctgctgtttgctcctttcagggatatttgtatttggtttcgcaggataac
ctttctgtggtccttccatcagtgtctgtatcgtctttttcatctcgtatcgatgcctct
caattttggcaaccaggtttttctggtggtagtgcatgcaatgctctgaatttgttgtca
gtaaatagactccgaacaagattggaggcctggcaaatagaggttttggataaagcattg
ttgtatgaaggaccttcattagcagacaggctctgctgggagaatggatgggacatgaaa
atctctaggttgcgctgggtgcaattgtcattgcattacacaaatatcaatgatctggag
caatcgttgaatatgctcgcggaggttgatcttgcagaagaaggtgttttgcaactgcta
ttggcatctgtttatcggctattatgtagcacaagaagtgatcatgaggctgcagtgtca
tccaagttaatggttttagcagtccgctttgcaacgagaacaatcaaggcttatgggcta
cttaagcaaaagaaagacatgccagccaattcagtaaagcttcatgaaatggctttcctt
ttgggagtaattagaagtatccagggccgaatcactgcaaagaaccagaattcagtccgg
atgcaaggagatgataaaaactcactgaaaataggcaaagaagtactacaaaatgattct
ccatccccagttgttgtagtggatggtgtttcaccaggactgtcagctggtttagatgct
cctgacagacaaggatcagcatctactgcatttgagtttgttcctggtagtaacaggctg
ttagcattaacgccagttgaatcctcccttactactaatgacattgacactgatcaaaga
accactcaagttggaagaccggttactcaaggaaatatcaaggatatgatgaaccgttgg
gaaatgaataagtttgacttgaaaactatagtcggtgaagcactacaatctggtcgacta
ccgttggcagttcttcagcttcaactgttgcgccagagggaatcatgttctggtgatgat
tttgatgacgttttctccgaagttcatgaaataggaagatccattgtttatgatctgtta
atgaagggtgaaagtggactggctgtagctacactagaaagactaggagatgacatagag
tcggaccttagacaacttatgcaaggtactgtcagaaggtcacttaggctacaaatagcc
gaggagatgaaacagcgtgggtacttgcgatcaaatgagtggaagatgttggagacctta
gcactgattgagcgtttttacccaagcagcagcttctgggacacatatcttggcagggag
aacgttattcatgatgctgtaaatattgttacacttccaggggaagataaaccagtgctt
gctctccatattcgtaaccaccctgctattgaatgtggtgatgttgatggagctgtgctt
ggttcttgggtgaacgttaacgattacgctgatttaaaggagttctctcaaagcaacctt
tctgatggatattgggtgtgtgctgctgtgtggtctgatgcttgggatcaaagaactgtg
gaccgcataatactggaccagccttgtcatatctctgctcaatcggacctcccatgggaa
tctcagtttgaatattttgttgctcatgatgatgtgggggaagtctgcaaactcttggac
atgattcctgacagtgtacttctagaagggatacttagcattaatgtggacaattcacga
gctggttacagcattgtgtctgacgtcagtgtccctgattataaaatgtatatatgtgac
tcagaggagctagagcctgtttgtatggaagtaccacatgtcaaaatattcagatccttg
tctaatcatgaatcaacatcatggatgagaatgctaatgcaggaacaactggcaaagaaa
cacatctttatgaaagagtactggcaaagtactaccgaaattatacctttacttgctcga
gctggcatacttactaatacagccaagataggccccaagaaagaagcttctatgccatta
attgcttcagagatgccagatgatgaacgtcaccaggcttgtgaaagagcattgcataaa
ctagtcatccgtttttgtgtgcaatatgactctccatacctactcgatctctatctggac
aactgcaatttgattctcggggaggactctattcctttgctcaaagaagccgcaggtgat
tgcaagtgggcacaatggttactcttctccagagtcaaaggttatgagtacgaggcatcc
ttttctaacgcccgttggaatctgtcactgaaaatggttaatcatggcaatctaactgca
attgagatagatgagatattatatactgttgatgatatggctgaacggattggggaaatg
tctgcactagctaccttaatgtatgcttcaccaccaattcaaaagtccatatgcactggt
