Triticum aestivum (bread wheat): 123078062
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Entry
123078062 CDS
T07757
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123078062
09123 Folding, sorting and degradation
03018 RNA degradation
123078062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123078062
03041 Spliceosome [BR:
taes03041
]
123078062
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123078062
mRNA degradation factors
5'-3' decay
Lsm complex
123078062
Spliceosome [BR:
taes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123078062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
123078062
NCBI-ProteinID:
XP_044356386
LinkDB
All DBs
Position
3D:complement(164914595..164918956)
Genome browser
AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGRGRGRGDIGTKPGGRGIGRGQDDG
KGGGRGRGGIGSKGGNKGGRGRG
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctcgctcctcaagaccgcccaggggcatcccatgctcgtggagctcaag
aacggcgagacctacaatggtcacttggtgaactgcgacacgtggatgaacatccacctc
cgggaggttatttgcacctcgaaggatggtgataagttttggaggatgccggagtgctat
attcgtgggaacacaatcaagtatcttcgggttcctgatgaggtgattgacaaggttcaa
gaggaaacttctaagagtagatcagataggaagccaccaggtgttggccgcggaagagga
agaggagacatcggcactaagcccgggggcagaggaatcgggcgtggccaagatgatggc
aaaggtggtggccgtggaaggggtgggattggaagtaaaggtggcaacaaaggcggacgt
ggtcgtgggtaa
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