agtgtgaacagaaatcgtggattgtcttctcagtgcacgttagagaacctaggtcattgt
ctccagcaatttccaaccctatggaagacacttcgttccacctgttttgggcaagatggg
tatggctgtctaaattattctccaactaatgtttctggaaaatccgcaatgtcagattac
ttgtgctggcgctatagcattttttcctctgctggaggagacacttcattgttgcaaatg
ctcccgtgttggtttccaaagtctattagaagattaatccaactatttgaacagggccct
tttgggatgcaactgctatcgagtgcaccgtcatctgaagagttatttactcatggtgtc
actgattacatatacaataccactggatatagtgaaaccaatgcgttgtccttagaagca
tccattcaaaaaagtgttgaagaagaactatactcttcccttgaggagaaagacttgagg
gtggagcatcatttgcaccgtggtcgagcactagcagctttcaggcatcttcttggtaaa
agagcttcgcaattaaaatcggccaatgcgcgccaagtgatctccacacagtctgatgtt
caagcagatgtacaactgatcctagcccctttaagtcaaactgaacgatcagttcttcta
tcggtggctccactagctatcacaaacttcgaggactccacactggttgcttcctgcaca
ttcctgttggaactatgtggcatgtgtactaacatgctctgtctagatattgctgctctt
cagcgcatctcttcctactataactcggctcagcaaaataaacaaagtgagctatcttca
ccaaggagctctgggttacatgtgctctcccatggggctgatatagctcctgctcttgct
cgagcattagctgaagattatgtccagtctgatcatcttcagattttagagcagaagcaa
acctctaggggtcccaaaagggaacaaccatcacagcctcttattgctatactggagcac
ctggaacgagcaagtttgccattattagacgaaggtagaacctgtggattttggcttttg
agtggcattggtgatgcatctctttaccggtcgcagcaaaatgaagccagccaacattgg
aatttggttacagaattctgtctggcgcaccatctccctttaagtacaaaatatctggct
ttactggccaatgacaatgattgggttggttttctaacagaagcacagagagctggtttt
ccaattgaagttgttatcggagtggcttccaaagagataaaggactcaagattgaggact
catatactaacagttctgaaaaacacgttatcaaatagaaggaaatcgtctagcaatata
ccctcaggtagtagggacccatctttcttgtctgttgatggcgacaaccccatggaactt
ttctgcatacttgctgtttgtgaaaagcaaaagaaccctggggaggcacttctgaataaa
gcgaaacaaatgcagtggtctttattggcgttgattgcgtcatgctttccagatgtaact
cttctctcatgcttaagcttttggcttgagattacagctgcaagggagttgtccttaatc
aaggtggatggtatttcctctaaagtagctaagaatgttggatctgctgttgaggtcaca
aataaattgccaagcgtgagtaggaatgttgaatatcgttacaacaggaagaatccaaag
cggagacggttcttggaggcctctccagatagcttcaaatcaggtttttcgctggacatc
gcaagtgggccaaatggtactgcaacttccaatccttccgatattgatgctcagcaggaa
agaagaaagcccacctctgaagagactgaaattccagttgatattgatgagaggcttgca
tctttatcaagtatagtagcagtgctgtgtgaacaacagctgtttctaccattacttcga
tcctttgacttgtttctgccatcttgctcccttctccccttcattcgttctcttcaggca
ttttgtcaaatgcgcttgtccgaggcttctgcacatttgacatcattttcagcaaggata
aaagatgaagcctctcaatcaaactcattcaaagaagcatcatcaataacaggatgggta
gttgctacagctgtaaaagccgcagatgcagtactctcaacctgtccatcactttatgag
aagaggtgtttgctacagctccttgcagcggttgattttgcagatggtggttcttcgtca
gcttacttcggccgcagttattggaaaatcaatctggctgaaccgtccttatgcaaagat
ggtgatatctacaagtggaatgattccatggatgatgcttctctcctggcagcattagag
aaggatggacgatgggaggacgctcgtacttgggcaaggcaactggagtcgagtggcata
gcttgggaatctacttttgatcatgtgacggaatcacaggcagaagccatggttgccgaa
tggaaggagtttctctgggatattccacaagaacgtgcagctttgtggggccactgtcag
tcgcttttcatgagatattctttgccacctttacaggctggattatttttccttaagcat
gctgaggcattagggaaagagataccagcacgagagcttcatgaaatacttctgctatct
ttacaatggcttactggaactattactaaatcctctccggtatatcctcttcatcttctc
cgggaaattgagactagggtttggctcctggcagtcgagtcagagactcactctaaggct
gatggcgaatcttctgttgtttctcagagtccagctattggaaacagtaccagcattata
gaacagactgctgatgtcatcacaaaaatagacagtagtatgagtttgccaagcatgaaa
gctgcagaaagaaatggtatgagggacaataacttatcacaccatcaacatttgcaactc
tttgaatataacagtgaagcaacaacaacaaataatgcaagagcaaagcgaaggggcaaa
acaaatctaccacttagacgaggtgtcactgataatgttgaaagtagcaccaatgattct
gatgataattctaaagttttctttcgttctaagattggagaacaagcaagaaatttacta
tctgaagaggaatttgcaaagatggaagcgtctctgtctggttgggagcaacatgtcagg
cctgcagatatggagaaggctgtgctctccttattagaatttgggcaaataactgcagct
aagcaactccaacaaaagttatctccatcatatgttcctgaagaacttgtccttgttgat
gttgcgttaagagttgcaaataacggcggtgatggagagatcaatttattatcctttgac
acagaagccctttcaatacttcaatctctccagattgcaagtggcagcaatatgattgat
ccatcacaggctatggagaaattagccgtgaaatgtggcgaggggcgcggacgggctctt
attaggagaataatagcagttgtgcaaactgcaaaaatactgggactcccattttctgaa
gcatttgagaaacagccaattgaacttctgcagttgctttcactgaaagctcaggattct
tttgatgaagctaaatttctggtggagacacacatcatgcctgcatctagcattgcaaga
attcttgctgattcctttctgaaggggcttttagctgcacatcgtggaggttatctggac
tcccaaaaagaagaaggccctgcaccactattgtggagatcaagtgacttcttgaagtgg
gcaaaactatgcccatcagaaccagaaattggccacgctttaatgcgtttggtaatgact
gggcatgaagtaccgcatgcttgtgaggttgaactccttatactgtcacatcacttctac
atgtcatcttcttgtcttgatggtgtggatgttctcgtcacatttgcagccaatagagtg
gattcatatgtttcagagggggatttttcttgcttagctcgcttgataactggagtgagc
aattttcactccttgagcttcatcctttccatccttatagaaaatggccaattggagttg
ctacttcaaaagtattcttccactgacacagccacagtggcacctgcatcagttcgaggg
tttaggttggctgttattacatcactgaaacatttcaacccaaatgatgatgaagctctg
tctctggtatacaagcactttgacatgaaacatgaggcggcttccctccttgagtcgcgt
gcagagcagtacatggaaagctggttagatcggcatgataaggaacgacggaatgatgag
ctccttaaggctatgcataaccttgtacagacggctgagattctttcaacaattgacgct
ggccaaaggacacatcgtgcttgcgctcgtgcttctctcctatctcttcagatccgaata
cctgatcttgtatggattggtcttacagaaaccaatgcgcgccgaattttcgtggatcaa
tctaggttccaggaggccctcattgttgctgaagcatatagcataaatcagccaatggaa
tgggcaccagtcttctggaaccagatgctgaagcccgacctcatcgagctatttgtggct
gaatttgtactagttctgcccctgcatccaccaatgctcgtggagcttgcgagattttac
cgggcagaggttgcagccaggggcgaccagtcgcacttctcagtctggctttcgcctgga
ggcttgcctgctgaatggggaaagcatctcggcagatcattcaggagcctgctgcgtcga
acgagggatatgaggctgaggctgcagttggcaactctggcgactgggttcagcgatgtc
cttgagggctgcaatgcggttctggacaaggtccctgagaacgccgggccactgatactg
aggaagggccatgggggtgcatacctccctctcatgtaa
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integrated database retrieval system
